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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2193762..2195490+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005664-T1 ID=CBS51388_005664-T1|Name=CBS51388_005664-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1729bp|location=Sequence derived from alignment at An08:2193762..2195490+ (Aspergillus niger CBS 513.88)
ATGCCTGCTCGTATGTATCAAAGCCACAATCGCCGGCTTCGCCCCTAGAG
TCGAATCGCATAGTCAAAGCCAGCCGCAACAGTGGCTCCAGGTTGTCTTC
GTCGACACTGGCTCGAATTAATCCCGGTCTGCAGCGACTGGCCAAATTCA
TGGAGCAAGCGAAAGCATATGAGGCATCCTCATCGCACAGTCCCTCCTCG
TCGTCTCCGGACTCCTTCTCGTCTACATCGACAACGCAACCGACACCAGC
AGCCAACACTTCCGCCCCTCCCCACAATCCGCGATCGGAGGAAGATGCCC
TCATCCTGGATAACGGAGTCCCCCACTTTGTTTCCGGCAAACACTGGGCC
TGGATGGCAGCAGAGGTGCGCTTCACAGCATGCGGCTCGCGTGAATAACA
GGAGTGAGAGCACAGAATGCTAACATAGTCTCACTGTTTCCTTTTCCCTC
TTTATAGCTCCAAGACATCCAATCAGTTCTCACGGAATCTCAAAAGTCCT
CTTCTCCGGAAGGGACACTTGACGATGTTATTTGGGAGGCCGATTCACCT
GCCAAGGCATCATTTAGTAACATTAGCAACAACTTCTGGCCTGATACCCG
GGAAGATTGTTACTTGCTGTTGAATGTGTACCTGGCCAATGTCGACCCGA
TAGTTCGCATTATCCACCGGCCAAGCTTGGCCCGTCGCTTTGACGCCTTC
GTGCGCTCTCAATATCCTGACAGTCGAGATTACACACCGACCCAAGGGGG
AGACAGCAACGGCGGTACGAGCTGCGGTCCGACAAAGATTGACGCCTTCC
AACCACTGGTCATGTCTATCTTCTACGCGGCTGTCAACAGTATAAAGGAT
ACAGACGTAGCCACCATGTTCGGTATGGACAAAGTCTCTCTTCTGAATCG
GTATCGGATGGGAACAGAGATGCTTCTCAAGCGCCAAAAATTTATGACCT
CGAGGATCTTTGAGGTTCTGCAGGCATTTGTGATATTATTGGTAAGGAAC
CCATAAAGAAATTCAAAAACCAATCGCTATTCTAATCTTAATTCATGGCT
ATAGACTGCGCAATACAGAGAAGATGACATGGGCAAAGTGTGGCCATTGA
CAGGCCTGGCCATTCGGATTGCAATGCTTCAGGGACTCCACAGGGACCCC
CTAGCCCTACCACTCGGAACGATCGACGTCGTACAGGTGGAGCTGCGCCG
TCGCCTGTGGGCTCAGATCTGCTATCTGGATTTCCGGACTGCGGAAGATC
ACGGATTCGCGCCGTCAATCCACGCATCGGACTTCGATACGCGTCGGCCC
GTCAGTCTGGACGATGTGGATCTGATTGAAGGCGTGGCCCCCTTGGCCGG
GCTCTCTGATGCCTCTAAATTCACCGATATGACCATCTACCTTCTGCGCA
TCACAGCCGCCGGTTACTACGGGCACATCATCCAGATAACGCATGCATCA
CGCAAGCGTTTGCGTAACGGCTTGAATGGTTCGGTTATTGACGAGTCCCA
ATCTTTGGTGAAGCTACAAGAACTGTTGCAGACCGCCACTGGGCTTGCAG
GTGAGTTAGAGAGGGGCCTCGACGAGCTGGTTCGGTACTGCGATAAGAGG
GTGGTTATGCAATCGATGGCTTTGGATCTTAGCCAGCACCTCAAGACTAA
ATTCTGGGTTATGTTCTGGATGCAGATCCCACGACAGAATCGCGAGAAAA
