|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2912002..2913876- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005877-T1 ID=CBS51388_005877-T1|Name=CBS51388_005877-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1875bp|location=Sequence derived from alignment at An08:2912002..2913876- (Aspergillus niger CBS 513.88)
ATGCTGCTGCTGGACCTACCGGGTGAGCTCTTACTTTGTGTCATGGACCA
TCTGGAGCGGGCCAAGGACATCCATTCTCTGTGTCTCACCAATTCGCATG
TATATCGACAGCTGTTACCGGCGCTCTATCGCTTCAACATACGATTCCAA
AACAGCTCGGCGCTGCACTGGGCAGCGCGTTATGGTAAGCTGGAACTTAT
CCAGACGATGTGTGTTTACCGGGCCCGCGTCAATGTGTATCTCCATGGCT
ACACACCTCTTCATTTTGCCGCAATGTTCGGACAGGCACCCGTTGTGAGA
TGGCTGCTCTCGTACGACGGCATCGATGTCAACTGCCGCGGCGAGGGTCT
GGGCTTGACCCCGCTTGGTGTGGCGGTGCGGAAGAAGGATGTAGAGGTTG
TTCAGGTGTTGCTTTCAGACGCCCGTACGGATATCAACGCAGGAAGCAGG
GACAACAAGACACCGCTGCTGGACGCTATCAAGCATCGGCACCTTGTCAT
TCTGCGATTGCTTCTGGCCGATGCGAGAATTGAGATGCATCCTCAGAGCC
AGTCAGCCTCGCCATTGCTGTACGCCATGCGCAAAGGCTTCGGCAGCGGC
GGTCGCGCGCTCCTAGCGCATGGCGACATTGACATCTCAGCACGAGACTG
GAAGGACCGGACGGTTCTGCACTATGCTGTTCTGCACAACGACGACGGAC
TTGTGCAGCTCTTGCTTCAGAAGCAGGACCTTGATGTGAACGCGCAGGAT
TGGCTCGGTATGACCGCCCTGCATCGTGCCATCATCAAAGACAATAGACA
GATCGCCGCCATGCTCCTGACGCGCAGTGATCTTGATGTCTCGATTTCCG
GTGCCGATGGGCACTGGAAGATATACGAAGAAATGCCGCCATTATGTCTG
GCCGTTGCCCTCCGCAGGGACCACATTTGCCAGCTTCTCCTGGAAGCTCC
TACGAATGCCGATGTTCGCACGGCAAGCGGGAATTCCCCCTTACATCTAG
CCGCAAGCATGGCGGATCTTGATTTGCTCACGCTATTGCTCAACCAACCA
GACATCAAGCTAAACGGCCGGAACGACGACGGGTTCACAGCTCTGCATGA
AGCCACAACCCGCGGGTACCTGTCCGTTGCCAAGCTGCTCCTCGCTGCGC
CAGGGGTGGATGCAAATGTGGGAGATACATGCGGGCAGACCGCACTCTGG
TGGGCGACGAAGCGCTCTGACGAGATTCTGACAAAGCGACTGCTATGCGA
AGACGACCTCGATCTTAATGTTGTAGGCCGGGATGGATCAACATCCCTTC
ATCATGCGGTCCAGTACCGGAACCGAACCATAGCACGGCTACTTCTCTGC
GAGGAGAGACTGGATATCAATGTACCGGACATGACCGGTTGGACTCCACT
TGTGTGGGCCGTGCATCAAGCGGACATTGACATGGTCAGACTGTTGCTTG
CGAGAGACGATCTGCAGCTGGATCCAATCTTCGCCGGAAACGCATCGGCA
CTGGGCCTGGCAGCGGAACGAGGCCACACCAAGATTGTGAACTTATTCCT
CGAGCACCGGGATCGCTTGGACATTAATCTCCCAACCCAGGTAGGCGAGA
CCCCACTATGCCGGGCCGCAGCAGCCGGGCATCATGATGTCGTCGATCTC
CTCCTTCAAGATCCTCAGCTGGATGTCAACCGGGCGGACCTCATTGGACG
CAGTCCGCTGTGCTGGGCGGTGTATGCGGGACATTTAAACGTTGTGAGAC
GTTTGCTTCAGGACAGAAGAGTCGTGATTGAAGGGGATTACTTCCGGCGA
CCAGCACTGGCGGCCGCTCATGAGATGGGACATGCAGAAATTGCTGATCT
