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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2663821..2664825- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005821-T1 ID=CBS51388_005821-T1|Name=CBS51388_005821-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1005bp|location=Sequence derived from alignment at An08:2663821..2664825- (Aspergillus niger CBS 513.88)
ATGCCTACTCCAGAGTCTCCATACTTTTTCCCAGTCCCTAGTGTAGTGTT
GGTGGGGATCTTCCATGGATACTTTGTAAGCAAAGCTCTTGAGACGGTCA
TGTTAACGATACATTGATGATGCAGTATCTCGCACACGTACTGTATTGTA
TTGAATACTAGTCGAAAGCCAGAGAAAAGCTGCAGGCCAGATGACAAGTA
ACTCACCGTAGTCCTAGTAATTGTCACTCCCGGTGAATATTCGTCAGAAG
CCAATTGTTTTCTGCTCCAGCATACCATGACATAATACTCGACTCGGGTA
CATGAGTAACAGTATAACTTCCATTCTTTTCCGCCCTTGCCAATACTGAC
CCCTACATTCAGTCTCTCCATTTTAATGAGCCTATTTCCTGAACCTCGAA
GTTCCTCAACCTCGGGTTCTACAAGTACCATGCAACACCTAAGAAGTGCG
ACTACGGCAATTATCTCTTCTGGGGAGTCCTTTGCTCGAGAACATACAAC
CGCACTAGCCTTTGGTAGTACGGGATTTGCCCTCGCTACGGCACCTATTG
CTGGCCCTGCAATATTAGGTGCTGCCGGTTTTGGCGCTACAGGGCCTGTT
GCGGCTTCATTTGCTGCAGTATGGCAATCTTCAATCGGGGCAGTTCAAGC
TGGGAGTCTGTTTGCCACATTACAAAGTGCTGCGATGGGAGGTGCTGCTG
CGGGAGCATTTACAACAGCTTCGAATATTGGTATCGCGATGGTGGGATCC
GTGGCGATCGGAACACAGTGGAATTATTACAAGGCAGTACCACGGATGGG
CTATGATGTCAAAAGTACTGGTAAAGCTGGATACTGTGGTACTATAGCTC
TGTCTCTCTGAACGCTGCTCAAGGCTAACTCAAATATAGATAGCGATCAG
CCAGATGATGGATTTGATCACAGGGCAAGTAACCCACAGTCTTGTGATAA
AATTAATTGTTTGGAAAAGGAATGGGCAAAATTGCTTCAGATAGACCTAT
CTTGA back to topCoding sequence (CDS) from alignment at An08:2663821..2664825- >CBS51388_005821-T1 ID=CBS51388_005821-T1|Name=CBS51388_005821-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2151bp|location=Sequence derived from alignment at An08:2663821..2664825- (Aspergillus niger CBS 513.88)
ATAGCGATCAGCCAGATGATGGATTTGATCACAGGGCAAGTAACCCACAG
TCTTGTGATAAAATTAATTGTTTGGAAAAGGAATGGGCAAAATTGCTTCA
GATAGACCTATCTTGATATAACTTCCATTCTTTTCCGCCCTTGCCAATAC
TGACCCCTACATTCAGTCTCTCCATTTTAATGAGCCTATTTCCTGAACCT
CGAAGTTCCTCAACCTCGGGTTCTACAAGTACCATGCAACACCTAAGAAG
TGCGACTACGGCAATTATCTCTTCTGGGGAGTCCTTTGCTCGAGAACATA
CAACCGCACTAGCCTTTGGTAGTACGGGATTTGCCCTCGCTACGGCACCT
