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CBS51388_005932-T1, CBS51388_005932-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005932-T1
Unique NameCBS51388_005932-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:163482..164792-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005932-T1 ID=CBS51388_005932-T1|Name=CBS51388_005932-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1311bp|location=Sequence derived from alignment at An09:163482..164792- (Aspergillus niger CBS 513.88)
ATGAGCTTCTCTTGTATACCTATCGGTGAAACCTTGGTTTCCGAGGCCGC
GAGAATAGTTCAGTTACTGGGATACAACGCCGCATACGTACAAACGGAGG
ATGAAAGATCATGCCACAGAGCCTTCTGGGTTATATATTGGCTGGAAAAG
GTCACCTCGTTTTTCCGAGGGCGTGGTTCGGTAAGGGTAACTACATCTTC
ATGTGTGGCATGGCTAATCAGAAATTTAGATGATACCCGATTATGACATA
GGCTGTCCCGTTCCGGAACCCCCCGATACTGTCCCTGGACAGCTTGATTG
GCTATTAACGACAGCACGCCTAGGTCGGCTGATGTCTCGCACTTACGAAT
GTCTCTTCTCCGTGAGTGCGGTTCAGATGCATACAGATGCCCGTATCGCA
GCGATAGACTCGATATCGCGCGAGCTAGAAGCGTGGAATTGCACCCTTCC
GGAACCCTATCAGCCCGGAACTCCAATTCGCTTCTCCAAAAGCAAGAACC
CCTGCGCGCAAGATATGGCGCTACAAATCAGATTTATATATTATGCATTG
GTTATGTCTATGTGTCGGCTTCGAATCCATCTTACGGTCGACCAACCCAG
TGAGACGAACCAAGAGACCAAGCGTCAACTGATGGAGGCCGCCCGAGCCG
TTATATACCATACACGGTATATTGAGCATGAAGCGCATGTCCCAGTCTGG
TAAGAGGTCCCATCCGGGGCCATGTTCCCACCGACACTAATCGTAACAGG
CAACTCGGTATCGTGCCCATCTCGGCTCTTTTTGTTATCTTTGACTTTGT
TATCCACAACCCGCTCCACAAGGAGACGGCCACCAATATCTCGTTCCTGG
ACATAGCAGCCGGTTATTTCAGCCGCTGGGAGATCAGTAACAAAGATTCT
CTTCCGGCATCAAGTGCCGCTGAATTTTCTCACATTGCCCGTCAATTTGT
GCGGGATGTACAAGCCAGGTCACAGACCATGGGCTCGCGACGGACTTCGC
GCCTCGAGTCAGATAATATTGGGCCAATGACTGGCGGAAAGAACGACTCG
TCCGGTTTTCCTATGCAGCCAAGTCACGTTATGGTAGGTTCCAGTTATGC
ACCCCCTTTCATATCACTTGCTGATATTGCTCCTGTAAAGAATGAGGAAC
CCCTCGTTCTTCCGGACATTGAAGGTTCATCGGCCATTGGCCCAGACCAA
CTATTCTATCCTGAAGATCCACTTCAAACCTTATTAGGGACCTACTTGCC
GCCGACGACCGACTTATCTAATATGTTCAACTCTGCTTTGTGGTATCCGG
GATCACTGTAA
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Coding sequence (CDS) from alignment at An09:163482..164792-

>CBS51388_005932-T1 ID=CBS51388_005932-T1|Name=CBS51388_005932-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3636bp|location=Sequence derived from alignment at An09:163482..164792- (Aspergillus niger CBS 513.88)
