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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2635794..2637735- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005815-T1 ID=CBS51388_005815-T1|Name=CBS51388_005815-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1942bp|location=Sequence derived from alignment at An08:2635794..2637735- (Aspergillus niger CBS 513.88)
ATGAAGCTTCAAACGGCTTCCGTACTGCTCGGCAGTGCTGCTGCTGCCTC
GCCTTCCATGCAGACGCGGGCCTCCGTTGTCATCGACTACAATGTCGCAC
CTCCAAACCTATCCACTCTGCCCAATGGCTCCCTCTTCGAAACATGGCGT
CCCCGCGCCCACGTCCTGCCCCCCAACGGCCAGATCGGTGACCCCTGCCT
GCATTACACCGATCCCTCCACGGGCCTCTTCCACGTCGGCTTCCTTCACG
ATGGCAGCGGCATCTCCAGCGCCACCACTGATGATCTAGCCACCTACAAG
GACCTCAACCAAGGCAACCAAGTCATTGTTCCCGGGGGTATCAACGACCC
CGTCGCCGTCTTCGATGGCTCCGTCATCCCCAGCGGCATCAACGGCCTCC
CCACTCTCCTCTACACCTCCGTCTCCTTCCTTCCCATCCACTGGTCCATC
CCCTACACCCGCGGCAGTGAGACCCAATCCCTCGCTGTCTCCTCGGATGG
CGGCAGCAACTTCACCAAGCTCGACCAGGGCCCCGTCATCCCTGGCCCTC
CCTTCGCCTACAACGTCACCGCATTCCGGGACCCCTACGTCTTCCAAAAC
CCCACCCTCGACTCCCTCCTGCACAGCAAGAACAACACCTGGTATACCGT
CATCTCCGGTGGTCTGCACGGCAAGGGCCCCGCCCAGTTCCTCTACCGCC
AGTACGACCCGGACTTCCAGTACTGGGAGTTCCTCGGCCAATGGTGGCAC
GAGCCCACCAACTCCACTTGGGGTAACGGCACCTGGGCCGGCCGATGGGC
CTTCAACTTCGAGACCGGCAACGTCTTCAGTCTCGACGAGTACGGATACA
ACCCCCACGGCCAGATCTTCTCCACGATCGGCACCGAGGGCTCTGACCAG
CCCGTCGTGCCCCAGCTCACCAGCATCCACGACATGCTCTGGGTGTCCGG
CAACGTCTCTCGCAATGGCTCTGTCTCGTTCACCCCGAACATGGCGGGCT
TCCTCGACTGGGGCTTCTCCTCTTACGCAGCTGCCGGAAAGGTCCTCCCC
TCGACTTCTCTGCCCTCGACGAAGAGCGGCGCCCCGGACCGCTTCATCTC
GTACGTCTGGCTGTCCGGTGACCTGTTCGAACAGGCCGAAGGGTTCCCCA
CGAACCAGCAGAATTGGACCGGTACGCTGTTGCTTCCGCGAGAGTTGCGC
GTGCTGTATATCCCCAATGTGGTGGACAATGCTCTGGCTCGGGAATCTGG
TGCCTCGTGGCAGGTCGTGAGCAGCGATAGCAGTGCGGGCACCGTGGAGC
TGCAGACACTGGGTATCTCCATTGCCCGGGAAACCAAGGCCGCCTTGCTG
TCGGGAACGTCGTTCACCGAGTCCGACCGTACTCTGAACAGCAGTGGTGT
TGTGCCGTTCAAGCGCTCCCCGTCCGAGAAGTTCTTTGTTTTGTCCGCGC
AGCTGTCCTTCCCTGCTTCGGCTAGGGGATCGGGACTCAAAAGTGGATTC
CAGATCCTCTCGTCGGAGCTGGAAAGCACCACTGTCTACTACCAGTTCTC
GAATGAGTCGATTATTGTCGACCGCAGTAACACCAGTGCTGCGGCGCGTA
CCACGGATGGTATCGATAGCAGTGCGGAGGCTGGCAAGTTGCGCCTGTTT
GACGTGTTGAATGGCGGAGAGCAGGCGATTGAGACGTTGGATTTGACTCT
CGTGGTGGATAACTCGGTATTGGAGATCTATGCCAATGGTCGGTTTGCGT
TGAGTACTTGGGTTCGGTGAGTATCTTCCTATTTTATCAATGAAGTGTTT
ATGATGCTAACGTGGGGATAGTTCTTGGTACGCCAATTCCACGAACATCA
GTTTCTTCCAGAATGGCGTGGGTGGTGTTGCGTTCTCCAACGTGACCGTT
