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CBS51388_005647-T1, CBS51388_005647-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005647-T1
Unique NameCBS51388_005647-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2138378..2139853-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005647-T1 ID=CBS51388_005647-T1|Name=CBS51388_005647-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1476bp|location=Sequence derived from alignment at An08:2138378..2139853- (Aspergillus niger CBS 513.88)
ATGGCTGATGATACCGCCGCGGCCGAGGATGCGCACATCACTTTCAACGT
GAAGTCATCCAATGATGCTAAATATACACTCACTCTGCCATCATCAACCT
CGGTCTCTGATCTGAAAGAGAAGCTAGCGTCTTCGGAATATGCTGATACC
CCAGCTGAGCGCCAGCGTCTGATCTACTCGGGCAGAGTCCTCAAAGACAA
TGAAACCCTGGCAACGTACAACATCAAGGATGGACACACTATTCACCTGG
TGAAGAGTGCACCCAGCAACCGGCCCCCTAGTGGTGCTGCGACGACGACG
TCAACATCCGCACCTGGTGGTGCGGCTGCAACTCCTGCGGCTGCAGGCGT
CCCCACGAATCTCGCTGCCGGCACGGGCAATAACCCGCTCGCGGGGTTGA
CGGGAGCCAGATATGCCGGGTTCGCGCAACTGCCAGGTGCAGGAATGTTC
GGGCCTGATGGCGGGGTAAGTCGTTTGCCTTGATGTTGTCCTGACAGGCT
TCTTGTGTCATCGACAAACCAACTAATACGCTGTTTCTAGATGGGCCCTC
CTCCTGACACGGAAACCATGCTCAACATGCTCGAAAACCCTCAATTTCAG
TCTACGATCAACGAAGCTCTGCAAAACCCCGCCATGATTGACATGATGAT
CCAACAGAACCCCATGCTGCGCGAAATGGGTCCTGGCGTACGGCAGATGA
TGCAGAGCCCGGAATTCCGCCGCATGCTCACCGACCCCAACTCGATACGT
CAGATGGTACAGATGCAGAGAGCCATGGGTGGCGGGGGCCTTGGTGGAGG
CGCATTTCCCGCTCCTGGGGTTACCAACACAACACCCGAGGAAAACAGAG
ACGCTCAGAACAATACCGGTACCACGCCCACTCCTGGCGCCGCGTTCAAC
CCTTTTATGCCGGCCGGTCTCGGCGCTGGAAATCCTTTCGCAGCCCTTTT
TGGAGGCAATCCCATGATGGGCAACCCTGCTGCAGGAGCGACTCCGTCGG
GCGCTTCACCCACCGCTGGCGGAACTCAACCGGACAGCACCGAGCGAGCC
GCTGGGGGTGATAACGCTACGGGACAAGGACAGAACCAGCAGGGCTTCCA
GAATCCGTTCAGCATGTTCATGAACCCAGCGCTCTTTGGCGGCCAAGGCG
GTCAGGCTGGTGCGAACCCTTTCAATCCGCAACAGAATCCTTTCCTCCGG
GACCCAGCACTGCTGCAACAATGGATGCAGAACCTAGGTGCCGCACCGGG
AGAAGGAGGCGCGGCTGGTACCAATCCTCTGGCGGCACTGTTTGGTGGTG
GATTTGGCAGCCCCCCTCCGCAAGATAACCGGCCCCCCGAGGAACGGTAT
GCAGAGCAGCTTCGTCAATTGAACGACATGGGATTTTTCGAGTTTGAGAG
GAATATCGAGGCTCTTCGCCGAGCAGGAGGCAGCGTGCAAGGGGCAGTGG
AGTATCTATTGAGCCACCCCTCTTAA
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Coding sequence (CDS) from alignment at An08:2138378..2139853-

>CBS51388_005647-T1 ID=CBS51388_005647-T1|Name=CBS51388_005647-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2802bp|location=Sequence derived from alignment at An08:2138378..2139853- (Aspergillus niger CBS 513.88)
ATGGGCCCTCCTCCTGACACGGAAACCATGCTCAACATGCTCGAAAACCC
TCAATTTCAGTCTACGATCAACGAAGCTCTGCAAAACCCCGCCATGATTG
ACATGATGATCCAACAGAACCCCATGCTGCGCGAAATGGGTCCTGGCGTA
CGGCAGATGATGCAGAGCCCGGAATTCCGCCGCATGCTCACCGACCCCAA
CTCGATACGTCAGATGGTACAGATGCAGAGAGCCATGGGTGGCGGGGGCC
TTGGTGGAGGCGCATTTCCCGCTCCTGGGGTTACCAACACAACACCCGAG
GAAAACAGAGACGCTCAGAACAATACCGGTACCACGCCCACTCCTGGCGC
CGCGTTCAACCCTTTTATGCCGGCCGGTCTCGGCGCTGGAAATCCTTTCG
CAGCCCTTTTTGGAGGCAATCCCATGATGGGCAACCCTGCTGCAGGAGCG
ACTCCGTCGGGCGCTTCACCCACCGCTGGCGGAACTCAACCGGACAGCAC
CGAGCGAGCCGCTGGGGGTGATAACGCTACGGGACAAGGACAGAACCAGC
AGGGCTTCCAGAATCCGTTCAGCATGTTCATGAACCCAGCGCTCTTTGGC
GGCCAAGGCGGTCAGGCTGGTGCGAACCCTTTCAATCCGCAACAGAATCC
