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CBS51388_005769-T1, CBS51388_005769-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005769-T1
Unique NameCBS51388_005769-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2509197..2510261-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005769-T1 ID=CBS51388_005769-T1|Name=CBS51388_005769-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1065bp|location=Sequence derived from alignment at An08:2509197..2510261- (Aspergillus niger CBS 513.88)
ATGTTTGTAAAAGCACCCTGCGGAGGCTGCGTGGAGAAGAGTGATGCAAA
ACATGCAAACACGCCCGAGATTTCTGAAATTCTCGGCGAACTCGTCCGCG
GCCGCCATGCTCCTCCGGCCTGGACAGCAAGCCTCACATCAAGCCCCATC
GTGCTCAGCCGGGTCAATCGCCATTTAACTGCTATCTCGCTGAGCGGATA
GACTTTCAACTTTTCTCGGAGCTTTCCGAAGGCCGACACCTCCCGTCGCT
CCCTTGCCCGGCACCACCGCAACGGTCTACAAAAACTCCCGTCCAAGCGG
ATTGACCTGGCCGTGCTTCTTCCCCAGCACCACCTCTACAACAAAAGGAG
CATTCAGTCCTTCATACACACCACCACAATGCGTCCCGCCAATCTTCTCC
GGGCTCTCCAGCCCCTGCGCTCCTCCATGATGCGCTCCACCACCACCACT
ACCTCCTCCACAACAGCGCCCTCCCTATACCAAACCACTCGGCGCTCTCT
CACGACCACCGTCCCCCGACTTAACGAGCAACAACAACAACAACCCCAAC
AAGAAGCAGACCTGTCATCCTCCTCCACTACTACCACCACCACCGTCGTC
CCTCCCTCCCTCCGCAGCTACCCCTACAAGACCAAAACCGGCACTGTCGT
CTCCGTCGGCCGTATGGACCGCACTGTCCGCGTCAGCCACCGCCACACCA
TCTGGGACGCGCACATCCAGAAGCCCTACCCCAAGATAACTACCTACCTG
GTTTCGGATCCGCGGAACTCGCTGCGCGAGGGCGACGTCATTGAGTTCTC
GTCCGGGTACCCGAAGAGCCGGAATGTGCGGCACGTTGTCGAGAGAATCA
TTGCGCCGTTTGGATCTGCTATTGAAGATAGACCGGCTGTTATGACCCGC
GAGGAGAGGGATGCTGAGCGTGCGGCAAAGAGGGCTGCTAAGTGGGAGCG
TAGGGAGGCGAGGAGGGTGGAGGCTGGTGTCCCTGAGGGTGAGGGGAAGG
TTGGGGAGCATGTTGGGAGGATTAGGAGGTTGGTACTTGAGAGAACTGGT
GGGGTTGAGGTTTGA
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Coding sequence (CDS) from alignment at An08:2509197..2510261-

>CBS51388_005769-T1 ID=CBS51388_005769-T1|Name=CBS51388_005769-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1992bp|location=Sequence derived from alignment at An08:2509197..2510261- (Aspergillus niger CBS 513.88)
GCCGACACCTCCCGTCGCTCCCTTGCCCGGCACCACCGCAACGGTCTACA
AAAACTCCCGTCCAAGCGGATTGACCTGGCCGTGCTTCTTCCCCAGCACC
ACCTCTACAACAAAAGGAGCATTCAGTCCTTCATACACACCACCACAATG
CGTCCCGCCAATCTTCTCCGGGCTCTCCAGCCCCTGCGCTCCTCCATGAT
GCGCTCCACCACCACCACTACCTCCTCCACAACAGCGCCCTCCCTATACC
AAACCACTCGGCGCTCTCTCACGACCACCGTCCCCCGACTTAACGAGCAA
CAACAACAACAACCCCAACAAGAAGCAGACCTGTCATCCTCCTCCACTAC
