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CBS51388_005888-T1, CBS51388_005888-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005888-T1
Unique NameCBS51388_005888-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:32490..34018+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005888-T1 ID=CBS51388_005888-T1|Name=CBS51388_005888-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1529bp|location=Sequence derived from alignment at An09:32490..34018+ (Aspergillus niger CBS 513.88)
ATGGCAGCAGATCAGAACGAGTCATCAACTGTTGATGCAGTCACTGAGAG
GCCTGCGCCACCGTATACGATCTTTGATAGATCTCAGAAGCGTCTGTTGG
CGGTGCTTGTTTCCGCTGCTGCTACATGTAAGTCACTGTCTATCCACATT
ATAATACTGCAGACACCTCTAATAATTCAGTCTCGACACTGGCGTCAAAC
ATTTATTTCCCTGCTATTCCATCCATATCCCGCAGTCTCAATGTCTCTAC
TGAGCTCGTCAACCTTTCCATTACCTCCTACCTTATCTTCCAGGGCCTAG
CGCCTAGCCTCTGGGGTCCAATCTCAGACGTCAAAGGTCGCCGAATAGCA
TACATCGGTACCCTATTTGTAGCAGTCTGTGCCTGCATTGGTCTCGCAGA
GACCAGGAATTATACTATGCTTATCATTTTTCGGTGCTTGCAAAGTACTG
GGTCTGCTAGTACTGTTGCTATCGGATCAGGTGTGATTGGCGATATTACG
ACCCGTGAAGATCGTGGGGGATTCATGGGTTTTTTTCAAGGAATGATGTT
GGTTTCCATTGCTATTGGGCCTGTTATCGGGGGAGCGCTTGCAGGGTCGA
TTGGATGGAGAACTATCTTTTGGTTTCTCACTGTTTACAGCGGGGTACTG
CTTACCATGATAGGTTTGTTGCTTCCTGAGACGTTGAGGTCAATCGTGGG
AAATGGTGGTCAACTTCCTTCCCCAAGGATCGGGCGTTATCCCCTTGCTC
TCTATCAGCGCTTCAGTAAAACGAATTGGCGTGAGACTGTGGAATATAAC
CGGCTGGCCCCCAAGAAACGAACCGAACTTTTAGGACCCCTCCGCATCTT
GATCAGCAAACAGGCCGCCCCGCTGGTACTTTTCTTTGCCATTTACTTCG
CTATGTGGCAAATGACGATTACGGCTATGGCAACTCTCTTCAAAGAACAC
TATGGATTGACAGAAATTCAGTCCGGATTAACCTTCATCGCTAATGGTGC
GGGCTCTATGTTCGGGACCCTCATCACAGGTAGGATCCTCGACAAGGATT
ATCGCCGGTTCAGAGAACAAGAACTTGCAGAAACATCACCCTCAAGACAG
GAGAAATTATTTCCACTTGAACGAGCCCGTCTTCGTCTGGTTCCCATCTT
CGCTGGCCTACAATGTTTATCAGTCATGATATTTGGCTGGACTGTTCAAT
ATTCGTCCCACGTCCACATCGCCGTTCCCATTATCTCAACGTTTATTACC
GGGTGGACAGCTGTGTCCAATCAATCGATAGTGACGACTTATTTAGTTGA
TGTATTCCATGATAGTAGTGCAGCTGCGAGCGCAAGTCTGAATATGGCCC
GTTGCTGTCTTGCGGCTGCGGGCTCGGGATTTGTGATGCCCATGGTGAAT
CGTGTTGGATGCGGAGTGGCTTTCACCGTATGTGTTGCAGCACAGATATT
TGCGAATACTGGCTTGTGGATACAGTGGAGGTATGGTGGTCTTTGGAGGA
GTGAGATGGAGAAGAAGTGGAGTCGGTGA
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Coding sequence (CDS) from alignment at An09:32490..34018+

>CBS51388_005888-T1 ID=CBS51388_005888-T1|Name=CBS51388_005888-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2952bp|location=Sequence derived from alignment at An09:32490..34018+ (Aspergillus niger CBS 513.88)
ATGGCAGCAGATCAGAACGAGTCATCAACTGTTGATGCAGTCACTGAGAG
GCCTGCGCCACCGTATACGATCTTTGATAGATCTCAGAAGCGTCTGTTGG
CGGTGCTTGTTTCCGCTGCTGCTACATTCTCGACACTGGCGTCAAACATT
TATTTCCCTGCTATTCCATCCATATCCCGCAGTCTCAATGTCTCTACTGA
GCTCGTCAACCTTTCCATTACCTCCTACCTTATCTTCCAGGGCCTAGCGC
CTAGCCTCTGGGGTCCAATCTCAGACGTCAAAGGTCGCCGAATAGCATAC
ATCGGTACCCTATTTGTAGCAGTCTGTGCCTGCATTGGTCTCGCAGAGAC
CAGGAATTATACTATGCTTATCATTTTTCGGTGCTTGCAAAGTACTGGGT
CTGCTAGTACTGTTGCTATCGGATCAGGTGTGATTGGCGATATTACGACC
CGTGAAGATCGTGGGGGATTCATGGGTTTTTTTCAAGGAATGATGTTGGT
TTCCATTGCTATTGGGCCTGTTATCGGGGGAGCGCTTGCAGGGTCGATTG
