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CBS51388_005694-T1, CBS51388_005694-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005694-T1
Unique NameCBS51388_005694-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2274301..2275499+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005694-T1 ID=CBS51388_005694-T1|Name=CBS51388_005694-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1199bp|location=Sequence derived from alignment at An08:2274301..2275499+ (Aspergillus niger CBS 513.88)
ATGGCATTGGGGGTCTTGCTCGAAACCGCTGCATTTTTGGGAGCTTCCTG
GAGCCATGAGATCTGGCAACTCTACCTTAGTCAAGGCGTCTGCTTCGGCT
GGGGTCTCGGATTGCAGTATCTCTCGACAACCTACCTCATACCCCAATGG
TTCAGCCGTCATCGCAGTCTCGCAGCCGGCATTGCAACCGGCGGCAGTGG
AACAGGAGGCTTGATTTACTCTCTTTCGACGCATGCCCTTCTCGCGCGGT
TCGGCCTCAGCTGGTCCTACCGTATCCTTGCCATTTGCCAGCTCGTCGTC
AACGCAACTTGTTTGCTTGTCATACGCGATAGGAAAACGGTAGCAGCACC
CAGCCGATCGGTTCATACTATCCTCCGTCTCTGCACCCGGTACGAGATGT
GGTTGTACCTCGGCTGGAGCTTCTTCAGTGTAATGGGGTTCATGGTCATC
TGGTTCTCGCTGGCCACGTATGGTCGCAGCGTTGGGTTGACCTTGAGCCA
AGGCTCGATTGTCACGGCGGTCATGAATGTTGGCCAGATGGTGGGGCGTC
CGGCCGTGGGGTTTATGTCAGATGCCGTCGGTCGCATCAACATCGCTACT
ATCGCAACCTTCGTCAGTGGCTTGCTTTGTTTGTTGTTATGGACTTTTGC
CCGCACTTACGCTGCTCTGATCTGCTTCGCCTTGTTTGCAGGCATCTTCT
TTGGCACCTTCTGGACGGTATCTCATTCCTCACTGTCTCCTGTCTTATCT
TCTCGGCGTGGACGCTAACAGTCAAATGAAACGGCATACAGGTGGTCGGT
CCACTTGGAGCAGAGGTCTTCGCGTTGGAGGATCTGCAGTCGGGCTTGAC
AATTATATGGCTGATCTGTTCGGTCCCTGCTACGTGTAAGTCTTTCTGTT
TCTTCTCTGCATCACCACTTTTCTTCTGAAGGTGACCTCTCGAGATACTG
ATCAAGACGAGAAAAACAGTTGGAGAAGCCATCGGTCTCGAGCTGCGAAC
CTCGGGAAGGCATGGCTTTTTGCACACGCAACTATTCACGGGATTCATGT
ACATCGGCGCCGCGCTATGCTTAGTCCTGCTACGAGGATGGAAGATTGGC
GAACTCCGGAAACAGCAGCAGCAGCAGGAAGGCATTACAATGGGACGTGG
TGCAAGTAAGAAGTATCTGAACTTTGTCGCCGCGACGCCAAAGGTGTAA
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Coding sequence (CDS) from alignment at An08:2274301..2275499+

>CBS51388_005694-T1 ID=CBS51388_005694-T1|Name=CBS51388_005694-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3123bp|location=Sequence derived from alignment at An08:2274301..2275499+ (Aspergillus niger CBS 513.88)
ATGGCATTGGGGGTCTTGCTCGAAACCGCTGCATTTTTGGGAGCTTCCTG
GAGCCATGAGATCTGGCAACTCTACCTTAGTCAAGGCGTCTGCTTCGGCT
GGGGTCTCGGATTGCAGTATCTCTCGACAACCTACCTCATACCCCAATGG
TTCAGCCGTCATCGCAGTCTCGCAGCCGGCATTGCAACCGGCGGCAGTGG
AACAGGAGGCTTGATTTACTCTCTTTCGACGCATGCCCTTCTCGCGCGGT
TCGGCCTCAGCTGGTCCTACCGTATCCTTGCCATTTGCCAGCTCGTCGTC
AACGCAACTTGTTTGCTTGTCATACGCGATAGGAAAACGGTAGCAGCACC
CAGCCGATCGGTTCATACTATCCTCCGTCTCTGCACCCGGTACGAGATGT
GGTTGTACCTCGGCTGGAGCTTCTTCAGTGTAATGGGGTTCATGGTCATC
TGGTTCTCGCTGGCCACGTATGGTCGCAGCGTTGGGTTGACCTTGAGCCA
AGGCTCGATTGTCACGGCGGTCATGAATGTTGGCCAGATGGTGGGGCGTC
CGGCCGTGGGGTTTATGTCAGATGCCGTCGGTCGCATCAACATCGCTACT
ATCGCAACCTTCGTCAGTGGCTTGCTTTGTTTGTTGTTATGGACTTTTGC
CCGCACTTACGCTGCTCTGATCTGCTTCGCCTTGTTTGCAGGCATCTTCT
TTGGCACCTTCTGGACGGTGGTCGGTCCACTTGGAGCAGAGGTCTTCGCG
TTGGAGGATCTGCAGTCGGGCTTGACAATTATATGGCTGATCTGTTCGGT
CCCTGCTACGTTTGGAGAAGCCATCGGTCTCGAGCTGCGAACCTCGGGAA
