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CBS51388_005787-T1, CBS51388_005787-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005787-T1
Unique NameCBS51388_005787-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2558688..2559960+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005787-T1 ID=CBS51388_005787-T1|Name=CBS51388_005787-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1273bp|location=Sequence derived from alignment at An08:2558688..2559960+ (Aspergillus niger CBS 513.88)
ATGGAGAACCAACGGATCTCCGATTTCCTCGCCGACCAGCTGCAGCAAGC
TCCCGAGCAATGCCAGGCCTATTTCCTGAGCTTCGAAGATTACTGGGAAC
GCAAACTATGGCATCAGCTTACGGATTCCTTGATTGAGTTCTTCCGTCTA
CCAGAGAGTGCAGCTCAGCGACTACCGATATTCAAGAGTTTCGTCCTCAG
CTTCGCCGACAGAATCAATCAGCTCAAGTTCGTTTCGCTGGGGTTGATGG
CGTCAACAGAATGCTCAAGTTTGTATCCCAGCTATCGATCGCTAGAGCTT
TCGCAATACAAAGCTATCGCTAACACTACTGCAACAGATGACCAAGAACG
CCTCACCTTCCTCACATCGCTGGCAGACAAAGTGAACAAGCCCGAGTCAC
AAGATGCTTACATCTACGCCCTCGCGGATGTCGCCAACGTCAAGCAACGG
CTACAAGACCTGAACGGTGCGCAGAAGGACCTGGAGACATGCCAGAAAGT
GCTGGACACGTTCGACTCCGTGGAGACCGTGGTGCACGCCTCCTTCTACA
AAGTCAACGCGGACTACTACCACGTATGTACCCCCCGCACCTGCCACCTG
GGACTCACTAACCTTTCTCCCCCTTCTACAGACCAAACAAGAATTCGCCT
CCTTCTACAAGAATGCCCTCCTATACCTCGCCTGCATCAACCTCGAGGAT
CTCAGCGAAGCCGAGCGCGTCTCCCGCGCATACAACCTCAGTGTGGCCGC
GCTCGTCTCCGACACCATCTACAACTTTGGTGAACTACTCCTGCACCCGA
TCCTGGACTCCCTCACCGAGACGCCGCACAGCTGGCTGCGCGAGCTCCTG
TTCGCCTTCAACCGCGGCGACCTGACCGCCTACGACGTCCTCGCCGGAAA
CATCTCCAAGAACCAGCTGCTTGAGCAGCACCGCATTTTCCTATACCAGA
AGATCTCCCTGTCCGCGCTGACGGAGATGGTTTTCCGCCGGCCCCCGCAC
GACCGCAACCTGACTTTCTCGGCCATCTCCGCCGAAACGAAGGTCAAGCC
CCAGGAGATCGAGCATCTGATCATGAAGGCCCTGTCGCTGGGTTTGCTCA
AGGGTGCCATTGATCAGGTGGCTCAGGTCGCCCAGATCAACTGGGTGCAG
CCGAAGGTGCTGGATATGAAGCAGATCGAGGGCATGCGGAACCGTCTGAG
GGATTGGGATGCTGGTGTCAACCAGCTGGGTCACTGGATTGAGGGCGTTG
GAAAGGATGTGTGGGCTGCATAA
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Coding sequence (CDS) from alignment at An08:2558688..2559960+

>CBS51388_005787-T1 ID=CBS51388_005787-T1|Name=CBS51388_005787-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3438bp|location=Sequence derived from alignment at An08:2558688..2559960+ (Aspergillus niger CBS 513.88)