GATGGAGAACTATCTTTTGGTTTCTCACTGTTTACAGCGGGGTACTGCTT
ACCATGATAGGTTTGTTGCTTCCTGAGACGTTGAGGTCAATCGTGGGAAA
TGGTGGTCAACTTCCTTCCCCAAGGATCGGGCGTTATCCCCTTGCTCTCT
ATCAGCGCTTCAGTAAAACGAATTGGCGTGAGACTGTGGAATATAACCGG
CTGGCCCCCAAGAAACGAACCGAACTTTTAGGACCCCTCCGCATCTTGAT
CAGCAAACAGGCCGCCCCGCTGGTACTTTTCTTTGCCATTTACTTCGCTA
TGTGGCAAATGACGATTACGGCTATGGCAACTCTCTTCAAAGAACACTAT
GGATTGACAGAAATTCAGTCCGGATTAACCTTCATCGCTAATGGTGCGGG
CTCTATGTTCGGGACCCTCATCACAGGTAGGATCCTCGACAAGGATTATC
GCCGGTTCAGAGAACAAGAACTTGCAGAAACATCACCCTCAAGACAGGAG
AAATTATTTCCACTTGAACGAGCCCGTCTTCGTCTGGTTCCCATCTTCGC
TGGCCTACAATGTTTATCAGTCATGATATTTGGCTGGACTGTTCAATATT
CGTCCCACGTCCACATCGCCGTTCCCATTATCTCAACGTTTATTACCGGG
TGGACAGCTGTGTCCAATCAATCGATAGTGACGACTTATTTAGTTGATGT
ATTCCATGATAGTAGTGCAGCTGCGAGCGCAAGTCTGAATATGGCCCGTT
GCTGTCTTGCGGCTGCGGGCTCGGGATTTGTGATGCCCATGGTGAATCGT
GTTGGATGCGGAGTGGCTTTCACCGTATGTGTTGCAGCACAGATATTTGC
GAATACTGGCTTGTGGATACAGTGGAGGTATGGTGGTCTTTGGAGGAGTG
AGATGGAGAAGAAGTGGAGTCGGTGAATGGCAGCAGATCAGAACGAGTCA
TCAACTGTTGATGCAGTCACTGAGAGGCCTGCGCCACCGTATACGATCTT
TGATAGATCTCAGAAGCGTCTGTTGGCGGTGCTTGTTTCCGCTGCTGCTA
CATTCTCGACACTGGCGTCAAACATTTATTTCCCTGCTATTCCATCCATA
TCCCGCAGTCTCAATGTCTCTACTGAGCTCGTCAACCTTTCCATTACCTC
CTACCTTATCTTCCAGGGCCTAGCGCCTAGCCTCTGGGGTCCAATCTCAG
ACGTCAAAGGTCGCCGAATAGCATACATCGGTACCCTATTTGTAGCAGTC
TGTGCCTGCATTGGTCTCGCAGAGACCAGGAATTATACTATGCTTATCAT
TTTTCGGTGCTTGCAAAGTACTGGGTCTGCTAGTACTGTTGCTATCGGAT
CAGGTGTGATTGGCGATATTACGACCCGTGAAGATCGTGGGGGATTCATG
GGTTTTTTTCAAGGAATGATGTTGGTTTCCATTGCTATTGGGCCTGTTAT
CGGGGGAGCGCTTGCAGGGTCGATTGGATGGAGAACTATCTTTTGGTTTC
TCACTGTTTACAGCGGGGTACTGCTTACCATGATAGGTTTGTTGCTTCCT
GAGACGTTGAGGTCAATCGTGGGAAATGGTGGTCAACTTCCTTCCCCAAG
GATCGGGCGTTATCCCCTTGCTCTCTATCAGCGCTTCAGTAAAACGAATT
GGCGTGAGACTGTGGAATATAACCGGCTGGCCCCCAAGAAACGAACCGAA
CTTTTAGGACCCCTCCGCATCTTGATCAGCAAACAGGCCGCCCCGCTGGT
ACTTTTCTTTGCCATTTACTTCGCTATGTGGCAAATGACGATTACGGCTA
TGGCAACTCTCTTCAAAGAACACTATGGATTGACAGAAATTCAGTCCGGA
TTAACCTTCATCGCTAATGGTGCGGGCTCTATGTTCGGGACCCTCATCAC
AGGTAGGATCCTCGACAAGGATTATCGCCGGTTCAGAGAACAAGAACTTG
CAGAAACATCACCCTCAAGACAGGAGAAATTATTTCCACTTGAACGAGCC
CGTCTTCGTCTGGTTCCCATCTTCGCTGGCCTACAATGTTTATCAGTCAT
GATATTTGGCTGGACTGTTCAATATTCGTCCCACGTCCACATCGCCGTTC
CCATTATCTCAACGTTTATTACCGGGTGGACAGCTGTGTCCAATCAATCG
ATAGTGACGACTTATTTAGTTGATGTATTCCATGATAGTAGTGCAGCTGC
GAGCGCAAGTCTGAATATGGCCCGTTGCTGTCTTGCGGCTGCGGGCTCGG
GATTTGTGATGCCCATGGTGAATCGTGTTGGATGCGGAGTGGCTTTCACC
GTATGTGTTGCAGCACAGATATTTGCGAATACTGGCTTGTGGATACAGTG
GAGGTATGGTGGTCTTTGGAGGAGTGAGATGGAGAAGAAGTGGAGTCGGT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005888CBS51388_005888Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005888-T1.exon1CBS51388_005888-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005888-T1.exon2CBS51388_005888-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005888-T1.cdsCBS51388_005888-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005888-T1CBS51388_005888-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:32490..34018 +
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