TTATAAGTCCTGCTATGAGACGAAAGTGA back to topCoding sequence (CDS) from alignment at An08:2193762..2195490+ >CBS51388_005664-T1 ID=CBS51388_005664-T1|Name=CBS51388_005664-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6084bp|location=Sequence derived from alignment at An08:2193762..2195490+ (Aspergillus niger CBS 513.88)
ATGCCTGCTCTCAAAGCCAGCCGCAACAGTGGCTCCAGGTTGTCTTCGTC
GACACTGGCTCGAATTAATCCCGGTCTGCAGCGACTGGCCAAATTCATGG
AGCAAGCGAAAGCATATGAGGCATCCTCATCGCACAGTCCCTCCTCGTCG
TCTCCGGACTCCTTCTCGTCTACATCGACAACGCAACCGACACCAGCAGC
CAACACTTCCGCCCCTCCCCACAATCCGCGATCGGAGGAAGATGCCCTCA
TCCTGGATAACGGAGTCCCCCACTTTGTTTCCGGCAAACACTGGGCCTGG
ATGGCAGCAGAGCTCCAAGACATCCAATCAGTTCTCACGGAATCTCAAAA
GTCCTCTTCTCCGGAAGGGACACTTGACGATGTTATTTGGGAGGCCGATT
CACCTGCCAAGGCATCATTTAGTAACATTAGCAACAACTTCTGGCCTGAT
ACCCGGGAAGATTGTTACTTGCTGTTGAATGTGTACCTGGCCAATGTCGA
CCCGATAGTTCGCATTATCCACCGGCCAAGCTTGGCCCGTCGCTTTGACG
CCTTCGTGCGCTCTCAATATCCTGACAGTCGAGATTACACACCGACCCAA
GGGGGAGACAGCAACGGCGGTACGAGCTGCGGTCCGACAAAGATTGACGC
CTTCCAACCACTGGTCATGTCTATCTTCTACGCGGCTGTCAACAGTATAA
AGGATACAGACGTAGCCACCATGTTCGGTATGGACAAAGTCTCTCTTCTG
AATCGGTATCGGATGGGAACAGAGATGCTTCTCAAGCGCCAAAAATTTAT
GACCTCGAGGATCTTTGAGGTTCTGCAGGCATTTGTGATATTATTGACTG
CGCAATACAGAGAAGATGACATGGGCAAAGTGTGGCCATTGACAGGCCTG
GCCATTCGGATTGCAATGCTTCAGGGACTCCACAGGGACCCCCTAGCCCT
ACCACTCGGAACGATCGACGTCGTACAGGTGGAGCTGCGCCGTCGCCTGT
GGGCTCAGATCTGCTATCTGGATTTCCGGACTGCGGAAGATCACGGATTC
GCGCCGTCAATCCACGCATCGGACTTCGATACGCGTCGGCCCGTCAGTCT
GGACGATGTGGATCTGATTGAAGGCGTGGCCCCCTTGGCCGGGCTCTCTG
ATGCCTCTAAATTCACCGATATGACCATCTACCTTCTGCGCATCACAGCC
GCCGGTTACTACGGGCACATCATCCAGATAACGCATGCATCACGCAAGCG
TTTGCGTAACGGCTTGAATGGTTCGGTTATTGACGAGTCCCAATCTTTGG
TGAAGCTACAAGAACTGTTGCAGACCGCCACTGGGCTTGCAGGTGAGTTA
GAGAGGGGCCTCGACGAGCTGGTTCGGTACTGCGATAAGAGGGTGGTTAT
GCAATCGATGGCTTTGGATCTTAGCCAGCACCTCAAGACTAAATTCTGGG
TTATGTTCTGGATGCAGATCCCACGACAGAATCGCGAGAAAATTATAAGT
CCTGCTATGAGACGAAAGTGAATGCCTGCTCTCAAAGCCAGCCGCAACAG
TGGCTCCAGGTTGTCTTCGTCGACACTGGCTCGAATTAATCCCGGTCTGC
AGCGACTGGCCAAATTCATGGAGCAAGCGAAAGCATATGAGGCATCCTCA
TCGCACAGTCCCTCCTCGTCGTCTCCGGACTCCTTCTCGTCTACATCGAC
AACGCAACCGACACCAGCAGCCAACACTTCCGCCCCTCCCCACAATCCGC
GATCGGAGGAAGATGCCCTCATCCTGGATAACGGAGTCCCCCACTTTGTT
TCCGGCAAACACTGGGCCTGGATGGCAGCAGAGCTCCAAGACATCCAATC
AGTTCTCACGGAATCTCAAAAGTCCTCTTCTCCGGAAGGGACACTTGACG
ATGTTATTTGGGAGGCCGATTCACCTGCCAAGGCATCATTTAGTAACATT