TCCGAGGGCTTGTATGATGCTTGGCCGGATCGTCAGTCTTAA back to topCoding sequence (CDS) from alignment at An08:2635794..2637735- >CBS51388_005815-T1 ID=CBS51388_005815-T1|Name=CBS51388_005815-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3774bp|location=Sequence derived from alignment at An08:2635794..2637735- (Aspergillus niger CBS 513.88)
TTCTTGGTACGCCAATTCCACGAACATCAGTTTCTTCCAGAATGGCGTGG
GTGGTGTTGCGTTCTCCAACGTGACCGTTTCCGAGGGCTTGTATGATGCT
TGGCCGGATCGTCAGTCTTAAATGAAGCTTCAAACGGCTTCCGTACTGCT
CGGCAGTGCTGCTGCTGCCTCGCCTTCCATGCAGACGCGGGCCTCCGTTG
TCATCGACTACAATGTCGCACCTCCAAACCTATCCACTCTGCCCAATGGC
TCCCTCTTCGAAACATGGCGTCCCCGCGCCCACGTCCTGCCCCCCAACGG
CCAGATCGGTGACCCCTGCCTGCATTACACCGATCCCTCCACGGGCCTCT
TCCACGTCGGCTTCCTTCACGATGGCAGCGGCATCTCCAGCGCCACCACT
GATGATCTAGCCACCTACAAGGACCTCAACCAAGGCAACCAAGTCATTGT
TCCCGGGGGTATCAACGACCCCGTCGCCGTCTTCGATGGCTCCGTCATCC
CCAGCGGCATCAACGGCCTCCCCACTCTCCTCTACACCTCCGTCTCCTTC
CTTCCCATCCACTGGTCCATCCCCTACACCCGCGGCAGTGAGACCCAATC
CCTCGCTGTCTCCTCGGATGGCGGCAGCAACTTCACCAAGCTCGACCAGG
GCCCCGTCATCCCTGGCCCTCCCTTCGCCTACAACGTCACCGCATTCCGG
GACCCCTACGTCTTCCAAAACCCCACCCTCGACTCCCTCCTGCACAGCAA
GAACAACACCTGGTATACCGTCATCTCCGGTGGTCTGCACGGCAAGGGCC
CCGCCCAGTTCCTCTACCGCCAGTACGACCCGGACTTCCAGTACTGGGAG
TTCCTCGGCCAATGGTGGCACGAGCCCACCAACTCCACTTGGGGTAACGG
CACCTGGGCCGGCCGATGGGCCTTCAACTTCGAGACCGGCAACGTCTTCA
GTCTCGACGAGTACGGATACAACCCCCACGGCCAGATCTTCTCCACGATC
GGCACCGAGGGCTCTGACCAGCCCGTCGTGCCCCAGCTCACCAGCATCCA
CGACATGCTCTGGGTGTCCGGCAACGTCTCTCGCAATGGCTCTGTCTCGT
TCACCCCGAACATGGCGGGCTTCCTCGACTGGGGCTTCTCCTCTTACGCA
GCTGCCGGAAAGGTCCTCCCCTCGACTTCTCTGCCCTCGACGAAGAGCGG
CGCCCCGGACCGCTTCATCTCGTACGTCTGGCTGTCCGGTGACCTGTTCG
AACAGGCCGAAGGGTTCCCCACGAACCAGCAGAATTGGACCGGTACGCTG
TTGCTTCCGCGAGAGTTGCGCGTGCTGTATATCCCCAATGTGGTGGACAA
TGCTCTGGCTCGGGAATCTGGTGCCTCGTGGCAGGTCGTGAGCAGCGATA
GCAGTGCGGGCACCGTGGAGCTGCAGACACTGGGTATCTCCATTGCCCGG
GAAACCAAGGCCGCCTTGCTGTCGGGAACGTCGTTCACCGAGTCCGACCG
TACTCTGAACAGCAGTGGTGTTGTGCCGTTCAAGCGCTCCCCGTCCGAGA
AGTTCTTTGTTTTGTCCGCGCAGCTGTCCTTCCCTGCTTCGGCTAGGGGA
TCGGGACTCAAAAGTGGATTCCAGATCCTCTCGTCGGAGCTGGAAAGCAC
CACTGTCTACTACCAGTTCTCGAATGAGTCGATTATTGTCGACCGCAGTA
ACACCAGTGCTGCGGCGCGTACCACGGATGGTATCGATAGCAGTGCGGAG
GCTGGCAAGTTGCGCCTGTTTGACGTGTTGAATGGCGGAGAGCAGGCGAT
TGAGACGTTGGATTTGACTCTCGTGGTGGATAACTCGGTATTGGAGATCT
ATGCCAATGGTCGGTTTGCGTTGAGTACTTGGGTTCGTTCTTGGTACGCC
