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CBS51388_005935-T1, CBS51388_005935-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005935-T1
Unique NameCBS51388_005935-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:170670..171709+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005935-T1 ID=CBS51388_005935-T1|Name=CBS51388_005935-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1040bp|location=Sequence derived from alignment at An09:170670..171709+ (Aspergillus niger CBS 513.88)
ATGTCTTCGACCGCAGACCACTTGTCAGCAGCATCCACAAAGGCCATTGC ACCGTATGTGAACCTCAGGCTTCCCATATCTTGAAGCGGTAATGACTCCT ACCTGAGGGTAGACGCTCAAAATCACAGACAGTTCAGGTCGAATTCGGAG GTCAAAAGGTCGATGTACCCAAAGGAGGTTACTATGACCGCTACCGTATG AACCCGAACCTGGATGAGGTAGCTCAGGACCCGAACATCGGACACGATAT CGCATTTCTCCGGAAAATCCCCAAGAAGCTGGTCGATTCGAGGGTCGGTC AAGTATATGCACCCAATTTCTATTATCGCACTAGCAGCGTCCAGCTCGTC ATCCTCGCGCCTCTTGACCAATTAAAGTCTAAGCTCCCTGCGCCGTTGGA GCCTCTTACAGCATTGCCGGGTTACGGCTTAGTTGCCTTGACATTTTATT CGTATCTGGTCTGCGACAATGATCCTTACAACGAGGTCTCTATCGCCATC ATCATTCGGCAGCCGGGTAACGCGAGTTATAGTCCCACACAACTGCTCAG CTCGATATGGAACCGAACTTTCTACGGTTATGTCTTGGCTCTTCCCGTCG ATACCGAGATTGCTCGGGTGAGGGGAATTTATGGATATCAACTCCCTAAA TGGCTTGCCAATATTAACCTGAAGATGGACAATCACGACATCAAGGCCGA CATCACCGCGACAGACGGAACACCCGATTTGACACTGGATGTACCACTTC CCGCGTTGAGGACCATTCCGTCAGGATCGCAAATTGGGACTAACAATGCA GTCAATAAGATTGACGGGAAATGGTATCAGGTGGCGGTTCAAACAAACCC CCTCTTGGCGACACAATGCCTTTTTCCTACCAACGTCAAGCTTACTCGGA ACGAAGGCCCATTGAGCCAACTACTCAACGAGCTGGGCGCTTCGACCATT GTACGTATGGATGTTATTAAGGACGCCCAGATGGTCTTGAATATGCCCAC CCCATTGAAGGTGTTCAACAGGGTCGGATCATTAGCTTAA
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Coding sequence (CDS) from alignment at An09:170670..171709+

>CBS51388_005935-T1 ID=CBS51388_005935-T1|Name=CBS51388_005935-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1962bp|location=Sequence derived from alignment at An09:170670..171709+ (Aspergillus niger CBS 513.88)
ATGTCTTCGACCGCAGACCACTTGTCAGCAGCATCCACAAAGGCCATTGC
ACCACGCTCAAAATCACAGACAGTTCAGGTCGAATTCGGAGGTCAAAAGG
TCGATGTACCCAAAGGAGGTTACTATGACCGCTACCGTATGAACCCGAAC
CTGGATGAGGTAGCTCAGGACCCGAACATCGGACACGATATCGCATTTCT
CCGGAAAATCCCCAAGAAGCTGGTCGATTCGAGGGTCGGTCAAGTATATG
CACCCAATTTCTATTATCGCACTAGCAGCGTCCAGCTCGTCATCCTCGCG
CCTCTTGACCAATTAAAGTCTAAGCTCCCTGCGCCGTTGGAGCCTCTTAC
AGCATTGCCGGGTTACGGCTTAGTTGCCTTGACATTTTATTCGTATCTGG
TCTGCGACAATGATCCTTACAACGAGGTCTCTATCGCCATCATCATTCGG
CAGCCGGGTAACGCGAGTTATAGTCCCACACAACTGCTCAGCTCGATATG
GAACCGAACTTTCTACGGTTATGTCTTGGCTCTTCCCGTCGATACCGAGA
TTGCTCGGGTGAGGGGAATTTATGGATATCAACTCCCTAAATGGCTTGCC
AATATTAACCTGAAGATGGACAATCACGACATCAAGGCCGACATCACCGC
GACAGACGGAACACCCGATTTGACACTGGATGTACCACTTCCCGCGTTGA
GGACCATTCCGTCAGGATCGCAAATTGGGACTAACAATGCAGTCAATAAG
ATTGACGGGAAATGGTATCAGGTGGCGGTTCAAACAAACCCCCTCTTGGC
GACACAATGCCTTTTTCCTACCAACGTCAAGCTTACTCGGAACGAAGGCC
CATTGAGCCAACTACTCAACGAGCTGGGCGCTTCGACCATTGTACGTATG
GATGTTATTAAGGACGCCCAGATGGTCTTGAATATGCCCACCCCATTGAA
GGTGTTCAACAGGGTCGGATCATTAGCTTAAATGTCTTCGACCGCAGACC
ACTTGTCAGCAGCATCCACAAAGGCCATTGCACCACGCTCAAAATCACAG
ACAGTTCAGGTCGAATTCGGAGGTCAAAAGGTCGATGTACCCAAAGGAGG
TTACTATGACCGCTACCGTATGAACCCGAACCTGGATGAGGTAGCTCAGG
ACCCGAACATCGGACACGATATCGCATTTCTCCGGAAAATCCCCAAGAAG
CTGGTCGATTCGAGGGTCGGTCAAGTATATGCACCCAATTTCTATTATCG
CACTAGCAGCGTCCAGCTCGTCATCCTCGCGCCTCTTGACCAATTAAAGT
CTAAGCTCCCTGCGCCGTTGGAGCCTCTTACAGCATTGCCGGGTTACGGC
TTAGTTGCCTTGACATTTTATTCGTATCTGGTCTGCGACAATGATCCTTA
CAACGAGGTCTCTATCGCCATCATCATTCGGCAGCCGGGTAACGCGAGTT
ATAGTCCCACACAACTGCTCAGCTCGATATGGAACCGAACTTTCTACGGT
TATGTCTTGGCTCTTCCCGTCGATACCGAGATTGCTCGGGTGAGGGGAAT
TTATGGATATCAACTCCCTAAATGGCTTGCCAATATTAACCTGAAGATGG
ACAATCACGACATCAAGGCCGACATCACCGCGACAGACGGAACACCCGAT
TTGACACTGGATGTACCACTTCCCGCGTTGAGGACCATTCCGTCAGGATC
GCAAATTGGGACTAACAATGCAGTCAATAAGATTGACGGGAAATGGTATC
AGGTGGCGGTTCAAACAAACCCCCTCTTGGCGACACAATGCCTTTTTCCT
ACCAACGTCAAGCTTACTCGGAACGAAGGCCCATTGAGCCAACTACTCAA
CGAGCTGGGCGCTTCGACCATTGTACGTATGGATGTTATTAAGGACGCCC
AGATGGTCTTGAATATGCCCACCCCATTGAAGGTGTTCAACAGGGTCGGA
TCATTAGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005935CBS51388_005935Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005935-T1.exon1CBS51388_005935-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005935-T1.exon2CBS51388_005935-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005935-T1.cdsCBS51388_005935-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005935-T1CBS51388_005935-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR022272
DBxrefInterPro:IPR023375
DBxrefInterPro:IPR010451
DBxrefPFAM:PF06314
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:170670..171709 +