AGCAACAACTTCTGGCCTGATACCCGGGAAGATTGTTACTTGCTGTTGAA
TGTGTACCTGGCCAATGTCGACCCGATAGTTCGCATTATCCACCGGCCAA
GCTTGGCCCGTCGCTTTGACGCCTTCGTGCGCTCTCAATATCCTGACAGT
CGAGATTACACACCGACCCAAGGGGGAGACAGCAACGGCGGTACGAGCTG
CGGTCCGACAAAGATTGACGCCTTCCAACCACTGGTCATGTCTATCTTCT
ACGCGGCTGTCAACAGTATAAAGGATACAGACGTAGCCACCATGTTCGGT
ATGGACAAAGTCTCTCTTCTGAATCGGTATCGGATGGGAACAGAGATGCT
TCTCAAGCGCCAAAAATTTATGACCTCGAGGATCTTTGAGGTTCTGCAGG
CATTTGTGATATTATTGACTGCGCAATACAGAGAAGATGACATGGGCAAA
GTGTGGCCATTGACAGGCCTGGCCATTCGGATTGCAATGCTTCAGGGACT
CCACAGGGACCCCCTAGCCCTACCACTCGGAACGATCGACGTCGTACAGG
TGGAGCTGCGCCGTCGCCTGTGGGCTCAGATCTGCTATCTGGATTTCCGG
ACTGCGGAAGATCACGGATTCGCGCCGTCAATCCACGCATCGGACTTCGA
TACGCGTCGGCCCGTCAGTCTGGACGATGTGGATCTGATTGAAGGCGTGG
CCCCCTTGGCCGGGCTCTCTGATGCCTCTAAATTCACCGATATGACCATC
TACCTTCTGCGCATCACAGCCGCCGGTTACTACGGGCACATCATCCAGAT
AACGCATGCATCACGCAAGCGTTTGCGTAACGGCTTGAATGGTTCGGTTA
TTGACGAGTCCCAATCTTTGGTGAAGCTACAAGAACTGTTGCAGACCGCC
ACTGGGCTTGCAGGTGAGTTAGAGAGGGGCCTCGACGAGCTGGTTCGGTA
CTGCGATAAGAGGGTGGTTATGCAATCGATGGCTTTGGATCTTAGCCAGC
ACCTCAAGACTAAATTCTGGGTTATGTTCTGGATGCAGATCCCACGACAG
AATCGCGAGAAAATTATAAGTCCTGCTATGAGACGAAAGTGAATGCCTGC
TCTCAAAGCCAGCCGCAACAGTGGCTCCAGGTTGTCTTCGTCGACACTGG
CTCGAATTAATCCCGGTCTGCAGCGACTGGCCAAATTCATGGAGCAAGCG
AAAGCATATGAGGCATCCTCATCGCACAGTCCCTCCTCGTCGTCTCCGGA
CTCCTTCTCGTCTACATCGACAACGCAACCGACACCAGCAGCCAACACTT
CCGCCCCTCCCCACAATCCGCGATCGGAGGAAGATGCCCTCATCCTGGAT
AACGGAGTCCCCCACTTTGTTTCCGGCAAACACTGGGCCTGGATGGCAGC
AGAGCTCCAAGACATCCAATCAGTTCTCACGGAATCTCAAAAGTCCTCTT
CTCCGGAAGGGACACTTGACGATGTTATTTGGGAGGCCGATTCACCTGCC
AAGGCATCATTTAGTAACATTAGCAACAACTTCTGGCCTGATACCCGGGA
AGATTGTTACTTGCTGTTGAATGTGTACCTGGCCAATGTCGACCCGATAG
TTCGCATTATCCACCGGCCAAGCTTGGCCCGTCGCTTTGACGCCTTCGTG
CGCTCTCAATATCCTGACAGTCGAGATTACACACCGACCCAAGGGGGAGA
CAGCAACGGCGGTACGAGCTGCGGTCCGACAAAGATTGACGCCTTCCAAC
CACTGGTCATGTCTATCTTCTACGCGGCTGTCAACAGTATAAAGGATACA
GACGTAGCCACCATGTTCGGTATGGACAAAGTCTCTCTTCTGAATCGGTA
TCGGATGGGAACAGAGATGCTTCTCAAGCGCCAAAAATTTATGACCTCGA
GGATCTTTGAGGTTCTGCAGGCATTTGTGATATTATTGACTGCGCAATAC
AGAGAAGATGACATGGGCAAAGTGTGGCCATTGACAGGCCTGGCCATTCG
GATTGCAATGCTTCAGGGACTCCACAGGGACCCCCTAGCCCTACCACTCG
GAACGATCGACGTCGTACAGGTGGAGCTGCGCCGTCGCCTGTGGGCTCAG
ATCTGCTATCTGGATTTCCGGACTGCGGAAGATCACGGATTCGCGCCGTC