TTTCCTCCGGGACCCAGCACTGCTGCAACAATGGATGCAGAACCTAGGTG
CCGCACCGGGAGAAGGAGGCGCGGCTGGTACCAATCCTCTGGCGGCACTG
TTTGGTGGTGGATTTGGCAGCCCCCCTCCGCAAGATAACCGGCCCCCCGA
GGAACGGTATGCAGAGCAGCTTCGTCAATTGAACGACATGGGATTTTTCG
AGTTTGAGAGGAATATCGAGGCTCTTCGCCGAGCAGGAGGCAGCGTGCAA
GGGGCAGTGGAGTATCTATTGAGCCACCCCTCTTAAATGGCTGATGATAC
CGCCGCGGCCGAGGATGCGCACATCACTTTCAACGTGAAGTCATCCAATG
ATGCTAAATATACACTCACTCTGCCATCATCAACCTCGGTCTCTGATCTG
AAAGAGAAGCTAGCGTCTTCGGAATATGCTGATACCCCAGCTGAGCGCCA
GCGTCTGATCTACTCGGGCAGAGTCCTCAAAGACAATGAAACCCTGGCAA
CGTACAACATCAAGGATGGACACACTATTCACCTGGTGAAGAGTGCACCC
AGCAACCGGCCCCCTAGTGGTGCTGCGACGACGACGTCAACATCCGCACC
TGGTGGTGCGGCTGCAACTCCTGCGGCTGCAGGCGTCCCCACGAATCTCG
CTGCCGGCACGGGCAATAACCCGCTCGCGGGGTTGACGGGAGCCAGATAT
GCCGGGTTCGCGCAACTGCCAGGTGCAGGAATGTTCGGGCCTGATGGCGG
GATGGGCCCTCCTCCTGACACGGAAACCATGCTCAACATGCTCGAAAACC
CTCAATTTCAGTCTACGATCAACGAAGCTCTGCAAAACCCCGCCATGATT
GACATGATGATCCAACAGAACCCCATGCTGCGCGAAATGGGTCCTGGCGT
ACGGCAGATGATGCAGAGCCCGGAATTCCGCCGCATGCTCACCGACCCCA
ACTCGATACGTCAGATGGTACAGATGCAGAGAGCCATGGGTGGCGGGGGC
CTTGGTGGAGGCGCATTTCCCGCTCCTGGGGTTACCAACACAACACCCGA
GGAAAACAGAGACGCTCAGAACAATACCGGTACCACGCCCACTCCTGGCG
CCGCGTTCAACCCTTTTATGCCGGCCGGTCTCGGCGCTGGAAATCCTTTC
GCAGCCCTTTTTGGAGGCAATCCCATGATGGGCAACCCTGCTGCAGGAGC
GACTCCGTCGGGCGCTTCACCCACCGCTGGCGGAACTCAACCGGACAGCA
CCGAGCGAGCCGCTGGGGGTGATAACGCTACGGGACAAGGACAGAACCAG
CAGGGCTTCCAGAATCCGTTCAGCATGTTCATGAACCCAGCGCTCTTTGG
CGGCCAAGGCGGTCAGGCTGGTGCGAACCCTTTCAATCCGCAACAGAATC
CTTTCCTCCGGGACCCAGCACTGCTGCAACAATGGATGCAGAACCTAGGT
GCCGCACCGGGAGAAGGAGGCGCGGCTGGTACCAATCCTCTGGCGGCACT
GTTTGGTGGTGGATTTGGCAGCCCCCCTCCGCAAGATAACCGGCCCCCCG
AGGAACGGTATGCAGAGCAGCTTCGTCAATTGAACGACATGGGATTTTTC
GAGTTTGAGAGGAATATCGAGGCTCTTCGCCGAGCAGGAGGCAGCGTGCA
AGGGGCAGTGGAGTATCTATTGAGCCACCCCTCTTAAATGGCTGATGATA
CCGCCGCGGCCGAGGATGCGCACATCACTTTCAACGTGAAGTCATCCAAT
GATGCTAAATATACACTCACTCTGCCATCATCAACCTCGGTCTCTGATCT
GAAAGAGAAGCTAGCGTCTTCGGAATATGCTGATACCCCAGCTGAGCGCC
AGCGTCTGATCTACTCGGGCAGAGTCCTCAAAGACAATGAAACCCTGGCA
ACGTACAACATCAAGGATGGACACACTATTCACCTGGTGAAGAGTGCACC
CAGCAACCGGCCCCCTAGTGGTGCTGCGACGACGACGTCAACATCCGCAC
CTGGTGGTGCGGCTGCAACTCCTGCGGCTGCAGGCGTCCCCACGAATCTC
GCTGCCGGCACGGGCAATAACCCGCTCGCGGGGTTGACGGGAGCCAGATA
TGCCGGGTTCGCGCAACTGCCAGGTGCAGGAATGTTCGGGCCTGATGGCG
GG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005647CBS51388_005647Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005647-T1CBS51388_005647-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005647-T1.cdsCBS51388_005647-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005647-T1.exon2CBS51388_005647-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005647-T1.exon1CBS51388_005647-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09264JQ1
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR006636
DBxrefInterPro:IPR015940
DBxrefInterPro:IPR000626
DBxrefPFAM:PF00240
DBxrefPFAM:PF00627
DBxrefPFAM:PF13881
DBxrefPFAM:PF11976
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2138378..2139853 -
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