You are here

Home

CBS51388_005931-T1, CBS51388_005931-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005931-T1
Unique NameCBS51388_005931-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:161883..162752+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005931-T1 ID=CBS51388_005931-T1|Name=CBS51388_005931-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=870bp|location=Sequence derived from alignment at An09:161883..162752+ (Aspergillus niger CBS 513.88)
ATGTTCAGAAACATTGTTACTGCAGCTCTCCTATCCTTTGCCCTTGCCAG
TGCCTCAACCGCGCACACAAATGGCCAAGCCCCCTGCGCAAAGGTGCACA
TGATGCTTGCCCGAGGAACTACCGAAAGCTACCCTGGCCTTCTGGGGTCT
TTGACTGAACTGGTCGTGGATGCTGTCCCGGACAGCGATTACGAAAATAT
CATCTATCCCGCCACTCAGGAAGGATCAACCCCCAGCTATGAGGAGGGAA
TTTACAATGGGACTACCCAGCTGAAGGCTTATGTGAAGGCTTGTCCGGAA
TCCAAGGTGGTTCTGTTCGGATATTCTCAGGTACCTCCCTTTTCTCGGAT
TTGTGTTTCTCACTTACTGACTCTCTGACAGGGAGCTATGGTTGTGAGCG
ACATGCTGGCTGGTGGCGGTGATAACGGAACTTTGGGAAATATCACCGCT
CCTGCTGTTGACCCTGAAACCGGATCGCACAGTAAATGACTGAATCTCAT
CTGTTTAAACCCAATCATATGCTAATATTCATCAGTTGCTGCTGTCCTTC
TCTACGGAGACCCCCGTCACATGCCCAACCAAACATACAACGTCGGAGAC
GTGACAGCTACTGGCGTAAGTCACATCCAGAACACTTTCAATGGACTGAA
GAAGTCAGTTAGTTGATATTGAATTTTTAAATAGAAATACCCACGCACTC
CCGAGCAACTTGCGGCCCTGTCGCAGTATGCCGATAGACTCCACGACTAC
TGCGACGACAAGGATGGCGTTTGCGATGCTGCCGGAACAAACCTCTCCGC
TCACCTGGCTTATGCCACTATTTGGGACAAGGTCGCTGCTACTTGGGTTG
AGAGCATGATGCAAAAATAA
back to top

