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CBS51388_005675-T1, CBS51388_005675-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005675-T1
Unique NameCBS51388_005675-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2216873..2217807-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005675-T1 ID=CBS51388_005675-T1|Name=CBS51388_005675-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=935bp|location=Sequence derived from alignment at An08:2216873..2217807- (Aspergillus niger CBS 513.88)
ATGGCTGACCAAAAGAGCATTCGGCGACCGAACCCGACACTTTCGGACAG
TGTCTTCAAAATGTTCAGCCTACAAGGAAAAGTTGTTATCATCACTGGTG
GTACCGGTGGAATCGGCTACAACGTCGCTCGTGGTCTAGCTGAAGCCGGT
GCCAACATTGCCCTCTGGTATAATACATCTCCCCATGCAGATTCTCTGGC
TGGCGCACTCCAAAAAGACTTTGGTGTTAGGGCAAAGGCGTATAAATGCG
CTGTGCAGAACTTCACTGAGGTACAATGCCCTCCTTCCCAGAGAAGCTCA
ATTATGAGACTCATTATAATCTTTTGAATAGGTACAAGCAATGACTGACG
CCGTCGTCCGCGACTTCGGCCGTTTGGATGTCATGATTGCAAATGCGGGT
ATTCCATCCAAGGCTGGTGGCCTAGATGACAAATTGGAGGACTGGCAGCG
CGTGGTTGATATAGATTTCTCTGGCGCATATTACTGCGCTCGTGTCGCCG
GCACAATCTTCCAGAAGCAGGGCTTTGGTAACATGATTTTCACGGCATCC
ATGTCGGGTCATGCGGCGAATGTACCCCAAGAGCAGGTCAGTTGCGATTT
ACCCAGAAGTTTGCCCTGAGGTTCGCGCTTAACTAAAAGCGCTATAGGCT
TGCTATAATGCTTGCAAAGCTGGTGTTATTCACCTTGCCAAGTCTCTCGC
CGTGGAATGGGCCAGTTTTGCTCGCGTGAACTGTGTTAGCCCTGGCTACA
TTGACACCCCAATCAGTGGAGACTGTTCCTTTGAAATGAAGGAGGCGTGG
TATAGCCTTACACCCCTCAAGCGTGATGCAGACCCTCGCGAGTTGAAAGG
TGTCTATCTGTACCTCGCCAGTGATGCTAGCACGTACACAACGGGCGCTG
ACATTGTGGTCGACGGAGGGTACACATGTCGGTAA
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Coding sequence (CDS) from alignment at An08:2216873..2217807-

>CBS51388_005675-T1 ID=CBS51388_005675-T1|Name=CBS51388_005675-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2439bp|location=Sequence derived from alignment at An08:2216873..2217807- (Aspergillus niger CBS 513.88)
GCTTGCTATAATGCTTGCAAAGCTGGTGTTATTCACCTTGCCAAGTCTCT
CGCCGTGGAATGGGCCAGTTTTGCTCGCGTGAACTGTGTTAGCCCTGGCT
ACATTGACACCCCAATCAGTGGAGACTGTTCCTTTGAAATGAAGGAGGCG
TGGTATAGCCTTACACCCCTCAAGCGTGATGCAGACCCTCGCGAGTTGAA
AGGTGTCTATCTGTACCTCGCCAGTGATGCTAGCACGTACACAACGGGCG
CTGACATTGTGGTCGACGGAGGGTACACATGTCGGTAAGTACAAGCAATG
ACTGACGCCGTCGTCCGCGACTTCGGCCGTTTGGATGTCATGATTGCAAA
TGCGGGTATTCCATCCAAGGCTGGTGGCCTAGATGACAAATTGGAGGACT
GGCAGCGCGTGGTTGATATAGATTTCTCTGGCGCATATTACTGCGCTCGT
GTCGCCGGCACAATCTTCCAGAAGCAGGGCTTTGGTAACATGATTTTCAC
GGCATCCATGTCGGGTCATGCGGCGAATGTACCCCAAGAGCAGATGGCTG
ACCAAAAGAGCATTCGGCGACCGAACCCGACACTTTCGGACAGTGTCTTC
AAAATGTTCAGCCTACAAGGAAAAGTTGTTATCATCACTGGTGGTACCGG
TGGAATCGGCTACAACGTCGCTCGTGGTCTAGCTGAAGCCGGTGCCAACA
