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CBS51388_005784-T1, CBS51388_005784-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005784-T1
Unique NameCBS51388_005784-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2553833..2554907-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005784-T1 ID=CBS51388_005784-T1|Name=CBS51388_005784-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1075bp|location=Sequence derived from alignment at An08:2553833..2554907- (Aspergillus niger CBS 513.88)
ATGACCTCCCCAGAGAATACCAATAAACCTCCCATCATCCTGCTCAAAAC
CAAATCCACCCCCCACGACAACTACTCCGACTACTTCCACCAACCCACCA
GCGACTACAATCCCACCTTCATCCCGGTCCTCTCGCACAACTTCCACACC
GAGAGACTACGCTCCATCCGCGCGCTCTTCACCTCCGGAGCCCTCCTCCC
TCCCCAATCTCAAGATAAAGATAAACACCATGCTCGAAAATACGGCGGCC
TGATCTTCACCAGCCAGCGCGCAGTCGAAGGCTTCGGCAGAGTACTTGCC
GAACTTGATGATGGTATGTTTTCCCTACCCCACCACCACCACCACAAACA
AATACTAACACATATATATAAACAAACCAGACCCCTCAGCAAAGCAAACA
ATAGCTTCCTCCTCCACAAACCTCCCAATCTACACCGTCGGGCCCGCAAC
CCACCGCTCCCTGACCACCATCGTGAACAGCTACCTACCGCACGCGAGCA
TCCACGGCGCGGATACAGGGAATGGAGAGGCATTAGCGAAGTTCATTCTC
CAACATTATAATTCTCTCTACACTACTACCCCGTCAGACACTAATGGGGA
TGTGTCGAAGCCACCGTTGCTTTTCCTTGTTGGTGAGCAACGACGGGATA
TTATCCCGCGGACACTTATGAGCTCGGAGCTTGTCCCGGAACAACGCATT
GGTGTGGATGAGGTGGTTGTGTATGAGACGGGGGTGATGGAGGGGTTTGA
GGGGCAGTTTAGGGGGGTTGTTGAGCGGGAGAGGGAGGTTATGAAGGGTG
ATAGTGATAGGGTGGTGTGGGTGGTGGTGTTTTCGCCGACGGGGTGTGAG
GGGATGTTGAGGGGGTTGGGATATTTTGATAATAAGGGTGGTAAGGGTGA
TTGGGGGGATAAGGGTGAAAGGAGGTTCTTTGTTGCGACGATTGGGCCGA
CGACGAGGGATCATTTGAGGAAGGAGTTTGGGTTTGAGGCGGATGTTTGT
GCGGAGAGGCCGAGTCCCGAGGGGGTGGGGGAGGGGATTGAGAGATTCAT
GAGGGAGAAGAAGAATTTGTCATGA
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Coding sequence (CDS) from alignment at An08:2553833..2554907-

>CBS51388_005784-T1 ID=CBS51388_005784-T1|Name=CBS51388_005784-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2016bp|location=Sequence derived from alignment at An08:2553833..2554907- (Aspergillus niger CBS 513.88)
ACCCCTCAGCAAAGCAAACAATAGCTTCCTCCTCCACAAACCTCCCAATC
TACACCGTCGGGCCCGCAACCCACCGCTCCCTGACCACCATCGTGAACAG
CTACCTACCGCACGCGAGCATCCACGGCGCGGATACAGGGAATGGAGAGG
CATTAGCGAAGTTCATTCTCCAACATTATAATTCTCTCTACACTACTACC
CCGTCAGACACTAATGGGGATGTGTCGAAGCCACCGTTGCTTTTCCTTGT
TGGTGAGCAACGACGGGATATTATCCCGCGGACACTTATGAGCTCGGAGC
TTGTCCCGGAACAACGCATTGGTGTGGATGAGGTGGTTGTGTATGAGACG
GGGGTGATGGAGGGGTTTGAGGGGCAGTTTAGGGGGGTTGTTGAGCGGGA
GAGGGAGGTTATGAAGGGTGATAGTGATAGGGTGGTGTGGGTGGTGGTGT
