You are here

Home

CBS51388_005679-T1, CBS51388_005679-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005679-T1
Unique NameCBS51388_005679-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2225196..2226513-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005679-T1 ID=CBS51388_005679-T1|Name=CBS51388_005679-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1318bp|location=Sequence derived from alignment at An08:2225196..2226513- (Aspergillus niger CBS 513.88)
ATGGCTGTAAGTATGTCTTATCATTATTTCCATAGACCCTCTGATTCCGG
AGCTATCCCCAGGAAACGAACCGATCTTTCGTCTTGCACGCTATAAAGGA
TGTGGTTTTTGAAGACCGCCCGGTGCCTGCGCTGAAAGATCCTTGGGATG
TACGAGTGCACATTGCGCAGACCGGTATCTGTGGAAGTGACGTACACTAC
TGGCAAAGAGGGCGGATCGGAGGTACATGAGCCCAAAGAAATTGGCAAAG
GAAGCTATTGAATATGACTGATGGCCACTAAACAGACTTCATCCTCAAAT
CCCCAATAGTACTTGGCCATGAAAGCTCCGGTACTGTTGTCGAAGTCGGT
TCTGCTGTGAAGAATGTCAAAGTTGGGGAACGAGTCGCCATAGAGCCCGG
TGTACCATGCAGACAGTACGTATTATCTACAATTTGATATACGCAAATAT
CAGCAGTGACTAAAGTCAACCAGCTGCGACTTCTGCCGCAGTGGCTCCTA
TAACCTTTGCCCGGACACTATTTTTGCCGCGACTCCCCCGCATGACGGCA
CGCTTTCAAAGTACTACACCACGCAGGCGGACTACTGCTACCCGCTGCCA
GAGAACATGGACCTGGAAGAGGGCGCGCTCGTGGAACCGGTCGCTGTTGC
CGTGCAGATCACTAAGGTTGGTAAAGTGAAGCCAAACCAGACGGTCGTAG
TCTTTGGATGCGGGCCCATTGGACTTCTCTGTCAAGCCGTGAGCAAGGCG
TATTCTGCGAAGAAGGTGATCGGTGTGGACATCAGTCAGTCGCGTGCAGA
CTTTGCCCACAACTTTGGTGCCGACCATGTTTTCGTGCCTCCTGCTCGTC
CCGAAGGCAAAGATGACACCGCATGGAACGAAGAGGTGGCAAATTTGATG
AAGGAGAAGTTTGATTTGGGCGAGGGCCCAGATGTCGTCTTAGAGGCTAC
TGGAGCTCAGGCATGCATCCAGACCGGGATATATTTGACCAAGAGGGGGG
GCACATATGTGCAAGCCGGTATGGGAAGCGAGGTGAGTTCATATTAATAT
TTATTAGCTTAAAGTAAGCTGACATGAATAGAATGTTGTCTTCCCCATCA
CTACCGCTTGTATTCGTGATTTGCACATCCGGGGCTCCATTCGGTATACG
GCTGGCTGTTATCCTACGGCCGTGGATTCGATCGCATCTGGGAAGATTGA
TGTCAAGCAGCTCATTACGAACCGATTCAAATTTGAAGATGCCGAGGAGG
CATTCGAGCTTGTGAGACAAGGAAAACAGAGCGTGATTAAGGTAATTATT
CAGGGCGTTCCGGCATAA
back to top

Coding sequence (CDS) from alignment at An08:2225196..2226513-

>CBS51388_005679-T1 ID=CBS51388_005679-T1|Name=CBS51388_005679-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5370bp|location=Sequence derived from alignment at An08:2225196..2226513- (Aspergillus niger CBS 513.88)
