|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2337617..2339052- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005715-T1 ID=CBS51388_005715-T1|Name=CBS51388_005715-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1436bp|location=Sequence derived from alignment at An08:2337617..2339052- (Aspergillus niger CBS 513.88)
ATGCCACCAAACACTCCCGGCCATGCGATTGTTTACGGCGCATCAGGTTT
AATTGGCTGGGCGCTAATAAACCAGCTCTTAAGTCCGTACCCTGTCGCTG
ATACATTCAAAAAGGTCACAGCTGTCACGAATAGACCACTCGATCTCTCT
GAGACATACTGGCCAGAGGCAGACTCTCACCGGCCCCGGCTGCAGTTGGC
CTCGGGCGTTGATCTTCGCAGCTGGGATCGGGATAGACTGGTGGAGTGGT
TGAGGCAGGTTGTTGAGGATAGTCAGGGCGTGACTCATGTCTATTACTTG
GGTATAGCTATGTTCGAGGTGGTTGATGAATAGAGAGTTTACTTACAATG
AGTAGTCTTCACCGCTATGGACGACGACCTGGAAGAAGTCGCTACCAACC
GACGGATGCTGCAGAATGTCATTGATGCTCATAACCTAATCAGTCCCAAA
TTACAGTTCGTCTCCTTTGTGGGTGGGACACGGGTAAGCATAGTCTATCT
ATACAACTTGTGTAAGAAACACTTTTGACCAGATATCAACCAGGGATACG
GCATCTATTCCCCCGGCGGGACATTCATCCCACCGCTACACGAAGAATTG
GTTAACAACCTCCCTCCAGACTACGCCAAGACTGTCGTTTATCCCGCATA
TCGCGAGATACTCAGTACATCCAGCCAGGGAAGGAATTGGACTTGGTGTG
AAGTGTGTCCGGATGCAATTGTTAGTTCCTCCTTCACCTTCATCCTGACG
AATGCAACGATTAACTGTAACCGTAATAACAGGTTGGTTTCACCCCCAAT
GGATCGCAATTCAGTCTGGCATTGCACTGGGCGCAATACTTATCCCTATA
TGCCTACAATAATGGCATCGGACCACATACTCAGGGAAGCGCCAAGCCAG
CTGTAGAGGTCCCGTTCCCCGGATCCATAGCAGGCGCTACGTCGTTATTT
ACTCCCGTATCCAGTAACCGACTTGCACGGTTCATGATATTTGCATCCTT
ACATCCAGAGACGTGCGGGGGTGGTCGGCTGTTCAATGTCGCTGACCAGC
CGACACCTTGTACGTACGGATCACTGTGGCCTCGGCTGGCAGAATGGTTT
GGTCTCGTGGGCGTGCCGCCTGTTGACCCTGCTCCAGAAGGCGAGCATAA
TAAGCTAAAAGTTGGGGAAGTCCCTGAGCGGGCTTCAACGCTCGCGCCTG
GAGAGTATATAACTAAATATCGGGAAATCTTTACCCGTTATGGATGTCCG
AAAGCTGTTACTGGCGGGGTCGGAGTGGGGTATCGTCAGTTGGATAGTGT
CGGGTATTGGTTAACTTTTGATCGGCAGTTGAGTCTGGAAAAGCTTCAGG
AGACTGGCTTTGAGGGGAATCAGGATCCGGTAGAGGGCTGGTTGGAGAGT
TTTGCGATGTTTCGCAGGGCGGGGTTGATTCTGTGA back to topCoding sequence (CDS) from alignment at An08:2337617..2339052- >CBS51388_005715-T1 ID=CBS51388_005715-T1|Name=CBS51388_005715-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4968bp|location=Sequence derived from alignment at An08:2337617..2339052- (Aspergillus niger CBS 513.88)
GTTGGTTTCACCCCCAATGGATCGCAATTCAGTCTGGCATTGCACTGGGC
GCAATACTTATCCCTATATGCCTACAATAATGGCATCGGACCACATACTC
AGGGAAGCGCCAAGCCAGCTGTAGAGGTCCCGTTCCCCGGATCCATAGCA
GGCGCTACGTCGTTATTTACTCCCGTATCCAGTAACCGACTTGCACGGTT
CATGATATTTGCATCCTTACATCCAGAGACGTGCGGGGGTGGTCGGCTGT
TCAATGTCGCTGACCAGCCGACACCTTGTACGTACGGATCACTGTGGCCT