GGCATGGCTTTTTGCACACGCAACTATTCACGGGATTCATGTACATCGGC
GCCGCGCTATGCTTAGTCCTGCTACGAGGATGGAAGATTGGCGAACTCCG
GAAACAGCAGCAGCAGCAGGAAGGCATTACAATGGGACGTGGTGCAAGTA
AGAAGTATCTGAACTTTGTCGCCGCGACGCCAAAGGTGTAAATGGCATTG
GGGGTCTTGCTCGAAACCGCTGCATTTTTGGGAGCTTCCTGGAGCCATGA
GATCTGGCAACTCTACCTTAGTCAAGGCGTCTGCTTCGGCTGGGGTCTCG
GATTGCAGTATCTCTCGACAACCTACCTCATACCCCAATGGTTCAGCCGT
CATCGCAGTCTCGCAGCCGGCATTGCAACCGGCGGCAGTGGAACAGGAGG
CTTGATTTACTCTCTTTCGACGCATGCCCTTCTCGCGCGGTTCGGCCTCA
GCTGGTCCTACCGTATCCTTGCCATTTGCCAGCTCGTCGTCAACGCAACT
TGTTTGCTTGTCATACGCGATAGGAAAACGGTAGCAGCACCCAGCCGATC
GGTTCATACTATCCTCCGTCTCTGCACCCGGTACGAGATGTGGTTGTACC
TCGGCTGGAGCTTCTTCAGTGTAATGGGGTTCATGGTCATCTGGTTCTCG
CTGGCCACGTATGGTCGCAGCGTTGGGTTGACCTTGAGCCAAGGCTCGAT
TGTCACGGCGGTCATGAATGTTGGCCAGATGGTGGGGCGTCCGGCCGTGG
GGTTTATGTCAGATGCCGTCGGTCGCATCAACATCGCTACTATCGCAACC
TTCGTCAGTGGCTTGCTTTGTTTGTTGTTATGGACTTTTGCCCGCACTTA
CGCTGCTCTGATCTGCTTCGCCTTGTTTGCAGGCATCTTCTTTGGCACCT
TCTGGACGGTGGTCGGTCCACTTGGAGCAGAGGTCTTCGCGTTGGAGGAT
CTGCAGTCGGGCTTGACAATTATATGGCTGATCTGTTCGGTCCCTGCTAC
GTTTGGAGAAGCCATCGGTCTCGAGCTGCGAACCTCGGGAAGGCATGGCT
TTTTGCACACGCAACTATTCACGGGATTCATGTACATCGGCGCCGCGCTA
TGCTTAGTCCTGCTACGAGGATGGAAGATTGGCGAACTCCGGAAACAGCA
GCAGCAGCAGGAAGGCATTACAATGGGACGTGGTGCAAGTAAGAAGTATC
TGAACTTTGTCGCCGCGACGCCAAAGGTGTAAATGGCATTGGGGGTCTTG
CTCGAAACCGCTGCATTTTTGGGAGCTTCCTGGAGCCATGAGATCTGGCA
ACTCTACCTTAGTCAAGGCGTCTGCTTCGGCTGGGGTCTCGGATTGCAGT
ATCTCTCGACAACCTACCTCATACCCCAATGGTTCAGCCGTCATCGCAGT
CTCGCAGCCGGCATTGCAACCGGCGGCAGTGGAACAGGAGGCTTGATTTA
CTCTCTTTCGACGCATGCCCTTCTCGCGCGGTTCGGCCTCAGCTGGTCCT
ACCGTATCCTTGCCATTTGCCAGCTCGTCGTCAACGCAACTTGTTTGCTT
GTCATACGCGATAGGAAAACGGTAGCAGCACCCAGCCGATCGGTTCATAC
TATCCTCCGTCTCTGCACCCGGTACGAGATGTGGTTGTACCTCGGCTGGA
GCTTCTTCAGTGTAATGGGGTTCATGGTCATCTGGTTCTCGCTGGCCACG
TATGGTCGCAGCGTTGGGTTGACCTTGAGCCAAGGCTCGATTGTCACGGC
GGTCATGAATGTTGGCCAGATGGTGGGGCGTCCGGCCGTGGGGTTTATGT
CAGATGCCGTCGGTCGCATCAACATCGCTACTATCGCAACCTTCGTCAGT
GGCTTGCTTTGTTTGTTGTTATGGACTTTTGCCCGCACTTACGCTGCTCT
GATCTGCTTCGCCTTGTTTGCAGGCATCTTCTTTGGCACCTTCTGGACGG
TGGTCGGTCCACTTGGAGCAGAGGTCTTCGCGTTGGAGGATCTGCAGTCG
GGCTTGACAATTATATGGCTGATCTGTTCGGTCCCTGCTACGTTTGGAGA
AGCCATCGGTCTCGAGCTGCGAACCTCGGGAAGGCATGGCTTTTTGCACA
CGCAACTATTCACGGGATTCATGTACATCGGCGCCGCGCTATGCTTAGTC
CTGCTACGAGGATGGAAGATTGGCGAACTCCGGAAACAGCAGCAGCAGCA
GGAAGGCATTACAATGGGACGTGGTGCAAGTAAGAAGTATCTGAACTTTG
TCGCCGCGACGCCAAAGGTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005694CBS51388_005694Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005694-T1.exon1CBS51388_005694-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005694-T1.exon2CBS51388_005694-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005694-T1.exon3CBS51388_005694-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005694-T1.cdsCBS51388_005694-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005694-T1CBS51388_005694-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR011701
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2274301..2275499 +
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