Coding sequence (CDS) from alignment at An09:161883..162752+

>CBS51388_005931-T1 ID=CBS51388_005931-T1|Name=CBS51388_005931-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2784bp|location=Sequence derived from alignment at An09:161883..162752+ (Aspergillus niger CBS 513.88)
ATGTTCAGAAACATTGTTACTGCAGCTCTCCTATCCTTTGCCCTTGCCAG
TGCCTCAACCGCGCACACAAATGGCCAAGCCCCCTGCGCAAAGGTGCACA
TGATGCTTGCCCGAGGAACTACCGAAAGCTACCCTGGCCTTCTGGGGTCT
TTGACTGAACTGGTCGTGGATGCTGTCCCGGACAGCGATTACGAAAATAT
CATCTATCCCGCCACTCAGGAAGGATCAACCCCCAGCTATGAGGAGGGAA
TTTACAATGGGACTACCCAGCTGAAGGCTTATGTGAAGGCTTGTCCGGAA
TCCAAGGTGGTTCTGTTCGGATATTCTCAGGGAGCTATGGTTGTGAGCGA
CATGCTGGCTGGTGGCGGTGATAACGGAACTTTGGGAAATATCACCGCTC
CTGCTGTTGACCCTGAAACCGGATCGCACATTGCTGCTGTCCTTCTCTAC
GGAGACCCCCGTCACATGCCCAACCAAACATACAACGTCGGAGACGTGAC
AGCTACTGGCAAATACCCACGCACTCCCGAGCAACTTGCGGCCCTGTCGC
AGTATGCCGATAGACTCCACGACTACTGCGACGACAAGGATGGCGTTTGC
GATGCTGCCGGAACAAACCTCTCCGCTCACCTGGCTTATGCCACTATTTG
GGACAAGGTCGCTGCTACTTGGGTTGAGAGCATGATGCAAAAATAAATGT
TCAGAAACATTGTTACTGCAGCTCTCCTATCCTTTGCCCTTGCCAGTGCC
TCAACCGCGCACACAAATGGCCAAGCCCCCTGCGCAAAGGTGCACATGAT
GCTTGCCCGAGGAACTACCGAAAGCTACCCTGGCCTTCTGGGGTCTTTGA
CTGAACTGGTCGTGGATGCTGTCCCGGACAGCGATTACGAAAATATCATC
TATCCCGCCACTCAGGAAGGATCAACCCCCAGCTATGAGGAGGGAATTTA
CAATGGGACTACCCAGCTGAAGGCTTATGTGAAGGCTTGTCCGGAATCCA
AGGTGGTTCTGTTCGGATATTCTCAGGGAGCTATGGTTGTGAGCGACATG
CTGGCTGGTGGCGGTGATAACGGAACTTTGGGAAATATCACCGCTCCTGC
TGTTGACCCTGAAACCGGATCGCACATTGCTGCTGTCCTTCTCTACGGAG
ACCCCCGTCACATGCCCAACCAAACATACAACGTCGGAGACGTGACAGCT
ACTGGCAAATACCCACGCACTCCCGAGCAACTTGCGGCCCTGTCGCAGTA
TGCCGATAGACTCCACGACTACTGCGACGACAAGGATGGCGTTTGCGATG
CTGCCGGAACAAACCTCTCCGCTCACCTGGCTTATGCCACTATTTGGGAC
AAGGTCGCTGCTACTTGGGTTGAGAGCATGATGCAAAAATAAATGTTCAG
AAACATTGTTACTGCAGCTCTCCTATCCTTTGCCCTTGCCAGTGCCTCAA
CCGCGCACACAAATGGCCAAGCCCCCTGCGCAAAGGTGCACATGATGCTT
GCCCGAGGAACTACCGAAAGCTACCCTGGCCTTCTGGGGTCTTTGACTGA
ACTGGTCGTGGATGCTGTCCCGGACAGCGATTACGAAAATATCATCTATC
CCGCCACTCAGGAAGGATCAACCCCCAGCTATGAGGAGGGAATTTACAAT
GGGACTACCCAGCTGAAGGCTTATGTGAAGGCTTGTCCGGAATCCAAGGT
GGTTCTGTTCGGATATTCTCAGGGAGCTATGGTTGTGAGCGACATGCTGG
CTGGTGGCGGTGATAACGGAACTTTGGGAAATATCACCGCTCCTGCTGTT
GACCCTGAAACCGGATCGCACATTGCTGCTGTCCTTCTCTACGGAGACCC
CCGTCACATGCCCAACCAAACATACAACGTCGGAGACGTGACAGCTACTG
GCAAATACCCACGCACTCCCGAGCAACTTGCGGCCCTGTCGCAGTATGCC
GATAGACTCCACGACTACTGCGACGACAAGGATGGCGTTTGCGATGCTGC
CGGAACAAACCTCTCCGCTCACCTGGCTTATGCCACTATTTGGGACAAGG
TCGCTGCTACTTGGGTTGAGAGCATGATGCAAAAATAAATGTTCAGAAAC
ATTGTTACTGCAGCTCTCCTATCCTTTGCCCTTGCCAGTGCCTCAACCGC
GCACACAAATGGCCAAGCCCCCTGCGCAAAGGTGCACATGATGCTTGCCC
GAGGAACTACCGAAAGCTACCCTGGCCTTCTGGGGTCTTTGACTGAACTG
GTCGTGGATGCTGTCCCGGACAGCGATTACGAAAATATCATCTATCCCGC
CACTCAGGAAGGATCAACCCCCAGCTATGAGGAGGGAATTTACAATGGGA
CTACCCAGCTGAAGGCTTATGTGAAGGCTTGTCCGGAATCCAAGGTGGTT
CTGTTCGGATATTCTCAGGGAGCTATGGTTGTGAGCGACATGCTGGCTGG
TGGCGGTGATAACGGAACTTTGGGAAATATCACCGCTCCTGCTGTTGACC
CTGAAACCGGATCGCACATTGCTGCTGTCCTTCTCTACGGAGACCCCCGT
CACATGCCCAACCAAACATACAACGTCGGAGACGTGACAGCTACTGGCAA
ATACCCACGCACTCCCGAGCAACTTGCGGCCCTGTCGCAGTATGCCGATA
GACTCCACGACTACTGCGACGACAAGGATGGCGTTTGCGATGCTGCCGGA
ACAAACCTCTCCGCTCACCTGGCTTATGCCACTATTTGGGACAAGGTCGC
TGCTACTTGGGTTGAGAGCATGATGCAAAAATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005931CBS51388_005931Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005931-T1.exon1CBS51388_005931-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005931-T1.exon2CBS51388_005931-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005931-T1.exon3CBS51388_005931-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_005931-T1.exon4CBS51388_005931-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005931-T1.cdsCBS51388_005931-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005931-T1CBS51388_005931-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:CE5
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR000675
DBxrefPFAM:PF01083
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:161883..162752 +
Powered by Drupal