TTTCGCCGACGGGGTGTGAGGGGATGTTGAGGGGGTTGGGATATTTTGAT
AATAAGGGTGGTAAGGGTGATTGGGGGGATAAGGGTGAAAGGAGGTTCTT
TGTTGCGACGATTGGGCCGACGACGAGGGATCATTTGAGGAAGGAGTTTG
GGTTTGAGGCGGATGTTTGTGCGGAGAGGCCGAGTCCCGAGGGGGTGGGG
GAGGGGATTGAGAGATTCATGAGGGAGAAGAAGAATTTGTCATGAATGAC
CTCCCCAGAGAATACCAATAAACCTCCCATCATCCTGCTCAAAACCAAAT
CCACCCCCCACGACAACTACTCCGACTACTTCCACCAACCCACCAGCGAC
TACAATCCCACCTTCATCCCGGTCCTCTCGCACAACTTCCACACCGAGAG
ACTACGCTCCATCCGCGCGCTCTTCACCTCCGGAGCCCTCCTCCCTCCCC
AATCTCAAGATAAAGATAAACACCATGCTCGAAAATACGGCGGCCTGATC
TTCACCAGCCAGCGCGCAGTCGAAGGCTTCGGCAGAGTACTTGCCGAACT
TGATGATGACCCCTCAGCAAAGCAAACAATAGCTTCCTCCTCCACAAACC
TCCCAATCTACACCGTCGGGCCCGCAACCCACCGCTCCCTGACCACCATC
GTGAACAGCTACCTACCGCACGCGAGCATCCACGGCGCGGATACAGGGAA
TGGAGAGGCATTAGCGAAGTTCATTCTCCAACATTATAATTCTCTCTACA
CTACTACCCCGTCAGACACTAATGGGGATGTGTCGAAGCCACCGTTGCTT
TTCCTTGTTGGTGAGCAACGACGGGATATTATCCCGCGGACACTTATGAG
CTCGGAGCTTGTCCCGGAACAACGCATTGGTGTGGATGAGGTGGTTGTGT
ATGAGACGGGGGTGATGGAGGGGTTTGAGGGGCAGTTTAGGGGGGTTGTT
GAGCGGGAGAGGGAGGTTATGAAGGGTGATAGTGATAGGGTGGTGTGGGT
GGTGGTGTTTTCGCCGACGGGGTGTGAGGGGATGTTGAGGGGGTTGGGAT
ATTTTGATAATAAGGGTGGTAAGGGTGATTGGGGGGATAAGGGTGAAAGG
AGGTTCTTTGTTGCGACGATTGGGCCGACGACGAGGGATCATTTGAGGAA
GGAGTTTGGGTTTGAGGCGGATGTTTGTGCGGAGAGGCCGAGTCCCGAGG
GGGTGGGGGAGGGGATTGAGAGATTCATGAGGGAGAAGAAGAATTTGTCA
TGAATGACCTCCCCAGAGAATACCAATAAACCTCCCATCATCCTGCTCAA
AACCAAATCCACCCCCCACGACAACTACTCCGACTACTTCCACCAACCCA
CCAGCGACTACAATCCCACCTTCATCCCGGTCCTCTCGCACAACTTCCAC
ACCGAGAGACTACGCTCCATCCGCGCGCTCTTCACCTCCGGAGCCCTCCT
CCCTCCCCAATCTCAAGATAAAGATAAACACCATGCTCGAAAATACGGCG
GCCTGATCTTCACCAGCCAGCGCGCAGTCGAAGGCTTCGGCAGAGTACTT
GCCGAACTTGATGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0033014tetrapyrrole biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004852uroporphyrinogen-III synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005784CBS51388_005784Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005784-T1CBS51388_005784-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005784-T1.cdsCBS51388_005784-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005784-T1.exon2CBS51388_005784-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005784-T1.exon1CBS51388_005784-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG092634MM
DBxrefInterPro:IPR003754
DBxrefInterPro:IPR036108
DBxrefPFAM:PF02602
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2553833..2554907 -
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