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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2205094..2205897- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005670-T1 ID=CBS51388_005670-T1|Name=CBS51388_005670-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=804bp|location=Sequence derived from alignment at An08:2205094..2205897- (Aspergillus niger CBS 513.88)
ATGCCTCCCTCTTCTTGGCCAGACAGTGCAAAAGCTGCAGTGAGCATCAC
ATTTGATAATGTGGGTGAATCAAGAGACGTCGGAGTAGGAGCATGGCCGA
AGGAGAAACCCGTGGGACAGCATCCGTCGGTACTGGAGGTGACCCCAATT
ATTCTCGACATTCTTGACAAGCACGACGTGAAAGTGACATATTTCATGGA
AGCATGGGGTATTCAGACGTACCCAAAGATGCTCAGCGAGGTCCAGAGTC
GTGGCCATGAAATTGGATATCACGCATATCAGCACGAGGAGTGGAAAACG
CTGTCACCCCTACAAGAAGAAAAAATTATAAACAAGAGCCTCCCAATAGC
GCAGGAGCTTGGTGTCTGTTACAAAGGCTTCCGCCCTCCCGGCGGATCGA
TGAACGCCGGTACCAAGGATTTGCTCCGTCGTCACGGAATCAAGTATGCT
TCAATTCTGGGCCAAGATATCAGCACGGACAAAGATGGCTTCGTGACTCT
ACCGTTTCAATGGAGGGCTGTCGATGCGTTCTACATCCTAGATGCATTCG
ACTTTCTTAGAGCTGAATACGGAGAGCAAGGATCTATCTTCACTTGCGAA
GCTTTCCAGCAGGCGCTCTTTGACCAGATCGATGCTGCAGTTGAGAAGGG
GGCCTTCATTGATATTCTTTTCCATCCTTTTCTCCACACGTCACCCGAGA
CCCGTGCGGTTATTGAAGCAGTGGTTGCGCGAGTGAGCAACGATCCAGAC
ATATGGTGTGCACCAACTTATGAGGTGGCAGAATGGGCTGCAGCACATCA
ATAG back to topCoding sequence (CDS) from alignment at An08:2205094..2205897- >CBS51388_005670-T1 ID=CBS51388_005670-T1|Name=CBS51388_005670-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=804bp|location=Sequence derived from alignment at An08:2205094..2205897- (Aspergillus niger CBS 513.88)
ATGCCTCCCTCTTCTTGGCCAGACAGTGCAAAAGCTGCAGTGAGCATCAC
ATTTGATAATGTGGGTGAATCAAGAGACGTCGGAGTAGGAGCATGGCCGA
AGGAGAAACCCGTGGGACAGCATCCGTCGGTACTGGAGGTGACCCCAATT
ATTCTCGACATTCTTGACAAGCACGACGTGAAAGTGACATATTTCATGGA
AGCATGGGGTATTCAGACGTACCCAAAGATGCTCAGCGAGGTCCAGAGTC
GTGGCCATGAAATTGGATATCACGCATATCAGCACGAGGAGTGGAAAACG
CTGTCACCCCTACAAGAAGAAAAAATTATAAACAAGAGCCTCCCAATAGC
GCAGGAGCTTGGTGTCTGTTACAAAGGCTTCCGCCCTCCCGGCGGATCGA
TGAACGCCGGTACCAAGGATTTGCTCCGTCGTCACGGAATCAAGTATGCT
TCAATTCTGGGCCAAGATATCAGCACGGACAAAGATGGCTTCGTGACTCT
ACCGTTTCAATGGAGGGCTGTCGATGCGTTCTACATCCTAGATGCATTCG
ACTTTCTTAGAGCTGAATACGGAGAGCAAGGATCTATCTTCACTTGCGAA
GCTTTCCAGCAGGCGCTCTTTGACCAGATCGATGCTGCAGTTGAGAAGGG
GGCCTTCATTGATATTCTTTTCCATCCTTTTCTCCACACGTCACCCGAGA
CCCGTGCGGTTATTGAAGCAGTGGTTGCGCGAGTGAGCAACGATCCAGAC
ATATGGTGTGCACCAACTTATGAGGTGGCAGAATGGGCTGCAGCACATCA
ATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.5 |
| Note | CAZy:CE4 |
| DBxref | InterPro:IPR011330 |
| DBxref | InterPro:IPR002509 |
| DBxref | PFAM:PF01522 |
| DBxref | PFAM:PF10096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2205094..2205897 - |
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