AATTCCACGAACATCAGTTTCTTCCAGAATGGCGTGGGTGGTGTTGCGTT
CTCCAACGTGACCGTTTCCGAGGGCTTGTATGATGCTTGGCCGGATCGTC
AGTCTTAAATGAAGCTTCAAACGGCTTCCGTACTGCTCGGCAGTGCTGCT
GCTGCCTCGCCTTCCATGCAGACGCGGGCCTCCGTTGTCATCGACTACAA
TGTCGCACCTCCAAACCTATCCACTCTGCCCAATGGCTCCCTCTTCGAAA
CATGGCGTCCCCGCGCCCACGTCCTGCCCCCCAACGGCCAGATCGGTGAC
CCCTGCCTGCATTACACCGATCCCTCCACGGGCCTCTTCCACGTCGGCTT
CCTTCACGATGGCAGCGGCATCTCCAGCGCCACCACTGATGATCTAGCCA
CCTACAAGGACCTCAACCAAGGCAACCAAGTCATTGTTCCCGGGGGTATC
AACGACCCCGTCGCCGTCTTCGATGGCTCCGTCATCCCCAGCGGCATCAA
CGGCCTCCCCACTCTCCTCTACACCTCCGTCTCCTTCCTTCCCATCCACT
GGTCCATCCCCTACACCCGCGGCAGTGAGACCCAATCCCTCGCTGTCTCC
TCGGATGGCGGCAGCAACTTCACCAAGCTCGACCAGGGCCCCGTCATCCC
TGGCCCTCCCTTCGCCTACAACGTCACCGCATTCCGGGACCCCTACGTCT
TCCAAAACCCCACCCTCGACTCCCTCCTGCACAGCAAGAACAACACCTGG
TATACCGTCATCTCCGGTGGTCTGCACGGCAAGGGCCCCGCCCAGTTCCT
CTACCGCCAGTACGACCCGGACTTCCAGTACTGGGAGTTCCTCGGCCAAT
GGTGGCACGAGCCCACCAACTCCACTTGGGGTAACGGCACCTGGGCCGGC
CGATGGGCCTTCAACTTCGAGACCGGCAACGTCTTCAGTCTCGACGAGTA
CGGATACAACCCCCACGGCCAGATCTTCTCCACGATCGGCACCGAGGGCT
CTGACCAGCCCGTCGTGCCCCAGCTCACCAGCATCCACGACATGCTCTGG
GTGTCCGGCAACGTCTCTCGCAATGGCTCTGTCTCGTTCACCCCGAACAT
GGCGGGCTTCCTCGACTGGGGCTTCTCCTCTTACGCAGCTGCCGGAAAGG
TCCTCCCCTCGACTTCTCTGCCCTCGACGAAGAGCGGCGCCCCGGACCGC
TTCATCTCGTACGTCTGGCTGTCCGGTGACCTGTTCGAACAGGCCGAAGG
GTTCCCCACGAACCAGCAGAATTGGACCGGTACGCTGTTGCTTCCGCGAG
AGTTGCGCGTGCTGTATATCCCCAATGTGGTGGACAATGCTCTGGCTCGG
GAATCTGGTGCCTCGTGGCAGGTCGTGAGCAGCGATAGCAGTGCGGGCAC
CGTGGAGCTGCAGACACTGGGTATCTCCATTGCCCGGGAAACCAAGGCCG
CCTTGCTGTCGGGAACGTCGTTCACCGAGTCCGACCGTACTCTGAACAGC
AGTGGTGTTGTGCCGTTCAAGCGCTCCCCGTCCGAGAAGTTCTTTGTTTT
GTCCGCGCAGCTGTCCTTCCCTGCTTCGGCTAGGGGATCGGGACTCAAAA
GTGGATTCCAGATCCTCTCGTCGGAGCTGGAAAGCACCACTGTCTACTAC
CAGTTCTCGAATGAGTCGATTATTGTCGACCGCAGTAACACCAGTGCTGC
GGCGCGTACCACGGATGGTATCGATAGCAGTGCGGAGGCTGGCAAGTTGC
GCCTGTTTGACGTGTTGAATGGCGGAGAGCAGGCGATTGAGACGTTGGAT
TTGACTCTCGTGGTGGATAACTCGGTATTGGAGATCTATGCCAATGGTCG
GTTTGCGTTGAGTACTTGGGTTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH32 |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR023296 |
| DBxref | InterPro:IPR013189 |
| DBxref | InterPro:IPR013148 |
| DBxref | InterPro:IPR001362 |
| DBxref | PFAM:PF00251 |
| DBxref | PFAM:PF08244 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2635794..2637735 - |
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