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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2836729..2837619- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005862-T1 ID=CBS51388_005862-T1|Name=CBS51388_005862-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=891bp|location=Sequence derived from alignment at An08:2836729..2837619- (Aspergillus niger CBS 513.88)
ATGGGCCAAGAGAACTGCGACCATGATTTTATGCAGGATCCTTCTACACC
TGATGTATGCTCGCACTTAGCTGCCTGTGAAGACCATCGGGTAGCCGCTA
CACAGCTCTCTCGAGACAATGATGTCGACATTGATGCCGGACCGGGAAAT
ACTCCTCTTATGTGGGCAGCCTACAAGTGCCCTTGCGGTGCTGGTGCTGT
TAGCAAGCTGCTTGCGTCCGGAGCAGATGCTGCATCCCAAGACACCGACA
AGTTCCTCGCACTTCACATAGCAGCAGGGAAAGGATCTTTTCCAGTTGTG
GAGCTGCTCCTGCAACTTCCTGGAATCAATGTAAATGCGCAGGACAAACA
CGGGTCAACCGCTCTTCATGAAGCAGCATATAATGGACGTTTGCCAATTG
TCGAGCTGCTCCTGCAACATCGTGGCACCGATGTCAATAGAAAGGACAAT
TACGGGTGCACCGCGCTTCATGAAGCGTCAGATGAAGGACGTCTGCAAGT
TGTGGAGCTACTCCTGCGACGAGGTAGGGTTGATATCAATGCACAAGACA
ACGACGGTTGGTCCGCACTTCACATAGCGGCATGCAAAGGACATTTGGCA
ATGGTCAAGCTGCTCCTGCAACATCGTGGAATAAATGTCAATTTGAAGGA
CAATCACGGTCGGTCTGCTCTCTGGTTTGCAAAAGAGAAAAGAGACATGC
CGATATACTACTCTCTCGCTGGCGACCCCCGGCTGAACGACAACGAAATA
ATCAACCCGTTTGGCTCCCCACCGCATCAATGTCACACCTGCTCCGAAAT
GGAAGAGAAAACGACTGTCACGGCGATGCCGGTACTGTCCTTATTAGTTG
CCTTATTCGTTGCTGCCGTTTTGTGTCCCACGTGTGATTAA back to topCoding sequence (CDS) from alignment at An08:2836729..2837619- >CBS51388_005862-T1 ID=CBS51388_005862-T1|Name=CBS51388_005862-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=891bp|location=Sequence derived from alignment at An08:2836729..2837619- (Aspergillus niger CBS 513.88)
ATGGGCCAAGAGAACTGCGACCATGATTTTATGCAGGATCCTTCTACACC
TGATGTATGCTCGCACTTAGCTGCCTGTGAAGACCATCGGGTAGCCGCTA
CACAGCTCTCTCGAGACAATGATGTCGACATTGATGCCGGACCGGGAAAT
ACTCCTCTTATGTGGGCAGCCTACAAGTGCCCTTGCGGTGCTGGTGCTGT
TAGCAAGCTGCTTGCGTCCGGAGCAGATGCTGCATCCCAAGACACCGACA
AGTTCCTCGCACTTCACATAGCAGCAGGGAAAGGATCTTTTCCAGTTGTG
GAGCTGCTCCTGCAACTTCCTGGAATCAATGTAAATGCGCAGGACAAACA
CGGGTCAACCGCTCTTCATGAAGCAGCATATAATGGACGTTTGCCAATTG
TCGAGCTGCTCCTGCAACATCGTGGCACCGATGTCAATAGAAAGGACAAT
TACGGGTGCACCGCGCTTCATGAAGCGTCAGATGAAGGACGTCTGCAAGT
TGTGGAGCTACTCCTGCGACGAGGTAGGGTTGATATCAATGCACAAGACA
ACGACGGTTGGTCCGCACTTCACATAGCGGCATGCAAAGGACATTTGGCA
ATGGTCAAGCTGCTCCTGCAACATCGTGGAATAAATGTCAATTTGAAGGA
CAATCACGGTCGGTCTGCTCTCTGGTTTGCAAAAGAGAAAAGAGACATGC
CGATATACTACTCTCTCGCTGGCGACCCCCGGCTGAACGACAACGAAATA
ATCAACCCGTTTGGCTCCCCACCGCATCAATGTCACACCTGCTCCGAAAT
GGAAGAGAAAACGACTGTCACGGCGATGCCGGTACTGTCCTTATTAGTTG
CCTTATTCGTTGCTGCCGTTTTGTGTCCCACGTGTGATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2836729..2837619 - |
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