ATTGCTGGCCCTGCAATATTAGGTGCTGCCGGTTTTGGCGCTACAGGGCC
TGTTGCGGCTTCATTTGCTGCAGTATGGCAATCTTCAATCGGGGCAGTTC
AAGCTGGGAGTCTGTTTGCCACATTACAAAGTGCTGCGATGGGAGGTGCT
GCTGCGGGAGCATTTACAACAGCTTCGAATATTGGTATCGCGATGGTGGG
ATCCGTGGCGATCGGAACACAGTGGAATTATTACAAGGCAGTACCACGGA
TGGGCTATGATGTCAAAAGTACTGGTAAAGCTGGATACTGTGATGCCTAC
TCCAGAGTCTCCATACTTTTTCCCAGTCCCTAGTGTAGTGTTGGTGGGGA
TCTTCCATGGATACTTTATAGCGATCAGCCAGATGATGGATTTGATCACA
GGGCAAGTAACCCACAGTCTTGTGATAAAATTAATTGTTTGGAAAAGGAA
TGGGCAAAATTGCTTCAGATAGACCTATCTTGATATAACTTCCATTCTTT
TCCGCCCTTGCCAATACTGACCCCTACATTCAGTCTCTCCATTTTAATGA
GCCTATTTCCTGAACCTCGAAGTTCCTCAACCTCGGGTTCTACAAGTACC
ATGCAACACCTAAGAAGTGCGACTACGGCAATTATCTCTTCTGGGGAGTC
CTTTGCTCGAGAACATACAACCGCACTAGCCTTTGGTAGTACGGGATTTG
CCCTCGCTACGGCACCTATTGCTGGCCCTGCAATATTAGGTGCTGCCGGT
TTTGGCGCTACAGGGCCTGTTGCGGCTTCATTTGCTGCAGTATGGCAATC
TTCAATCGGGGCAGTTCAAGCTGGGAGTCTGTTTGCCACATTACAAAGTG
CTGCGATGGGAGGTGCTGCTGCGGGAGCATTTACAACAGCTTCGAATATT
GGTATCGCGATGGTGGGATCCGTGGCGATCGGAACACAGTGGAATTATTA
CAAGGCAGTACCACGGATGGGCTATGATGTCAAAAGTACTGGTAAAGCTG
GATACTGTGATGCCTACTCCAGAGTCTCCATACTTTTTCCCAGTCCCTAG
TGTAGTGTTGGTGGGGATCTTCCATGGATACTTTATAGCGATCAGCCAGA
TGATGGATTTGATCACAGGGCAAGTAACCCACAGTCTTGTGATAAAATTA
ATTGTTTGGAAAAGGAATGGGCAAAATTGCTTCAGATAGACCTATCTTGA
TATAACTTCCATTCTTTTCCGCCCTTGCCAATACTGACCCCTACATTCAG
TCTCTCCATTTTAATGAGCCTATTTCCTGAACCTCGAAGTTCCTCAACCT
CGGGTTCTACAAGTACCATGCAACACCTAAGAAGTGCGACTACGGCAATT
ATCTCTTCTGGGGAGTCCTTTGCTCGAGAACATACAACCGCACTAGCCTT
TGGTAGTACGGGATTTGCCCTCGCTACGGCACCTATTGCTGGCCCTGCAA
TATTAGGTGCTGCCGGTTTTGGCGCTACAGGGCCTGTTGCGGCTTCATTT
GCTGCAGTATGGCAATCTTCAATCGGGGCAGTTCAAGCTGGGAGTCTGTT
TGCCACATTACAAAGTGCTGCGATGGGAGGTGCTGCTGCGGGAGCATTTA
CAACAGCTTCGAATATTGGTATCGCGATGGTGGGATCCGTGGCGATCGGA
ACACAGTGGAATTATTACAAGGCAGTACCACGGATGGGCTATGATGTCAA
AAGTACTGGTAAAGCTGGATACTGTGATGCCTACTCCAGAGTCTCCATAC
TTTTTCCCAGTCCCTAGTGTAGTGTTGGTGGGGATCTTCCATGGATACTT
T back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009311 |
| DBxref | PFAM:PF06140 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2663821..2664825 - |
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