ATGGAGAACCAACGGATCTCCGATTTCCTCGCCGACCAGCTGCAGCAAGC
TCCCGAGCAATGCCAGGCCTATTTCCTGAGCTTCGAAGATTACTGGGAAC
GCAAACTATGGCATCAGCTTACGGATTCCTTGATTGAGTTCTTCCGTCTA
CCAGAGAGTGCAGCTCAGCGACTACCGATATTCAAGAGTTTCGTCCTCAG
CTTCGCCGACAGAATCAATCAGCTCAAGTTCGTTTCGCTGGGGTTGATGG
CGTCAACAGAATGCTCAAATGACCAAGAACGCCTCACCTTCCTCACATCG
CTGGCAGACAAAGTGAACAAGCCCGAGTCACAAGATGCTTACATCTACGC
CCTCGCGGATGTCGCCAACGTCAAGCAACGGCTACAAGACCTGAACGGTG
CGCAGAAGGACCTGGAGACATGCCAGAAAGTGCTGGACACGTTCGACTCC
GTGGAGACCGTGGTGCACGCCTCCTTCTACAAAGTCAACGCGGACTACTA
CCACACCAAACAAGAATTCGCCTCCTTCTACAAGAATGCCCTCCTATACC
TCGCCTGCATCAACCTCGAGGATCTCAGCGAAGCCGAGCGCGTCTCCCGC
GCATACAACCTCAGTGTGGCCGCGCTCGTCTCCGACACCATCTACAACTT
TGGTGAACTACTCCTGCACCCGATCCTGGACTCCCTCACCGAGACGCCGC
ACAGCTGGCTGCGCGAGCTCCTGTTCGCCTTCAACCGCGGCGACCTGACC
GCCTACGACGTCCTCGCCGGAAACATCTCCAAGAACCAGCTGCTTGAGCA
GCACCGCATTTTCCTATACCAGAAGATCTCCCTGTCCGCGCTGACGGAGA
TGGTTTTCCGCCGGCCCCCGCACGACCGCAACCTGACTTTCTCGGCCATC
TCCGCCGAAACGAAGGTCAAGCCCCAGGAGATCGAGCATCTGATCATGAA
GGCCCTGTCGCTGGGTTTGCTCAAGGGTGCCATTGATCAGGTGGCTCAGG
TCGCCCAGATCAACTGGGTGCAGCCGAAGGTGCTGGATATGAAGCAGATC
GAGGGCATGCGGAACCGTCTGAGGGATTGGGATGCTGGTGTCAACCAGCT
GGGTCACTGGATTGAGGGCGTTGGAAAGGATGTGTGGGCTGCATAAATGG
AGAACCAACGGATCTCCGATTTCCTCGCCGACCAGCTGCAGCAAGCTCCC
GAGCAATGCCAGGCCTATTTCCTGAGCTTCGAAGATTACTGGGAACGCAA
ACTATGGCATCAGCTTACGGATTCCTTGATTGAGTTCTTCCGTCTACCAG
AGAGTGCAGCTCAGCGACTACCGATATTCAAGAGTTTCGTCCTCAGCTTC
GCCGACAGAATCAATCAGCTCAAGTTCGTTTCGCTGGGGTTGATGGCGTC
AACAGAATGCTCAAATGACCAAGAACGCCTCACCTTCCTCACATCGCTGG
CAGACAAAGTGAACAAGCCCGAGTCACAAGATGCTTACATCTACGCCCTC
GCGGATGTCGCCAACGTCAAGCAACGGCTACAAGACCTGAACGGTGCGCA
GAAGGACCTGGAGACATGCCAGAAAGTGCTGGACACGTTCGACTCCGTGG
AGACCGTGGTGCACGCCTCCTTCTACAAAGTCAACGCGGACTACTACCAC
ACCAAACAAGAATTCGCCTCCTTCTACAAGAATGCCCTCCTATACCTCGC
CTGCATCAACCTCGAGGATCTCAGCGAAGCCGAGCGCGTCTCCCGCGCAT
ACAACCTCAGTGTGGCCGCGCTCGTCTCCGACACCATCTACAACTTTGGT
GAACTACTCCTGCACCCGATCCTGGACTCCCTCACCGAGACGCCGCACAG
CTGGCTGCGCGAGCTCCTGTTCGCCTTCAACCGCGGCGACCTGACCGCCT
ACGACGTCCTCGCCGGAAACATCTCCAAGAACCAGCTGCTTGAGCAGCAC
CGCATTTTCCTATACCAGAAGATCTCCCTGTCCGCGCTGACGGAGATGGT
TTTCCGCCGGCCCCCGCACGACCGCAACCTGACTTTCTCGGCCATCTCCG
