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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2290999..2291795- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005697-T1 ID=CBS51388_005697-T1|Name=CBS51388_005697-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=797bp|location=Sequence derived from alignment at An08:2290999..2291795- (Aspergillus niger CBS 513.88)
ATGTTTACTACCTTCGACCTTCGCAACCCCGGACGCTCAATTCATGTCGG
CGTTGTCTTGCTCAATACGTGAGTTGCAATGCACACACGACTTCCTAAAC
AGTTCAGTAACTAAATATCCATAATACAGCGTAACCGAGCACCTTGACAT
CGCCCCTATCGGTTTCTTCCACAACTTTGGCAAAGACTTCATCGAGAATC
TCCCACCCTTCGCCATCTCCCCCGAACTCAAATCCCAAGCCCTAGACTTC
GTCACCCACTGGGTCACCGAAGATGGCAAGACACCCGGTTCTCTGAGCGG
AAACCTCAAAGTCATCCCCACGGTACGCCATCCCGATCCTCCACATCACA
AAACAGCCCCATTAACTCCCACAGGACTCCTTCACCACCTGCCCGCCCCT
TGACATCGTGCTCATCGGAGCCGGCCAAATGGGGTACCAAGCCACCACCA
CTGAGAAAGACTTTCTCCGGAAGTGCTATGCGGAATGTTCGGCGTTCCTG
TCTGTTTGCGGCGCATCAGACGCCCTTCTAGCGACGGGCATCCTGGAAGG
CAAGACGGCTACAGGTCCACTTTCGTTCTTGCCGTTGTTTCGCCAAATGG
CACCTGGAACGAACTGGGTGGAGAAGAGATGGGTAAGGGATGGGAAGATC
TGGACTACGGGGACGTTGTTGAATGGGCTGGATATGATTGCTGCGTTTGG
GCGGGAGGTCTGGGGTGGTGAGGGGTCGTTGGTGGAACATGTGCTTAGGA
CGGGATATTTTCCGAGCAGGAATGTGGATTATGAGGATGAAGTGTGA back to topCoding sequence (CDS) from alignment at An08:2290999..2291795- >CBS51388_005697-T1 ID=CBS51388_005697-T1|Name=CBS51388_005697-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2052bp|location=Sequence derived from alignment at An08:2290999..2291795- (Aspergillus niger CBS 513.88)
GACTCCTTCACCACCTGCCCGCCCCTTGACATCGTGCTCATCGGAGCCGG
CCAAATGGGGTACCAAGCCACCACCACTGAGAAAGACTTTCTCCGGAAGT
GCTATGCGGAATGTTCGGCGTTCCTGTCTGTTTGCGGCGCATCAGACGCC
CTTCTAGCGACGGGCATCCTGGAAGGCAAGACGGCTACAGGTCCACTTTC
GTTCTTGCCGTTGTTTCGCCAAATGGCACCTGGAACGAACTGGGTGGAGA
AGAGATGGGTAAGGGATGGGAAGATCTGGACTACGGGGACGTTGTTGAAT
GGGCTGGATATGATTGCTGCGTTTGGGCGGGAGGTCTGGGGTGGTGAGGG
GTCGTTGGTGGAACATGTGCTTAGGACGGGATATTTTCCGAGCAGGAATG
TGGATTATGAGGATGAAGTGTGACGTAACCGAGCACCTTGACATCGCCCC
TATCGGTTTCTTCCACAACTTTGGCAAAGACTTCATCGAGAATCTCCCAC
CCTTCGCCATCTCCCCCGAACTCAAATCCCAAGCCCTAGACTTCGTCACC
CACTGGGTCACCGAAGATGGCAAGACACCCGGTTCTCTGAGCGGAAACCT
CAAAGTCATCCCCACGATGTTTACTACCTTCGACCTTCGCAACCCCGGAC
GCTCAATTCATGTCGGCGTTGTCTTGCTCAATACGACTCCTTCACCACCT
GCCCGCCCCTTGACATCGTGCTCATCGGAGCCGGCCAAATGGGGTACCAA
GCCACCACCACTGAGAAAGACTTTCTCCGGAAGTGCTATGCGGAATGTTC
GGCGTTCCTGTCTGTTTGCGGCGCATCAGACGCCCTTCTAGCGACGGGCA
TCCTGGAAGGCAAGACGGCTACAGGTCCACTTTCGTTCTTGCCGTTGTTT
CGCCAAATGGCACCTGGAACGAACTGGGTGGAGAAGAGATGGGTAAGGGA
TGGGAAGATCTGGACTACGGGGACGTTGTTGAATGGGCTGGATATGATTG
CTGCGTTTGGGCGGGAGGTCTGGGGTGGTGAGGGGTCGTTGGTGGAACAT
GTGCTTAGGACGGGATATTTTCCGAGCAGGAATGTGGATTATGAGGATGA
AGTGTGACGTAACCGAGCACCTTGACATCGCCCCTATCGGTTTCTTCCAC
AACTTTGGCAAAGACTTCATCGAGAATCTCCCACCCTTCGCCATCTCCCC
CGAACTCAAATCCCAAGCCCTAGACTTCGTCACCCACTGGGTCACCGAAG
ATGGCAAGACACCCGGTTCTCTGAGCGGAAACCTCAAAGTCATCCCCACG
ATGTTTACTACCTTCGACCTTCGCAACCCCGGACGCTCAATTCATGTCGG
CGTTGTCTTGCTCAATACGACTCCTTCACCACCTGCCCGCCCCTTGACAT
CGTGCTCATCGGAGCCGGCCAAATGGGGTACCAAGCCACCACCACTGAGA
AAGACTTTCTCCGGAAGTGCTATGCGGAATGTTCGGCGTTCCTGTCTGTT
TGCGGCGCATCAGACGCCCTTCTAGCGACGGGCATCCTGGAAGGCAAGAC
GGCTACAGGTCCACTTTCGTTCTTGCCGTTGTTTCGCCAAATGGCACCTG
GAACGAACTGGGTGGAGAAGAGATGGGTAAGGGATGGGAAGATCTGGACT
ACGGGGACGTTGTTGAATGGGCTGGATATGATTGCTGCGTTTGGGCGGGA
GGTCTGGGGTGGTGAGGGGTCGTTGGTGGAACATGTGCTTAGGACGGGAT
ATTTTCCGAGCAGGAATGTGGATTATGAGGATGAAGTGTGACGTAACCGA
GCACCTTGACATCGCCCCTATCGGTTTCTTCCACAACTTTGGCAAAGACT
TCATCGAGAATCTCCCACCCTTCGCCATCTCCCCCGAACTCAAATCCCAA
GCCCTAGACTTCGTCACCCACTGGGTCACCGAAGATGGCAAGACACCCGG
TTCTCTGAGCGGAAACCTCAAAGTCATCCCCACGATGTTTACTACCTTCG
ACCTTCGCAACCCCGGACGCTCAATTCATGTCGGCGTTGTCTTGCTCAAT
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Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002818 |
| DBxref | InterPro:IPR029062 |
| DBxref | PFAM:PF01965 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2290999..2291795 - |
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