AATGTTGTCTTCCCCATCACTACCGCTTGTATTCGTGATTTGCACATCCG
GGGCTCCATTCGGTATACGGCTGGCTGTTATCCTACGGCCGTGGATTCGA
TCGCATCTGGGAAGATTGATGTCAAGCAGCTCATTACGAACCGATTCAAA
TTTGAAGATGCCGAGGAGGCATTCGAGCTTGTGAGACAAGGAAAACAGAG
CGTGATTAAGGTAATTATTCAGGGCGTTCCGGCATAATGGCTCCTATAAC
CTTTGCCCGGACACTATTTTTGCCGCGACTCCCCCGCATGACGGCACGCT
TTCAAAGTACTACACCACGCAGGCGGACTACTGCTACCCGCTGCCAGAGA
ACATGGACCTGGAAGAGGGCGCGCTCGTGGAACCGGTCGCTGTTGCCGTG
CAGATCACTAAGGTTGGTAAAGTGAAGCCAAACCAGACGGTCGTAGTCTT
TGGATGCGGGCCCATTGGACTTCTCTGTCAAGCCGTGAGCAAGGCGTATT
CTGCGAAGAAGGTGATCGGTGTGGACATCAGTCAGTCGCGTGCAGACTTT
GCCCACAACTTTGGTGCCGACCATGTTTTCGTGCCTCCTGCTCGTCCCGA
AGGCAAAGATGACACCGCATGGAACGAAGAGGTGGCAAATTTGATGAAGG
AGAAGTTTGATTTGGGCGAGGGCCCAGATGTCGTCTTAGAGGCTACTGGA
GCTCAGGCATGCATCCAGACCGGGATATATTTGACCAAGAGGGGGGGCAC
ATATGTGCAAGCCGGTATGGGAAGCGAGACTTCATCCTCAAATCCCCAAT
AGTACTTGGCCATGAAAGCTCCGGTACTGTTGTCGAAGTCGGTTCTGCTG
TGAAGAATGTCAAAGTTGGGGAACGAGTCGCCATAGAGCCCGGTGTACCA
TGCAGACAGAAACGAACCGATCTTTCGTCTTGCACGCTATAAAGGATGTG
GTTTTTGAAGACCGCCCGGTGCCTGCGCTGAAAGATCCTTGGGATGTACG
AGTGCACATTGCGCAGACCGGTATCTGTGGAAGTGACGTACACTACTGGC
AAAGAGGGCGGATCGGAGATGGCTAATGTTGTCTTCCCCATCACTACCGC
TTGTATTCGTGATTTGCACATCCGGGGCTCCATTCGGTATACGGCTGGCT
GTTATCCTACGGCCGTGGATTCGATCGCATCTGGGAAGATTGATGTCAAG
CAGCTCATTACGAACCGATTCAAATTTGAAGATGCCGAGGAGGCATTCGA
GCTTGTGAGACAAGGAAAACAGAGCGTGATTAAGGTAATTATTCAGGGCG
TTCCGGCATAATGGCTCCTATAACCTTTGCCCGGACACTATTTTTGCCGC
GACTCCCCCGCATGACGGCACGCTTTCAAAGTACTACACCACGCAGGCGG
ACTACTGCTACCCGCTGCCAGAGAACATGGACCTGGAAGAGGGCGCGCTC
GTGGAACCGGTCGCTGTTGCCGTGCAGATCACTAAGGTTGGTAAAGTGAA
GCCAAACCAGACGGTCGTAGTCTTTGGATGCGGGCCCATTGGACTTCTCT
GTCAAGCCGTGAGCAAGGCGTATTCTGCGAAGAAGGTGATCGGTGTGGAC
ATCAGTCAGTCGCGTGCAGACTTTGCCCACAACTTTGGTGCCGACCATGT
TTTCGTGCCTCCTGCTCGTCCCGAAGGCAAAGATGACACCGCATGGAACG
AAGAGGTGGCAAATTTGATGAAGGAGAAGTTTGATTTGGGCGAGGGCCCA
GATGTCGTCTTAGAGGCTACTGGAGCTCAGGCATGCATCCAGACCGGGAT
ATATTTGACCAAGAGGGGGGGCACATATGTGCAAGCCGGTATGGGAAGCG
AGACTTCATCCTCAAATCCCCAATAGTACTTGGCCATGAAAGCTCCGGTA
CTGTTGTCGAAGTCGGTTCTGCTGTGAAGAATGTCAAAGTTGGGGAACGA
GTCGCCATAGAGCCCGGTGTACCATGCAGACAGAAACGAACCGATCTTTC
GTCTTGCACGCTATAAAGGATGTGGTTTTTGAAGACCGCCCGGTGCCTGC
GCTGAAAGATCCTTGGGATGTACGAGTGCACATTGCGCAGACCGGTATCT