TTGCCCTCTGGTATAATACATCTCCCCATGCAGATTCTCTGGCTGGCGCA
CTCCAAAAAGACTTTGGTGTTAGGGCAAAGGCGTATAAATGCGCTGTGCA
GAACTTCACTGAGGCTTGCTATAATGCTTGCAAAGCTGGTGTTATTCACC
TTGCCAAGTCTCTCGCCGTGGAATGGGCCAGTTTTGCTCGCGTGAACTGT
GTTAGCCCTGGCTACATTGACACCCCAATCAGTGGAGACTGTTCCTTTGA
AATGAAGGAGGCGTGGTATAGCCTTACACCCCTCAAGCGTGATGCAGACC
CTCGCGAGTTGAAAGGTGTCTATCTGTACCTCGCCAGTGATGCTAGCACG
TACACAACGGGCGCTGACATTGTGGTCGACGGAGGGTACACATGTCGGTA
AGTACAAGCAATGACTGACGCCGTCGTCCGCGACTTCGGCCGTTTGGATG
TCATGATTGCAAATGCGGGTATTCCATCCAAGGCTGGTGGCCTAGATGAC
AAATTGGAGGACTGGCAGCGCGTGGTTGATATAGATTTCTCTGGCGCATA
TTACTGCGCTCGTGTCGCCGGCACAATCTTCCAGAAGCAGGGCTTTGGTA
ACATGATTTTCACGGCATCCATGTCGGGTCATGCGGCGAATGTACCCCAA
GAGCAGATGGCTGACCAAAAGAGCATTCGGCGACCGAACCCGACACTTTC
GGACAGTGTCTTCAAAATGTTCAGCCTACAAGGAAAAGTTGTTATCATCA
CTGGTGGTACCGGTGGAATCGGCTACAACGTCGCTCGTGGTCTAGCTGAA
GCCGGTGCCAACATTGCCCTCTGGTATAATACATCTCCCCATGCAGATTC
TCTGGCTGGCGCACTCCAAAAAGACTTTGGTGTTAGGGCAAAGGCGTATA
AATGCGCTGTGCAGAACTTCACTGAGGCTTGCTATAATGCTTGCAAAGCT
GGTGTTATTCACCTTGCCAAGTCTCTCGCCGTGGAATGGGCCAGTTTTGC
TCGCGTGAACTGTGTTAGCCCTGGCTACATTGACACCCCAATCAGTGGAG
ACTGTTCCTTTGAAATGAAGGAGGCGTGGTATAGCCTTACACCCCTCAAG
CGTGATGCAGACCCTCGCGAGTTGAAAGGTGTCTATCTGTACCTCGCCAG
TGATGCTAGCACGTACACAACGGGCGCTGACATTGTGGTCGACGGAGGGT
ACACATGTCGGTAAGTACAAGCAATGACTGACGCCGTCGTCCGCGACTTC
GGCCGTTTGGATGTCATGATTGCAAATGCGGGTATTCCATCCAAGGCTGG
TGGCCTAGATGACAAATTGGAGGACTGGCAGCGCGTGGTTGATATAGATT
TCTCTGGCGCATATTACTGCGCTCGTGTCGCCGGCACAATCTTCCAGAAG
CAGGGCTTTGGTAACATGATTTTCACGGCATCCATGTCGGGTCATGCGGC
GAATGTACCCCAAGAGCAGATGGCTGACCAAAAGAGCATTCGGCGACCGA
ACCCGACACTTTCGGACAGTGTCTTCAAAATGTTCAGCCTACAAGGAAAA
GTTGTTATCATCACTGGTGGTACCGGTGGAATCGGCTACAACGTCGCTCG
TGGTCTAGCTGAAGCCGGTGCCAACATTGCCCTCTGGTATAATACATCTC
CCCATGCAGATTCTCTGGCTGGCGCACTCCAAAAAGACTTTGGTGTTAGG
GCAAAGGCGTATAAATGCGCTGTGCAGAACTTCACTGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005675CBS51388_005675Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005675-T1CBS51388_005675-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005675-T1.cdsCBS51388_005675-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005675-T1.exon3CBS51388_005675-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_005675-T1.exon2CBS51388_005675-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005675-T1.exon1CBS51388_005675-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteantiSMASH:Cluster_8.5
NoteSMCOG1001:short-chain dehydrogenase/reductase SDR
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2216873..2217807 -
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