AATCCACGCATCGGACTTCGATACGCGTCGGCCCGTCAGTCTGGACGATG
TGGATCTGATTGAAGGCGTGGCCCCCTTGGCCGGGCTCTCTGATGCCTCT
AAATTCACCGATATGACCATCTACCTTCTGCGCATCACAGCCGCCGGTTA
CTACGGGCACATCATCCAGATAACGCATGCATCACGCAAGCGTTTGCGTA
ACGGCTTGAATGGTTCGGTTATTGACGAGTCCCAATCTTTGGTGAAGCTA
CAAGAACTGTTGCAGACCGCCACTGGGCTTGCAGGTGAGTTAGAGAGGGG
CCTCGACGAGCTGGTTCGGTACTGCGATAAGAGGGTGGTTATGCAATCGA
TGGCTTTGGATCTTAGCCAGCACCTCAAGACTAAATTCTGGGTTATGTTC
TGGATGCAGATCCCACGACAGAATCGCGAGAAAATTATAAGTCCTGCTAT
GAGACGAAAGTGAATGCCTGCTCTCAAAGCCAGCCGCAACAGTGGCTCCA
GGTTGTCTTCGTCGACACTGGCTCGAATTAATCCCGGTCTGCAGCGACTG
GCCAAATTCATGGAGCAAGCGAAAGCATATGAGGCATCCTCATCGCACAG
TCCCTCCTCGTCGTCTCCGGACTCCTTCTCGTCTACATCGACAACGCAAC
CGACACCAGCAGCCAACACTTCCGCCCCTCCCCACAATCCGCGATCGGAG
GAAGATGCCCTCATCCTGGATAACGGAGTCCCCCACTTTGTTTCCGGCAA
ACACTGGGCCTGGATGGCAGCAGAGCTCCAAGACATCCAATCAGTTCTCA
CGGAATCTCAAAAGTCCTCTTCTCCGGAAGGGACACTTGACGATGTTATT
TGGGAGGCCGATTCACCTGCCAAGGCATCATTTAGTAACATTAGCAACAA
CTTCTGGCCTGATACCCGGGAAGATTGTTACTTGCTGTTGAATGTGTACC
TGGCCAATGTCGACCCGATAGTTCGCATTATCCACCGGCCAAGCTTGGCC
CGTCGCTTTGACGCCTTCGTGCGCTCTCAATATCCTGACAGTCGAGATTA
CACACCGACCCAAGGGGGAGACAGCAACGGCGGTACGAGCTGCGGTCCGA
CAAAGATTGACGCCTTCCAACCACTGGTCATGTCTATCTTCTACGCGGCT
GTCAACAGTATAAAGGATACAGACGTAGCCACCATGTTCGGTATGGACAA
AGTCTCTCTTCTGAATCGGTATCGGATGGGAACAGAGATGCTTCTCAAGC
GCCAAAAATTTATGACCTCGAGGATCTTTGAGGTTCTGCAGGCATTTGTG
ATATTATTGACTGCGCAATACAGAGAAGATGACATGGGCAAAGTGTGGCC
ATTGACAGGCCTGGCCATTCGGATTGCAATGCTTCAGGGACTCCACAGGG
ACCCCCTAGCCCTACCACTCGGAACGATCGACGTCGTACAGGTGGAGCTG
CGCCGTCGCCTGTGGGCTCAGATCTGCTATCTGGATTTCCGGACTGCGGA
AGATCACGGATTCGCGCCGTCAATCCACGCATCGGACTTCGATACGCGTC
GGCCCGTCAGTCTGGACGATGTGGATCTGATTGAAGGCGTGGCCCCCTTG
GCCGGGCTCTCTGATGCCTCTAAATTCACCGATATGACCATCTACCTTCT
GCGCATCACAGCCGCCGGTTACTACGGGCACATCATCCAGATAACGCATG
CATCACGCAAGCGTTTGCGTAACGGCTTGAATGGTTCGGTTATTGACGAG
TCCCAATCTTTGGTGAAGCTACAAGAACTGTTGCAGACCGCCACTGGGCT
TGCAGGTGAGTTAGAGAGGGGCCTCGACGAGCTGGTTCGGTACTGCGATA
AGAGGGTGGTTATGCAATCGATGGCTTTGGATCTTAGCCAGCACCTCAAG
ACTAAATTCTGGGTTATGTTCTGGATGCAGATCCCACGACAGAATCGCGA
GAAAATTATAAGTCCTGCTATGAGACGAAAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.5 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2193762..2195490 + |
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