CGGCTGGCAGAATGGTTTGGTCTCGTGGGCGTGCCGCCTGTTGACCCTGC
TCCAGAAGGCGAGCATAATAAGCTAAAAGTTGGGGAAGTCCCTGAGCGGG
CTTCAACGCTCGCGCCTGGAGAGTATATAACTAAATATCGGGAAATCTTT
ACCCGTTATGGATGTCCGAAAGCTGTTACTGGCGGGGTCGGAGTGGGGTA
TCGTCAGTTGGATAGTGTCGGGTATTGGTTAACTTTTGATCGGCAGTTGA
GTCTGGAAAAGCTTCAGGAGACTGGCTTTGAGGGGAATCAGGATCCGGTA
GAGGGCTGGTTGGAGAGTTTTGCGATGTTTCGCAGGGCGGGGTTGATTCT
GTGAGGATACGGCATCTATTCCCCCGGCGGGACATTCATCCCACCGCTAC
ACGAAGAATTGGTTAACAACCTCCCTCCAGACTACGCCAAGACTGTCGTT
TATCCCGCATATCGCGAGATACTCAGTACATCCAGCCAGGGAAGGAATTG
GACTTGGTGTGAATCTTCACCGCTATGGACGACGACCTGGAAGAAGTCGC
TACCAACCGACGGATGCTGCAGAATGTCATTGATGCTCATAACCTAATCA
GTCCCAAATTACAGTTCGTCTCCTTTGTGGGTGGGACACGGATGCCACCA
AACACTCCCGGCCATGCGATTGTTTACGGCGCATCAGGTTTAATTGGCTG
GGCGCTAATAAACCAGCTCTTAAGTCCGTACCCTGTCGCTGATACATTCA
AAAAGGTCACAGCTGTCACGAATAGACCACTCGATCTCTCTGAGACATAC
TGGCCAGAGGCAGACTCTCACCGGCCCCGGCTGCAGTTGGCCTCGGGCGT
TGATCTTCGCAGCTGGGATCGGGATAGACTGGTGGAGTGGTTGAGGCAGG
TTGTTGAGGATAGTCAGGGCGTGACTCATGTCTATTACTTGGGTTGGTTT
CACCCCCAATGGATCGCAATTCAGTCTGGCATTGCACTGGGCGCAATACT
TATCCCTATATGCCTACAATAATGGCATCGGACCACATACTCAGGGAAGC
GCCAAGCCAGCTGTAGAGGTCCCGTTCCCCGGATCCATAGCAGGCGCTAC
GTCGTTATTTACTCCCGTATCCAGTAACCGACTTGCACGGTTCATGATAT
TTGCATCCTTACATCCAGAGACGTGCGGGGGTGGTCGGCTGTTCAATGTC
GCTGACCAGCCGACACCTTGTACGTACGGATCACTGTGGCCTCGGCTGGC
AGAATGGTTTGGTCTCGTGGGCGTGCCGCCTGTTGACCCTGCTCCAGAAG
GCGAGCATAATAAGCTAAAAGTTGGGGAAGTCCCTGAGCGGGCTTCAACG
CTCGCGCCTGGAGAGTATATAACTAAATATCGGGAAATCTTTACCCGTTA
TGGATGTCCGAAAGCTGTTACTGGCGGGGTCGGAGTGGGGTATCGTCAGT
TGGATAGTGTCGGGTATTGGTTAACTTTTGATCGGCAGTTGAGTCTGGAA
AAGCTTCAGGAGACTGGCTTTGAGGGGAATCAGGATCCGGTAGAGGGCTG
GTTGGAGAGTTTTGCGATGTTTCGCAGGGCGGGGTTGATTCTGTGAGGAT
ACGGCATCTATTCCCCCGGCGGGACATTCATCCCACCGCTACACGAAGAA
TTGGTTAACAACCTCCCTCCAGACTACGCCAAGACTGTCGTTTATCCCGC
ATATCGCGAGATACTCAGTACATCCAGCCAGGGAAGGAATTGGACTTGGT
GTGAATCTTCACCGCTATGGACGACGACCTGGAAGAAGTCGCTACCAACC
GACGGATGCTGCAGAATGTCATTGATGCTCATAACCTAATCAGTCCCAAA
TTACAGTTCGTCTCCTTTGTGGGTGGGACACGGATGCCACCAAACACTCC
CGGCCATGCGATTGTTTACGGCGCATCAGGTTTAATTGGCTGGGCGCTAA
TAAACCAGCTCTTAAGTCCGTACCCTGTCGCTGATACATTCAAAAAGGTC
ACAGCTGTCACGAATAGACCACTCGATCTCTCTGAGACATACTGGCCAGA
GGCAGACTCTCACCGGCCCCGGCTGCAGTTGGCCTCGGGCGTTGATCTTC
GCAGCTGGGATCGGGATAGACTGGTGGAGTGGTTGAGGCAGGTTGTTGAG
GATAGTCAGGGCGTGACTCATGTCTATTACTTGGGTTGGTTTCACCCCCA
ATGGATCGCAATTCAGTCTGGCATTGCACTGGGCGCAATACTTATCCCTA
TATGCCTACAATAATGGCATCGGACCACATACTCAGGGAAGCGCCAAGCC
AGCTGTAGAGGTCCCGTTCCCCGGATCCATAGCAGGCGCTACGTCGTTAT
TTACTCCCGTATCCAGTAACCGACTTGCACGGTTCATGATATTTGCATCC