GTGGAAGTGACGTACACTACTGGCAAAGAGGGCGGATCGGAGATGGCTAA
TGTTGTCTTCCCCATCACTACCGCTTGTATTCGTGATTTGCACATCCGGG
GCTCCATTCGGTATACGGCTGGCTGTTATCCTACGGCCGTGGATTCGATC
GCATCTGGGAAGATTGATGTCAAGCAGCTCATTACGAACCGATTCAAATT
TGAAGATGCCGAGGAGGCATTCGAGCTTGTGAGACAAGGAAAACAGAGCG
TGATTAAGGTAATTATTCAGGGCGTTCCGGCATAATGGCTCCTATAACCT
TTGCCCGGACACTATTTTTGCCGCGACTCCCCCGCATGACGGCACGCTTT
CAAAGTACTACACCACGCAGGCGGACTACTGCTACCCGCTGCCAGAGAAC
ATGGACCTGGAAGAGGGCGCGCTCGTGGAACCGGTCGCTGTTGCCGTGCA
GATCACTAAGGTTGGTAAAGTGAAGCCAAACCAGACGGTCGTAGTCTTTG
GATGCGGGCCCATTGGACTTCTCTGTCAAGCCGTGAGCAAGGCGTATTCT
GCGAAGAAGGTGATCGGTGTGGACATCAGTCAGTCGCGTGCAGACTTTGC
CCACAACTTTGGTGCCGACCATGTTTTCGTGCCTCCTGCTCGTCCCGAAG
GCAAAGATGACACCGCATGGAACGAAGAGGTGGCAAATTTGATGAAGGAG
AAGTTTGATTTGGGCGAGGGCCCAGATGTCGTCTTAGAGGCTACTGGAGC
TCAGGCATGCATCCAGACCGGGATATATTTGACCAAGAGGGGGGGCACAT
ATGTGCAAGCCGGTATGGGAAGCGAGACTTCATCCTCAAATCCCCAATAG
TACTTGGCCATGAAAGCTCCGGTACTGTTGTCGAAGTCGGTTCTGCTGTG
AAGAATGTCAAAGTTGGGGAACGAGTCGCCATAGAGCCCGGTGTACCATG
CAGACAGAAACGAACCGATCTTTCGTCTTGCACGCTATAAAGGATGTGGT
TTTTGAAGACCGCCCGGTGCCTGCGCTGAAAGATCCTTGGGATGTACGAG
TGCACATTGCGCAGACCGGTATCTGTGGAAGTGACGTACACTACTGGCAA
AGAGGGCGGATCGGAGATGGCTAATGTTGTCTTCCCCATCACTACCGCTT
GTATTCGTGATTTGCACATCCGGGGCTCCATTCGGTATACGGCTGGCTGT
TATCCTACGGCCGTGGATTCGATCGCATCTGGGAAGATTGATGTCAAGCA
GCTCATTACGAACCGATTCAAATTTGAAGATGCCGAGGAGGCATTCGAGC
TTGTGAGACAAGGAAAACAGAGCGTGATTAAGGTAATTATTCAGGGCGTT
CCGGCATAATGGCTCCTATAACCTTTGCCCGGACACTATTTTTGCCGCGA
CTCCCCCGCATGACGGCACGCTTTCAAAGTACTACACCACGCAGGCGGAC
TACTGCTACCCGCTGCCAGAGAACATGGACCTGGAAGAGGGCGCGCTCGT
GGAACCGGTCGCTGTTGCCGTGCAGATCACTAAGGTTGGTAAAGTGAAGC
CAAACCAGACGGTCGTAGTCTTTGGATGCGGGCCCATTGGACTTCTCTGT
CAAGCCGTGAGCAAGGCGTATTCTGCGAAGAAGGTGATCGGTGTGGACAT
CAGTCAGTCGCGTGCAGACTTTGCCCACAACTTTGGTGCCGACCATGTTT
TCGTGCCTCCTGCTCGTCCCGAAGGCAAAGATGACACCGCATGGAACGAA
GAGGTGGCAAATTTGATGAAGGAGAAGTTTGATTTGGGCGAGGGCCCAGA
TGTCGTCTTAGAGGCTACTGGAGCTCAGGCATGCATCCAGACCGGGATAT
ATTTGACCAAGAGGGGGGGCACATATGTGCAAGCCGGTATGGGAAGCGAG
ACTTCATCCTCAAATCCCCAATAGTACTTGGCCATGAAAGCTCCGGTACT
GTTGTCGAAGTCGGTTCTGCTGTGAAGAATGTCAAAGTTGGGGAACGAGT
CGCCATAGAGCCCGGTGTACCATGCAGACAGAAACGAACCGATCTTTCGT
CTTGCACGCTATAAAGGATGTGGTTTTTGAAGACCGCCCGGTGCCTGCGC