TCTTAAAGCATATAGACTCGGATGA back to topCoding sequence (CDS) from alignment at An08:2912002..2913876- >CBS51388_005877-T1 ID=CBS51388_005877-T1|Name=CBS51388_005877-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1875bp|location=Sequence derived from alignment at An08:2912002..2913876- (Aspergillus niger CBS 513.88)
ATGCTGCTGCTGGACCTACCGGGTGAGCTCTTACTTTGTGTCATGGACCA
TCTGGAGCGGGCCAAGGACATCCATTCTCTGTGTCTCACCAATTCGCATG
TATATCGACAGCTGTTACCGGCGCTCTATCGCTTCAACATACGATTCCAA
AACAGCTCGGCGCTGCACTGGGCAGCGCGTTATGGTAAGCTGGAACTTAT
CCAGACGATGTGTGTTTACCGGGCCCGCGTCAATGTGTATCTCCATGGCT
ACACACCTCTTCATTTTGCCGCAATGTTCGGACAGGCACCCGTTGTGAGA
TGGCTGCTCTCGTACGACGGCATCGATGTCAACTGCCGCGGCGAGGGTCT
GGGCTTGACCCCGCTTGGTGTGGCGGTGCGGAAGAAGGATGTAGAGGTTG
TTCAGGTGTTGCTTTCAGACGCCCGTACGGATATCAACGCAGGAAGCAGG
GACAACAAGACACCGCTGCTGGACGCTATCAAGCATCGGCACCTTGTCAT
TCTGCGATTGCTTCTGGCCGATGCGAGAATTGAGATGCATCCTCAGAGCC
AGTCAGCCTCGCCATTGCTGTACGCCATGCGCAAAGGCTTCGGCAGCGGC
GGTCGCGCGCTCCTAGCGCATGGCGACATTGACATCTCAGCACGAGACTG
GAAGGACCGGACGGTTCTGCACTATGCTGTTCTGCACAACGACGACGGAC
TTGTGCAGCTCTTGCTTCAGAAGCAGGACCTTGATGTGAACGCGCAGGAT
TGGCTCGGTATGACCGCCCTGCATCGTGCCATCATCAAAGACAATAGACA
GATCGCCGCCATGCTCCTGACGCGCAGTGATCTTGATGTCTCGATTTCCG
GTGCCGATGGGCACTGGAAGATATACGAAGAAATGCCGCCATTATGTCTG
GCCGTTGCCCTCCGCAGGGACCACATTTGCCAGCTTCTCCTGGAAGCTCC
TACGAATGCCGATGTTCGCACGGCAAGCGGGAATTCCCCCTTACATCTAG
CCGCAAGCATGGCGGATCTTGATTTGCTCACGCTATTGCTCAACCAACCA
GACATCAAGCTAAACGGCCGGAACGACGACGGGTTCACAGCTCTGCATGA
AGCCACAACCCGCGGGTACCTGTCCGTTGCCAAGCTGCTCCTCGCTGCGC
CAGGGGTGGATGCAAATGTGGGAGATACATGCGGGCAGACCGCACTCTGG
TGGGCGACGAAGCGCTCTGACGAGATTCTGACAAAGCGACTGCTATGCGA
AGACGACCTCGATCTTAATGTTGTAGGCCGGGATGGATCAACATCCCTTC
ATCATGCGGTCCAGTACCGGAACCGAACCATAGCACGGCTACTTCTCTGC
GAGGAGAGACTGGATATCAATGTACCGGACATGACCGGTTGGACTCCACT
TGTGTGGGCCGTGCATCAAGCGGACATTGACATGGTCAGACTGTTGCTTG
CGAGAGACGATCTGCAGCTGGATCCAATCTTCGCCGGAAACGCATCGGCA
CTGGGCCTGGCAGCGGAACGAGGCCACACCAAGATTGTGAACTTATTCCT
CGAGCACCGGGATCGCTTGGACATTAATCTCCCAACCCAGGTAGGCGAGA
CCCCACTATGCCGGGCCGCAGCAGCCGGGCATCATGATGTCGTCGATCTC
CTCCTTCAAGATCCTCAGCTGGATGTCAACCGGGCGGACCTCATTGGACG
CAGTCCGCTGTGCTGGGCGGTGTATGCGGGACATTTAAACGTTGTGAGAC
GTTTGCTTCAGGACAGAAGAGTCGTGATTGAAGGGGATTACTTCCGGCGA
CCAGCACTGGCGGCCGCTCATGAGATGGGACATGCAGAAATTGCTGATCT
TCTTAAAGCATATAGACTCGGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2912002..2913876 - |
|