GCAACTCGGTATCGTGCCCATCTCGGCTCTTTTTGTTATCTTTGACTTTG
TTATCCACAACCCGCTCCACAAGGAGACGGCCACCAATATCTCGTTCCTG
GACATAGCAGCCGGTTATTTCAGCCGCTGGGAGATCAGTAACAAAGATTC
TCTTCCGGCATCAAGTGCCGCTGAATTTTCTCACATTGCCCGTCAATTTG
TGCGGGATGTACAAGCCAGGTCACAGACCATGGGCTCGCGACGGACTTCG
CGCCTCGAGTCAGATAATATTGGGCCAATGACTGGCGGAAAGAACGACTC
GTCCGGTTTTCCTATGCAGCCAAGTCACGTTATGGTAGGTTCCAGTTATG
CACCCCCTTTCATATCACTTGCTGATATTGCTCCTGTAAAGAATGAGGAA
CCCCTCGTTCTTCCGGACATTGAAGGTTCATCGGCCATTGGCCCAGACCA
ACTATTCTATCCTGAAGATCCACTTCAAACCTTATTAGGGACCTACTTGC
CGCCGACGACCGACTTATCTAATATGTTCAACTCTGCTTTGTGGTATCCG
GGATCACTGTAAATGATACCCGATTATGACATAGGCTGTCCCGTTCCGGA
ACCCCCCGATACTGTCCCTGGACAGCTTGATTGGCTATTAACGACAGCAC
GCCTAGGTCGGCTGATGTCTCGCACTTACGAATGTCTCTTCTCCGTGAGT
GCGGTTCAGATGCATACAGATGCCCGTATCGCAGCGATAGACTCGATATC
GCGCGAGCTAGAAGCGTGGAATTGCACCCTTCCGGAACCCTATCAGCCCG
GAACTCCAATTCGCTTCTCCAAAAGCAAGAACCCCTGCGCGCAAGATATG
GCGCTACAAATCAGATTTATATATTATGCATTGGTTATGTCTATGTGTCG
GCTTCGAATCCATCTTACGGTCGACCAACCCAGTGAGACGAACCAAGAGA
CCAAGCGTCAACTGATGGAGGCCGCCCGAGCCGTTATATACCATACACGG
TATATTGAGCATGAAGCGCATGTCCCAGTCTGATGAGCTTCTCTTGTATA
CCTATCGGTGAAACCTTGGTTTCCGAGGCCGCGAGAATAGTTCAGTTACT
GGGATACAACGCCGCATACGTACAAACGGAGGATGAAAGATCATGCCACA
GAGCCTTCTGGGTTATATATTGGCTGGAAAAGGTCACCTCGTTTTTCCGA
GGGCGTGGTTCGGCAACTCGGTATCGTGCCCATCTCGGCTCTTTTTGTTA
TCTTTGACTTTGTTATCCACAACCCGCTCCACAAGGAGACGGCCACCAAT
ATCTCGTTCCTGGACATAGCAGCCGGTTATTTCAGCCGCTGGGAGATCAG
TAACAAAGATTCTCTTCCGGCATCAAGTGCCGCTGAATTTTCTCACATTG
CCCGTCAATTTGTGCGGGATGTACAAGCCAGGTCACAGACCATGGGCTCG
CGACGGACTTCGCGCCTCGAGTCAGATAATATTGGGCCAATGACTGGCGG
AAAGAACGACTCGTCCGGTTTTCCTATGCAGCCAAGTCACGTTATGGTAG
GTTCCAGTTATGCACCCCCTTTCATATCACTTGCTGATATTGCTCCTGTA
AAGAATGAGGAACCCCTCGTTCTTCCGGACATTGAAGGTTCATCGGCCAT
TGGCCCAGACCAACTATTCTATCCTGAAGATCCACTTCAAACCTTATTAG
GGACCTACTTGCCGCCGACGACCGACTTATCTAATATGTTCAACTCTGCT
TTGTGGTATCCGGGATCACTGTAAATGATACCCGATTATGACATAGGCTG
TCCCGTTCCGGAACCCCCCGATACTGTCCCTGGACAGCTTGATTGGCTAT
TAACGACAGCACGCCTAGGTCGGCTGATGTCTCGCACTTACGAATGTCTC
TTCTCCGTGAGTGCGGTTCAGATGCATACAGATGCCCGTATCGCAGCGAT
AGACTCGATATCGCGCGAGCTAGAAGCGTGGAATTGCACCCTTCCGGAAC
CCTATCAGCCCGGAACTCCAATTCGCTTCTCCAAAAGCAAGAACCCCTGC
GCGCAAGATATGGCGCTACAAATCAGATTTATATATTATGCATTGGTTAT
GTCTATGTGTCGGCTTCGAATCCATCTTACGGTCGACCAACCCAGTGAGA