TTACATCCAGAGACGTGCGGGGGTGGTCGGCTGTTCAATGTCGCTGACCA
GCCGACACCTTGTACGTACGGATCACTGTGGCCTCGGCTGGCAGAATGGT
TTGGTCTCGTGGGCGTGCCGCCTGTTGACCCTGCTCCAGAAGGCGAGCAT
AATAAGCTAAAAGTTGGGGAAGTCCCTGAGCGGGCTTCAACGCTCGCGCC
TGGAGAGTATATAACTAAATATCGGGAAATCTTTACCCGTTATGGATGTC
CGAAAGCTGTTACTGGCGGGGTCGGAGTGGGGTATCGTCAGTTGGATAGT
GTCGGGTATTGGTTAACTTTTGATCGGCAGTTGAGTCTGGAAAAGCTTCA
GGAGACTGGCTTTGAGGGGAATCAGGATCCGGTAGAGGGCTGGTTGGAGA
GTTTTGCGATGTTTCGCAGGGCGGGGTTGATTCTGTGAGGATACGGCATC
TATTCCCCCGGCGGGACATTCATCCCACCGCTACACGAAGAATTGGTTAA
CAACCTCCCTCCAGACTACGCCAAGACTGTCGTTTATCCCGCATATCGCG
AGATACTCAGTACATCCAGCCAGGGAAGGAATTGGACTTGGTGTGAATCT
TCACCGCTATGGACGACGACCTGGAAGAAGTCGCTACCAACCGACGGATG
CTGCAGAATGTCATTGATGCTCATAACCTAATCAGTCCCAAATTACAGTT
CGTCTCCTTTGTGGGTGGGACACGGATGCCACCAAACACTCCCGGCCATG
CGATTGTTTACGGCGCATCAGGTTTAATTGGCTGGGCGCTAATAAACCAG
CTCTTAAGTCCGTACCCTGTCGCTGATACATTCAAAAAGGTCACAGCTGT
CACGAATAGACCACTCGATCTCTCTGAGACATACTGGCCAGAGGCAGACT
CTCACCGGCCCCGGCTGCAGTTGGCCTCGGGCGTTGATCTTCGCAGCTGG
GATCGGGATAGACTGGTGGAGTGGTTGAGGCAGGTTGTTGAGGATAGTCA
GGGCGTGACTCATGTCTATTACTTGGGTTGGTTTCACCCCCAATGGATCG
CAATTCAGTCTGGCATTGCACTGGGCGCAATACTTATCCCTATATGCCTA
CAATAATGGCATCGGACCACATACTCAGGGAAGCGCCAAGCCAGCTGTAG
AGGTCCCGTTCCCCGGATCCATAGCAGGCGCTACGTCGTTATTTACTCCC
GTATCCAGTAACCGACTTGCACGGTTCATGATATTTGCATCCTTACATCC
AGAGACGTGCGGGGGTGGTCGGCTGTTCAATGTCGCTGACCAGCCGACAC
CTTGTACGTACGGATCACTGTGGCCTCGGCTGGCAGAATGGTTTGGTCTC
GTGGGCGTGCCGCCTGTTGACCCTGCTCCAGAAGGCGAGCATAATAAGCT
AAAAGTTGGGGAAGTCCCTGAGCGGGCTTCAACGCTCGCGCCTGGAGAGT
ATATAACTAAATATCGGGAAATCTTTACCCGTTATGGATGTCCGAAAGCT
GTTACTGGCGGGGTCGGAGTGGGGTATCGTCAGTTGGATAGTGTCGGGTA
TTGGTTAACTTTTGATCGGCAGTTGAGTCTGGAAAAGCTTCAGGAGACTG
GCTTTGAGGGGAATCAGGATCCGGTAGAGGGCTGGTTGGAGAGTTTTGCG
ATGTTTCGCAGGGCGGGGTTGATTCTGTGAGGATACGGCATCTATTCCCC
CGGCGGGACATTCATCCCACCGCTACACGAAGAATTGGTTAACAACCTCC
CTCCAGACTACGCCAAGACTGTCGTTTATCCCGCATATCGCGAGATACTC
AGTACATCCAGCCAGGGAAGGAATTGGACTTGGTGTGAATCTTCACCGCT
ATGGACGACGACCTGGAAGAAGTCGCTACCAACCGACGGATGCTGCAGAA
TGTCATTGATGCTCATAACCTAATCAGTCCCAAATTACAGTTCGTCTCCT
TTGTGGGTGGGACACGGATGCCACCAAACACTCCCGGCCATGCGATTGTT
TACGGCGCATCAGGTTTAATTGGCTGGGCGCTAATAAACCAGCTCTTAAG
TCCGTACCCTGTCGCTGATACATTCAAAAAGGTCACAGCTGTCACGAATA
GACCACTCGATCTCTCTGAGACATACTGGCCAGAGGCAGACTCTCACCGG
CCCCGGCTGCAGTTGGCCTCGGGCGTTGATCTTCGCAGCTGGGATCGGGA
TAGACTGGTGGAGTGGTTGAGGCAGGTTGTTGAGGATAGTCAGGGCGTGA
CTCATGTCTATTACTTGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2337617..2339052 - |
|