TGAAAGATCCTTGGGATGTACGAGTGCACATTGCGCAGACCGGTATCTGT
GGAAGTGACGTACACTACTGGCAAAGAGGGCGGATCGGAGATGGCTAATG
TTGTCTTCCCCATCACTACCGCTTGTATTCGTGATTTGCACATCCGGGGC
TCCATTCGGTATACGGCTGGCTGTTATCCTACGGCCGTGGATTCGATCGC
ATCTGGGAAGATTGATGTCAAGCAGCTCATTACGAACCGATTCAAATTTG
AAGATGCCGAGGAGGCATTCGAGCTTGTGAGACAAGGAAAACAGAGCGTG
ATTAAGGTAATTATTCAGGGCGTTCCGGCATAATGGCTCCTATAACCTTT
GCCCGGACACTATTTTTGCCGCGACTCCCCCGCATGACGGCACGCTTTCA
AAGTACTACACCACGCAGGCGGACTACTGCTACCCGCTGCCAGAGAACAT
GGACCTGGAAGAGGGCGCGCTCGTGGAACCGGTCGCTGTTGCCGTGCAGA
TCACTAAGGTTGGTAAAGTGAAGCCAAACCAGACGGTCGTAGTCTTTGGA
TGCGGGCCCATTGGACTTCTCTGTCAAGCCGTGAGCAAGGCGTATTCTGC
GAAGAAGGTGATCGGTGTGGACATCAGTCAGTCGCGTGCAGACTTTGCCC
ACAACTTTGGTGCCGACCATGTTTTCGTGCCTCCTGCTCGTCCCGAAGGC
AAAGATGACACCGCATGGAACGAAGAGGTGGCAAATTTGATGAAGGAGAA
GTTTGATTTGGGCGAGGGCCCAGATGTCGTCTTAGAGGCTACTGGAGCTC
AGGCATGCATCCAGACCGGGATATATTTGACCAAGAGGGGGGGCACATAT
GTGCAAGCCGGTATGGGAAGCGAGACTTCATCCTCAAATCCCCAATAGTA
CTTGGCCATGAAAGCTCCGGTACTGTTGTCGAAGTCGGTTCTGCTGTGAA
GAATGTCAAAGTTGGGGAACGAGTCGCCATAGAGCCCGGTGTACCATGCA
GACAGAAACGAACCGATCTTTCGTCTTGCACGCTATAAAGGATGTGGTTT
TTGAAGACCGCCCGGTGCCTGCGCTGAAAGATCCTTGGGATGTACGAGTG
CACATTGCGCAGACCGGTATCTGTGGAAGTGACGTACACTACTGGCAAAG
AGGGCGGATCGGAGATGGCT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005679CBS51388_005679Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005679-T1CBS51388_005679-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005679-T1.cdsCBS51388_005679-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005679-T1.exon5CBS51388_005679-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_005679-T1.exon4CBS51388_005679-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_005679-T1.exon3CBS51388_005679-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_005679-T1.exon2CBS51388_005679-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005679-T1.exon1CBS51388_005679-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR002328
DBxrefInterPro:IPR013154
DBxrefInterPro:IPR013149
DBxrefInterPro:IPR020843
DBxrefPFAM:PF16912
DBxrefPFAM:PF00107
DBxrefPFAM:PF08240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2225196..2226513 -
Powered by Drupal