TACCACCACCACCGTCGTCCCTCCCTCCCTCCGCAGCTACCCCTACAAGA
CCAAAACCGGCACTGTCGTCTCCGTCGGCCGTATGGACCGCACTGTCCGC
GTCAGCCACCGCCACACCATCTGGGACGCGCACATCCAGAAGCCCTACCC
CAAGATAACTACCTACCTGGTTTCGGATCCGCGGAACTCGCTGCGCGAGG
GCGACGTCATTGAGTTCTCGTCCGGGTACCCGAAGAGCCGGAATGTGCGG
CACGTTGTCGAGAGAATCATTGCGCCGTTTGGATCTGCTATTGAAGATAG
ACCGGCTGTTATGACCCGCGAGGAGAGGGATGCTGAGCGTGCGGCAAAGA
GGGCTGCTAAGTGGGAGCGTAGGGAGGCGAGGAGGGTGGAGGCTGGTGTC
CCTGAGGGTGAGGGGAAGGTTGGGGAGCATGTTGGGAGGATTAGGAGGTT
GGTACTTGAGAGAACTGGTGGGGTTGAGGTTTGAATGTTTGTAAAAGCAC
CCTGCGGAGGCTGCGTGGAGAAGAGTGATGCAAAACATGCAAACACGCCC
GAGATTTCTGAAATTCTCGGCGAACTCGTCCGCGGCCGCCATGCTCCTCC
GGCCTGGACAGCAAGCCTCACATCAAGCCCCATCGTGCTCAGCCGGGCCG
ACACCTCCCGTCGCTCCCTTGCCCGGCACCACCGCAACGGTCTACAAAAA
CTCCCGTCCAAGCGGATTGACCTGGCCGTGCTTCTTCCCCAGCACCACCT
CTACAACAAAAGGAGCATTCAGTCCTTCATACACACCACCACAATGCGTC
CCGCCAATCTTCTCCGGGCTCTCCAGCCCCTGCGCTCCTCCATGATGCGC
TCCACCACCACCACTACCTCCTCCACAACAGCGCCCTCCCTATACCAAAC
CACTCGGCGCTCTCTCACGACCACCGTCCCCCGACTTAACGAGCAACAAC
AACAACAACCCCAACAAGAAGCAGACCTGTCATCCTCCTCCACTACTACC
ACCACCACCGTCGTCCCTCCCTCCCTCCGCAGCTACCCCTACAAGACCAA
AACCGGCACTGTCGTCTCCGTCGGCCGTATGGACCGCACTGTCCGCGTCA
GCCACCGCCACACCATCTGGGACGCGCACATCCAGAAGCCCTACCCCAAG
ATAACTACCTACCTGGTTTCGGATCCGCGGAACTCGCTGCGCGAGGGCGA
CGTCATTGAGTTCTCGTCCGGGTACCCGAAGAGCCGGAATGTGCGGCACG
TTGTCGAGAGAATCATTGCGCCGTTTGGATCTGCTATTGAAGATAGACCG
GCTGTTATGACCCGCGAGGAGAGGGATGCTGAGCGTGCGGCAAAGAGGGC
TGCTAAGTGGGAGCGTAGGGAGGCGAGGAGGGTGGAGGCTGGTGTCCCTG
AGGGTGAGGGGAAGGTTGGGGAGCATGTTGGGAGGATTAGGAGGTTGGTA
CTTGAGAGAACTGGTGGGGTTGAGGTTTGAATGTTTGTAAAAGCACCCTG
CGGAGGCTGCGTGGAGAAGAGTGATGCAAAACATGCAAACACGCCCGAGA
TTTCTGAAATTCTCGGCGAACTCGTCCGCGGCCGCCATGCTCCTCCGGCC
TGGACAGCAAGCCTCACATCAAGCCCCATCGTGCTCAGCCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005769CBS51388_005769Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005769-T1CBS51388_005769-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005769-T1.cdsCBS51388_005769-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005769-T1.exon2CBS51388_005769-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005769-T1.exon1CBS51388_005769-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR000266
DBxrefPFAM:PF00366
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2509197..2510261 -
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