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CBS51388_005733-T1, CBS51388_005733-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005733-T1
Unique NameCBS51388_005733-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2387448..2388507+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005733-T1 ID=CBS51388_005733-T1|Name=CBS51388_005733-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1060bp|location=Sequence derived from alignment at An08:2387448..2388507+ (Aspergillus niger CBS 513.88)
ATGGCTGCTCAGGTACCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGG
TACTGGAAAGGCAAGTTAAAACAAGAATTTCTTATCCTATATGGCTTACC
GGGTGGAGGTGGCATGTCACCTCTTCGACGCCTCTTTATGCTCGACTGCA
TTCCTGCCATGCGCGTTTACCCCTCTCTGTTGCCCGTCGTCTCTATCAAC
AGAAAACTTCATCGCCCGCCCAACCTCACCCAGACAAGACATCATTACTG
ACTGAGAATTTTCACTGCAGACCACCTTCGTCAAGCGCCACTTGACTGGC
GAGTTCGAGAAGAAGTACATCGCCACTCTCGGTGTCGAAGTGCACCCTCT
CGCTTTTAACACCGTATGCCCCGCCGGAAACCCCGCTTTGTCCATTCCGC
CGTCTTTGTGCCGGTCCGACTAACGCTTTTGCCAGAACCTGGGTAACATC
CAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCG
CGATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATGTTA
CCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCGTAAGTGCTTC
CACAAATCAGCACTCGAACCACGCGCAATCTGGATCAAATTGACAAATTC
ACTCTAGGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTG
CGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCA
CCTTCCACCGCAAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCC
AACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGG
CAACCCCCAGCTGGTAAGTCAGACACGGTCATTGGTCGCTTTCACTGGTG
AGACTGGAAGCTAACAAGCATTTCCCAGGAATTCGTTGCTGCCCCCGCTC
TTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTTCTGGCCCAGTACGAG
AAGGAGATGGACGCTGCTGCCAACATGCCCCTGCCCGACGAGGAGGACGC
CGATTTGTAA
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Coding sequence (CDS) from alignment at An08:2387448..2388507+

>CBS51388_005733-T1 ID=CBS51388_005733-T1|Name=CBS51388_005733-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3225bp|location=Sequence derived from alignment at An08:2387448..2388507+ (Aspergillus niger CBS 513.88)
ATGGCTGCTCAGGTACCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGG
TACTGGAAAGACCACCTTCGTCAAGCGCCACTTGACTGGCGAGTTCGAGA
AGAAGTACATCGCCACTCTCGGTGTCGAAGTGCACCCTCTCGCTTTTAAC
ACCAACCTGGGTAACATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGA
GAAGTTCGGTGGTCTTCGCGATGGTTACTACATCAACGGACAGTGCGGTA
TCATCATGTTCGATGTTACCTCCCGTATCACCTACAAGAACGTCCCCAAC
TGGCACCGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTG
CGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCA
CCTTCCACCGCAAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCC
AACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGG
CAACCCCCAGCTGGAATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGG
TCCAAGTCAACCCGGAGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCT
GCTGCCAACATGCCCCTGCCCGACGAGGAGGACGCCGATTTGTAAATGGC
TGCTCAGGTACCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTG
GAAAGACCACCTTCGTCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAG
TACATCGCCACTCTCGGTGTCGAAGTGCACCCTCTCGCTTTTAACACCAA
CCTGGGTAACATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGT
TCGGTGGTCTTCGCGATGGTTACTACATCAACGGACAGTGCGGTATCATC
ATGTTCGATGTTACCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCA
CCGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTGCGGTA
ACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCACCTTC
CACCGCAAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCCAACTA
CAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGGCAACC
CCCAGCTGGAATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAA
GTCAACCCGGAGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGC
CAACATGCCCCTGCCCGACGAGGAGGACGCCGATTTGTAAATGGCTGCTC
AGGTACCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAG
ACCACCTTCGTCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACAT
CGCCACTCTCGGTGTCGAAGTGCACCCTCTCGCTTTTAACACCAACCTGG
GTAACATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGT
GGTCTTCGCGATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTT
CGATGTTACCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCGTG
ATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTGCGGTAACAAG
GTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCACCTTCCACCG
CAAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCCAACTACAATT
TCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGGCAACCCCCAG
CTGGAATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAA
CCCGGAGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACA
TGCCCCTGCCCGACGAGGAGGACGCCGATTTGTAAATGGCTGCTCAGGTA
CCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAGACCAC
CTTCGTCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCA
CTCTCGGTGTCGAAGTGCACCCTCTCGCTTTTAACACCAACCTGGGTAAC
ATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCT
TCGCGATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATG
TTACCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCGTGATCTC
GTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTGCGGTAACAAGGTCGA
TGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCACCTTCCACCGCAAGA
AGAACCTCCAGTACTACGACATCTCCGCCAAGTCCAACTACAATTTCGAG
AAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGGCAACCCCCAGCTGGA
ATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGG
AGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCC
CTGCCCGACGAGGAGGACGCCGATTTGTAAATGGCTGCTCAGGTACCGAC
CTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAGACCACCTTCG
TCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCACTCTC
GGTGTCGAAGTGCACCCTCTCGCTTTTAACACCAACCTGGGTAACATCCA
GTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCGCG
ATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATGTTACC
TCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCGTGATCTCGTCCG
TGTCTGCGAGGGTATCCCCATCGTGCTGTGCGGTAACAAGGTCGATGTTA
AGGAGCGTAAGGTGAAGGCCAAGACCATCACCTTCCACCGCAAGAAGAAC
CTCCAGTACTACGACATCTCCGCCAAGTCCAACTACAATTTCGAGAAGCC
CTTCCTCTGGCTCGCTCGCAAGTTGGTCGGCAACCCCCAGCTGGAATTCG
TTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTT
CTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCCCTGCC
CGACGAGGAGGACGCCGATTTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006913nucleocytoplasmic transport
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GSP1CBS51388_005733Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005733-T1CBS51388_005733-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005733-T1.exon1CBS51388_005733-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005733-T1.exon2CBS51388_005733-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005733-T1.exon3CBS51388_005733-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_005733-T1.exon4CBS51388_005733-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_005733-T1.exon5CBS51388_005733-T1.exon5Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005733-T1.cdsCBS51388_005733-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
NoteBUSCO:EOG09264LKR
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR002041
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
ProductGTP-binding nuclear protein gsp1/Ran
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2387448..2388507 +
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