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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2186768..2187838+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005661-T1 ID=CBS51388_005661-T1|Name=CBS51388_005661-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1071bp|location=Sequence derived from alignment at An08:2186768..2187838+ (Aspergillus niger CBS 513.88)
ATGAAGACTGCTGAATTCGAGTTCGATCTTGACTACAAGGTCATGCCCCA
TGACCCTGTTGAGCTTCGCGGCAAAACCCGTGATAGCGGAAAGATGATTG
TCTTAGATCGCGAAAGCTCTAAAATCGATCATGCTATATTCTCCAGCATT
GGAGAATACTTCCGCCCCGGAGACCTCCTCGTGCTGAACGATAGCTACAT
GCTGTCAAACACGCTGTGGTTTGAGCATGGCAACAAGGACTCCCTGCAAC
TGACCGTCTACGGTCACGAGCCAGACGGCACCACCATCGTTGAGCTCAAG
AAGCCCGAGGTCACGTTCAAACGAGCCCAAACCCTGACCTCGCTGGATGA
GGAGAAGCTCAAATGCACGCTCCTTGACCAGCAGCCCGATAAGCTGTGGA
AGGTCCAGTTCACCCCAACTGAGCTGCTCCTCCCAACCCTCGATCAATAC
GGAGCCCGGCTCGACGAAAACATCCATTTGAACCCTACTTACTGGAAAGA
AAAGCCCGATGCTTACCGCTCTGTGTATGCCAAAAAGCCCGGTTCTCTCG
AGATCCCTTCGGCTGGACTGCATTTCTCTCATGAGCTCCTCGCTGAAATC
TCCGCCAAGGGTGTTGAGATCGCCTACATCACTCTGCATGTGGGGGCGAC
TGAGATTCTGTCCGTTCGGCACATCAGCGTCGAGGAGATTGAAAAACACA
AGGTGCGATCGGAGTATTACGAGGTCAGCGAAAGGACTTCAGCGCAGCTG
AATCGAGCAAGAAGCGAAGGTCGTCGTGTCATTGCTGTTGGCACGACTGT
TATGCGGACGCTGGAGACCATTACCCGTGAGACCGGACGCAAGGGTACCA
TCAAGCCCCAGCATGGATGGACCGATCTCTATATCTACCCGGGATTTGAG
TTCAATGCTGTGGATGTGCTGCTTACCAATTTGCATCGTCCGCGGTCTAG
TCATATTGTGCTTACGGCTGCTTTCGCGGGGACCGACTTTGTTATGAGAA
GCTACAAGGAAATTCAGGAGAAGGGTGATTATGAGTTTGATATGTTCGGG
GATTGTATGCTTATTACTTAG back to topCoding sequence (CDS) from alignment at An08:2186768..2187838+ >CBS51388_005661-T1 ID=CBS51388_005661-T1|Name=CBS51388_005661-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1071bp|location=Sequence derived from alignment at An08:2186768..2187838+ (Aspergillus niger CBS 513.88)
ATGAAGACTGCTGAATTCGAGTTCGATCTTGACTACAAGGTCATGCCCCA
TGACCCTGTTGAGCTTCGCGGCAAAACCCGTGATAGCGGAAAGATGATTG
TCTTAGATCGCGAAAGCTCTAAAATCGATCATGCTATATTCTCCAGCATT
GGAGAATACTTCCGCCCCGGAGACCTCCTCGTGCTGAACGATAGCTACAT
GCTGTCAAACACGCTGTGGTTTGAGCATGGCAACAAGGACTCCCTGCAAC
TGACCGTCTACGGTCACGAGCCAGACGGCACCACCATCGTTGAGCTCAAG
AAGCCCGAGGTCACGTTCAAACGAGCCCAAACCCTGACCTCGCTGGATGA
GGAGAAGCTCAAATGCACGCTCCTTGACCAGCAGCCCGATAAGCTGTGGA
AGGTCCAGTTCACCCCAACTGAGCTGCTCCTCCCAACCCTCGATCAATAC
GGAGCCCGGCTCGACGAAAACATCCATTTGAACCCTACTTACTGGAAAGA
AAAGCCCGATGCTTACCGCTCTGTGTATGCCAAAAAGCCCGGTTCTCTCG
AGATCCCTTCGGCTGGACTGCATTTCTCTCATGAGCTCCTCGCTGAAATC
TCCGCCAAGGGTGTTGAGATCGCCTACATCACTCTGCATGTGGGGGCGAC
TGAGATTCTGTCCGTTCGGCACATCAGCGTCGAGGAGATTGAAAAACACA
AGGTGCGATCGGAGTATTACGAGGTCAGCGAAAGGACTTCAGCGCAGCTG
AATCGAGCAAGAAGCGAAGGTCGTCGTGTCATTGCTGTTGGCACGACTGT
TATGCGGACGCTGGAGACCATTACCCGTGAGACCGGACGCAAGGGTACCA
TCAAGCCCCAGCATGGATGGACCGATCTCTATATCTACCCGGGATTTGAG
TTCAATGCTGTGGATGTGCTGCTTACCAATTTGCATCGTCCGCGGTCTAG
TCATATTGTGCTTACGGCTGCTTTCGCGGGGACCGACTTTGTTATGAGAA
GCTACAAGGAAATTCAGGAGAAGGGTGATTATGAGTTTGATATGTTCGGG
GATTGTATGCTTATTACTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008616 | queuosine biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016853 | isomerase activity |
| GO:0016740 | transferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.5 |
| DBxref | InterPro:IPR036100 |
| DBxref | InterPro:IPR042118 |
| DBxref | InterPro:IPR042119 |
| DBxref | InterPro:IPR003699 |
| DBxref | PFAM:PF02547 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2186768..2187838 + |
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