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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:110344..111182+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005916-T1 ID=CBS51388_005916-T1|Name=CBS51388_005916-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=839bp|location=Sequence derived from alignment at An09:110344..111182+ (Aspergillus niger CBS 513.88)
ATGCGCGTTCTCGTGATTGGCGGAAGTGGACGGTGTGGCAAGCTGGTCAT
CGATGACCTGCTGAGTCGTGGTAAGTGTCTCTCGCATCAACCTGCATGTC
ATTGGTTGTATCGGCTAAATTGCTAACAATGAGATCCAGGCCACCAAGTT
ACGACGTTGGCCCGCAAGCCCGAATCTCTGGGTGGAGCTCGTGCCGGGCT
GAAGGTAGTCCAAGGTGAGTCTTAGTCGTCGTCTTAGTGCCTCTTAGTCC
TCGCAGTCCCTCTGGATATGCGCGAAGGAATATCGACTCCAGATTGACTA
ACAGAAATCCATCAGGAACCCCCACCGAACTCGAGGATGTCCGCGCCGCG
TTCCAAGCCGACATTCCCGATGTGGTAATTGTGACACTTAACGCCCCACG
GGCCAGCGACAGCCCCTTTGCGGCGCCCATCTCACCTCCTCGGCTAATGA
CCGACTGCAACTCCAACGTGCTGGCGGCGATGAAGGAGTTTGGGGTACGC
AAAACGGTCATCCTGCAGGCATTTGGGGTTGGGGAATCGTGGGACAACAT
GCACTGCGTGCTGCGGCTGCTGATGAAGAAGTCCAACATGTCGTATCAGT
ATGACGATCACAACGCGACGGCCAAGGCGGTGCAGGCGAGTGGACTGGAC
TATGTGATGGTGCGACCGTCGCGGCTGGTGGAGACGCCCGATGCCAACCA
GCCGGTCAAAGTGTGGCCGGATCATGGCAAGGGCGTGCCCATGATGGCCA
GTACCAGTCGCATTACAGTGGCCCGCTGGTTGGTGGACGCCGCGGAGAGC
AACAAATGGGATAACACGGCACCCGTGATCACCAACTAG back to topCoding sequence (CDS) from alignment at An09:110344..111182+ >CBS51388_005916-T1 ID=CBS51388_005916-T1|Name=CBS51388_005916-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2007bp|location=Sequence derived from alignment at An09:110344..111182+ (Aspergillus niger CBS 513.88)
ATGCGCGTTCTCGTGATTGGCGGAAGTGGACGGTGTGGCAAGCTGGTCAT
CGATGACCTGCTGAGTCGTGGCCACCAAGTTACGACGTTGGCCCGCAAGC
CCGAATCTCTGGGTGGAGCTCGTGCCGGGCTGAAGGTAGTCCAAGGAACC
CCCACCGAACTCGAGGATGTCCGCGCCGCGTTCCAAGCCGACATTCCCGA
TGTGGTAATTGTGACACTTAACGCCCCACGGGCCAGCGACAGCCCCTTTG
CGGCGCCCATCTCACCTCCTCGGCTAATGACCGACTGCAACTCCAACGTG
CTGGCGGCGATGAAGGAGTTTGGGGTACGCAAAACGGTCATCCTGCAGGC
ATTTGGGGTTGGGGAATCGTGGGACAACATGCACTGCGTGCTGCGGCTGC
TGATGAAGAAGTCCAACATGTCGTATCAGTATGACGATCACAACGCGACG
GCCAAGGCGGTGCAGGCGAGTGGACTGGACTATGTGATGGTGCGACCGTC
GCGGCTGGTGGAGACGCCCGATGCCAACCAGCCGGTCAAAGTGTGGCCGG
ATCATGGCAAGGGCGTGCCCATGATGGCCAGTACCAGTCGCATTACAGTG
GCCCGCTGGTTGGTGGACGCCGCGGAGAGCAACAAATGGGATAACACGGC
ACCCGTGATCACCAACTAGATGCGCGTTCTCGTGATTGGCGGAAGTGGAC
GGTGTGGCAAGCTGGTCATCGATGACCTGCTGAGTCGTGGCCACCAAGTT
ACGACGTTGGCCCGCAAGCCCGAATCTCTGGGTGGAGCTCGTGCCGGGCT
GAAGGTAGTCCAAGGAACCCCCACCGAACTCGAGGATGTCCGCGCCGCGT
TCCAAGCCGACATTCCCGATGTGGTAATTGTGACACTTAACGCCCCACGG
GCCAGCGACAGCCCCTTTGCGGCGCCCATCTCACCTCCTCGGCTAATGAC
CGACTGCAACTCCAACGTGCTGGCGGCGATGAAGGAGTTTGGGGTACGCA
AAACGGTCATCCTGCAGGCATTTGGGGTTGGGGAATCGTGGGACAACATG
CACTGCGTGCTGCGGCTGCTGATGAAGAAGTCCAACATGTCGTATCAGTA
TGACGATCACAACGCGACGGCCAAGGCGGTGCAGGCGAGTGGACTGGACT
ATGTGATGGTGCGACCGTCGCGGCTGGTGGAGACGCCCGATGCCAACCAG
CCGGTCAAAGTGTGGCCGGATCATGGCAAGGGCGTGCCCATGATGGCCAG
TACCAGTCGCATTACAGTGGCCCGCTGGTTGGTGGACGCCGCGGAGAGCA
ACAAATGGGATAACACGGCACCCGTGATCACCAACTAGATGCGCGTTCTC
GTGATTGGCGGAAGTGGACGGTGTGGCAAGCTGGTCATCGATGACCTGCT
GAGTCGTGGCCACCAAGTTACGACGTTGGCCCGCAAGCCCGAATCTCTGG
GTGGAGCTCGTGCCGGGCTGAAGGTAGTCCAAGGAACCCCCACCGAACTC
GAGGATGTCCGCGCCGCGTTCCAAGCCGACATTCCCGATGTGGTAATTGT
GACACTTAACGCCCCACGGGCCAGCGACAGCCCCTTTGCGGCGCCCATCT
CACCTCCTCGGCTAATGACCGACTGCAACTCCAACGTGCTGGCGGCGATG
AAGGAGTTTGGGGTACGCAAAACGGTCATCCTGCAGGCATTTGGGGTTGG
GGAATCGTGGGACAACATGCACTGCGTGCTGCGGCTGCTGATGAAGAAGT
CCAACATGTCGTATCAGTATGACGATCACAACGCGACGGCCAAGGCGGTG
CAGGCGAGTGGACTGGACTATGTGATGGTGCGACCGTCGCGGCTGGTGGA
GACGCCCGATGCCAACCAGCCGGTCAAAGTGTGGCCGGATCATGGCAAGG
GCGTGCCCATGATGGCCAGTACCAGTCGCATTACAGTGGCCCGCTGGTTG
GTGGACGCCGCGGAGAGCAACAAATGGGATAACACGGCACCCGTGATCAC
CAACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_9.1 |
| Note | SMCOG1199:NmrA family protein |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR016040 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:110344..111182 + |
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