CCGAAACGAAGGTCAAGCCCCAGGAGATCGAGCATCTGATCATGAAGGCC
CTGTCGCTGGGTTTGCTCAAGGGTGCCATTGATCAGGTGGCTCAGGTCGC
CCAGATCAACTGGGTGCAGCCGAAGGTGCTGGATATGAAGCAGATCGAGG
GCATGCGGAACCGTCTGAGGGATTGGGATGCTGGTGTCAACCAGCTGGGT
CACTGGATTGAGGGCGTTGGAAAGGATGTGTGGGCTGCATAAATGGAGAA
CCAACGGATCTCCGATTTCCTCGCCGACCAGCTGCAGCAAGCTCCCGAGC
AATGCCAGGCCTATTTCCTGAGCTTCGAAGATTACTGGGAACGCAAACTA
TGGCATCAGCTTACGGATTCCTTGATTGAGTTCTTCCGTCTACCAGAGAG
TGCAGCTCAGCGACTACCGATATTCAAGAGTTTCGTCCTCAGCTTCGCCG
ACAGAATCAATCAGCTCAAGTTCGTTTCGCTGGGGTTGATGGCGTCAACA
GAATGCTCAAATGACCAAGAACGCCTCACCTTCCTCACATCGCTGGCAGA
CAAAGTGAACAAGCCCGAGTCACAAGATGCTTACATCTACGCCCTCGCGG
ATGTCGCCAACGTCAAGCAACGGCTACAAGACCTGAACGGTGCGCAGAAG
GACCTGGAGACATGCCAGAAAGTGCTGGACACGTTCGACTCCGTGGAGAC
CGTGGTGCACGCCTCCTTCTACAAAGTCAACGCGGACTACTACCACACCA
AACAAGAATTCGCCTCCTTCTACAAGAATGCCCTCCTATACCTCGCCTGC
ATCAACCTCGAGGATCTCAGCGAAGCCGAGCGCGTCTCCCGCGCATACAA
CCTCAGTGTGGCCGCGCTCGTCTCCGACACCATCTACAACTTTGGTGAAC
TACTCCTGCACCCGATCCTGGACTCCCTCACCGAGACGCCGCACAGCTGG
CTGCGCGAGCTCCTGTTCGCCTTCAACCGCGGCGACCTGACCGCCTACGA
CGTCCTCGCCGGAAACATCTCCAAGAACCAGCTGCTTGAGCAGCACCGCA
TTTTCCTATACCAGAAGATCTCCCTGTCCGCGCTGACGGAGATGGTTTTC
CGCCGGCCCCCGCACGACCGCAACCTGACTTTCTCGGCCATCTCCGCCGA
AACGAAGGTCAAGCCCCAGGAGATCGAGCATCTGATCATGAAGGCCCTGT
CGCTGGGTTTGCTCAAGGGTGCCATTGATCAGGTGGCTCAGGTCGCCCAG
ATCAACTGGGTGCAGCCGAAGGTGCTGGATATGAAGCAGATCGAGGGCAT
GCGGAACCGTCTGAGGGATTGGGATGCTGGTGTCAACCAGCTGGGTCACT
GGATTGAGGGCGTTGGAAAGGATGTGTGGGCTGCATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005787CBS51388_005787Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005787-T1.exon1CBS51388_005787-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005787-T1.exon2CBS51388_005787-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005787-T1.exon3CBS51388_005787-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005787-T1.cdsCBS51388_005787-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005787-T1CBS51388_005787-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR000717
DBxrefPFAM:PF18261
DBxrefPFAM:PF01399
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2558688..2559960 +
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