CGAACCAAGAGACCAAGCGTCAACTGATGGAGGCCGCCCGAGCCGTTATA
TACCATACACGGTATATTGAGCATGAAGCGCATGTCCCAGTCTGATGAGC
TTCTCTTGTATACCTATCGGTGAAACCTTGGTTTCCGAGGCCGCGAGAAT
AGTTCAGTTACTGGGATACAACGCCGCATACGTACAAACGGAGGATGAAA
GATCATGCCACAGAGCCTTCTGGGTTATATATTGGCTGGAAAAGGTCACC
TCGTTTTTCCGAGGGCGTGGTTCGGCAACTCGGTATCGTGCCCATCTCGG
CTCTTTTTGTTATCTTTGACTTTGTTATCCACAACCCGCTCCACAAGGAG
ACGGCCACCAATATCTCGTTCCTGGACATAGCAGCCGGTTATTTCAGCCG
CTGGGAGATCAGTAACAAAGATTCTCTTCCGGCATCAAGTGCCGCTGAAT
TTTCTCACATTGCCCGTCAATTTGTGCGGGATGTACAAGCCAGGTCACAG
ACCATGGGCTCGCGACGGACTTCGCGCCTCGAGTCAGATAATATTGGGCC
AATGACTGGCGGAAAGAACGACTCGTCCGGTTTTCCTATGCAGCCAAGTC
ACGTTATGGTAGGTTCCAGTTATGCACCCCCTTTCATATCACTTGCTGAT
ATTGCTCCTGTAAAGAATGAGGAACCCCTCGTTCTTCCGGACATTGAAGG
TTCATCGGCCATTGGCCCAGACCAACTATTCTATCCTGAAGATCCACTTC
AAACCTTATTAGGGACCTACTTGCCGCCGACGACCGACTTATCTAATATG
TTCAACTCTGCTTTGTGGTATCCGGGATCACTGTAAATGATACCCGATTA
TGACATAGGCTGTCCCGTTCCGGAACCCCCCGATACTGTCCCTGGACAGC
TTGATTGGCTATTAACGACAGCACGCCTAGGTCGGCTGATGTCTCGCACT
TACGAATGTCTCTTCTCCGTGAGTGCGGTTCAGATGCATACAGATGCCCG
TATCGCAGCGATAGACTCGATATCGCGCGAGCTAGAAGCGTGGAATTGCA
CCCTTCCGGAACCCTATCAGCCCGGAACTCCAATTCGCTTCTCCAAAAGC
AAGAACCCCTGCGCGCAAGATATGGCGCTACAAATCAGATTTATATATTA
TGCATTGGTTATGTCTATGTGTCGGCTTCGAATCCATCTTACGGTCGACC
AACCCAGTGAGACGAACCAAGAGACCAAGCGTCAACTGATGGAGGCCGCC
CGAGCCGTTATATACCATACACGGTATATTGAGCATGAAGCGCATGTCCC
AGTCTGATGAGCTTCTCTTGTATACCTATCGGTGAAACCTTGGTTTCCGA
GGCCGCGAGAATAGTTCAGTTACTGGGATACAACGCCGCATACGTACAAA
CGGAGGATGAAAGATCATGCCACAGAGCCTTCTGGGTTATATATTGGCTG
GAAAAGGTCACCTCGTTTTTCCGAGGGCGTGGTTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005932CBS51388_005932Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005932-T1CBS51388_005932-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005932-T1.cdsCBS51388_005932-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005932-T1.exon3CBS51388_005932-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_005932-T1.exon2CBS51388_005932-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005932-T1.exon1CBS51388_005932-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR007219
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:163482..164792 -
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