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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:170670..171709+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005935-T1 ID=CBS51388_005935-T1|Name=CBS51388_005935-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1040bp|location=Sequence derived from alignment at An09:170670..171709+ (Aspergillus niger CBS 513.88)
ATGTCTTCGACCGCAGACCACTTGTCAGCAGCATCCACAAAGGCCATTGC
ACCGTATGTGAACCTCAGGCTTCCCATATCTTGAAGCGGTAATGACTCCT
ACCTGAGGGTAGACGCTCAAAATCACAGACAGTTCAGGTCGAATTCGGAG
GTCAAAAGGTCGATGTACCCAAAGGAGGTTACTATGACCGCTACCGTATG
AACCCGAACCTGGATGAGGTAGCTCAGGACCCGAACATCGGACACGATAT
CGCATTTCTCCGGAAAATCCCCAAGAAGCTGGTCGATTCGAGGGTCGGTC
AAGTATATGCACCCAATTTCTATTATCGCACTAGCAGCGTCCAGCTCGTC
ATCCTCGCGCCTCTTGACCAATTAAAGTCTAAGCTCCCTGCGCCGTTGGA
GCCTCTTACAGCATTGCCGGGTTACGGCTTAGTTGCCTTGACATTTTATT
CGTATCTGGTCTGCGACAATGATCCTTACAACGAGGTCTCTATCGCCATC
ATCATTCGGCAGCCGGGTAACGCGAGTTATAGTCCCACACAACTGCTCAG
CTCGATATGGAACCGAACTTTCTACGGTTATGTCTTGGCTCTTCCCGTCG
ATACCGAGATTGCTCGGGTGAGGGGAATTTATGGATATCAACTCCCTAAA
TGGCTTGCCAATATTAACCTGAAGATGGACAATCACGACATCAAGGCCGA
CATCACCGCGACAGACGGAACACCCGATTTGACACTGGATGTACCACTTC
CCGCGTTGAGGACCATTCCGTCAGGATCGCAAATTGGGACTAACAATGCA
GTCAATAAGATTGACGGGAAATGGTATCAGGTGGCGGTTCAAACAAACCC
CCTCTTGGCGACACAATGCCTTTTTCCTACCAACGTCAAGCTTACTCGGA
ACGAAGGCCCATTGAGCCAACTACTCAACGAGCTGGGCGCTTCGACCATT
GTACGTATGGATGTTATTAAGGACGCCCAGATGGTCTTGAATATGCCCAC
CCCATTGAAGGTGTTCAACAGGGTCGGATCATTAGCTTAA back to topCoding sequence (CDS) from alignment at An09:170670..171709+ >CBS51388_005935-T1 ID=CBS51388_005935-T1|Name=CBS51388_005935-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1962bp|location=Sequence derived from alignment at An09:170670..171709+ (Aspergillus niger CBS 513.88)
ATGTCTTCGACCGCAGACCACTTGTCAGCAGCATCCACAAAGGCCATTGC
ACCACGCTCAAAATCACAGACAGTTCAGGTCGAATTCGGAGGTCAAAAGG
TCGATGTACCCAAAGGAGGTTACTATGACCGCTACCGTATGAACCCGAAC
CTGGATGAGGTAGCTCAGGACCCGAACATCGGACACGATATCGCATTTCT
CCGGAAAATCCCCAAGAAGCTGGTCGATTCGAGGGTCGGTCAAGTATATG
CACCCAATTTCTATTATCGCACTAGCAGCGTCCAGCTCGTCATCCTCGCG
CCTCTTGACCAATTAAAGTCTAAGCTCCCTGCGCCGTTGGAGCCTCTTAC
AGCATTGCCGGGTTACGGCTTAGTTGCCTTGACATTTTATTCGTATCTGG
TCTGCGACAATGATCCTTACAACGAGGTCTCTATCGCCATCATCATTCGG
CAGCCGGGTAACGCGAGTTATAGTCCCACACAACTGCTCAGCTCGATATG
GAACCGAACTTTCTACGGTTATGTCTTGGCTCTTCCCGTCGATACCGAGA
TTGCTCGGGTGAGGGGAATTTATGGATATCAACTCCCTAAATGGCTTGCC
AATATTAACCTGAAGATGGACAATCACGACATCAAGGCCGACATCACCGC
GACAGACGGAACACCCGATTTGACACTGGATGTACCACTTCCCGCGTTGA
GGACCATTCCGTCAGGATCGCAAATTGGGACTAACAATGCAGTCAATAAG
ATTGACGGGAAATGGTATCAGGTGGCGGTTCAAACAAACCCCCTCTTGGC
GACACAATGCCTTTTTCCTACCAACGTCAAGCTTACTCGGAACGAAGGCC
CATTGAGCCAACTACTCAACGAGCTGGGCGCTTCGACCATTGTACGTATG
GATGTTATTAAGGACGCCCAGATGGTCTTGAATATGCCCACCCCATTGAA
GGTGTTCAACAGGGTCGGATCATTAGCTTAAATGTCTTCGACCGCAGACC
ACTTGTCAGCAGCATCCACAAAGGCCATTGCACCACGCTCAAAATCACAG
ACAGTTCAGGTCGAATTCGGAGGTCAAAAGGTCGATGTACCCAAAGGAGG
TTACTATGACCGCTACCGTATGAACCCGAACCTGGATGAGGTAGCTCAGG
ACCCGAACATCGGACACGATATCGCATTTCTCCGGAAAATCCCCAAGAAG
CTGGTCGATTCGAGGGTCGGTCAAGTATATGCACCCAATTTCTATTATCG
CACTAGCAGCGTCCAGCTCGTCATCCTCGCGCCTCTTGACCAATTAAAGT
CTAAGCTCCCTGCGCCGTTGGAGCCTCTTACAGCATTGCCGGGTTACGGC
TTAGTTGCCTTGACATTTTATTCGTATCTGGTCTGCGACAATGATCCTTA
CAACGAGGTCTCTATCGCCATCATCATTCGGCAGCCGGGTAACGCGAGTT
ATAGTCCCACACAACTGCTCAGCTCGATATGGAACCGAACTTTCTACGGT
TATGTCTTGGCTCTTCCCGTCGATACCGAGATTGCTCGGGTGAGGGGAAT
TTATGGATATCAACTCCCTAAATGGCTTGCCAATATTAACCTGAAGATGG
ACAATCACGACATCAAGGCCGACATCACCGCGACAGACGGAACACCCGAT
TTGACACTGGATGTACCACTTCCCGCGTTGAGGACCATTCCGTCAGGATC
GCAAATTGGGACTAACAATGCAGTCAATAAGATTGACGGGAAATGGTATC
AGGTGGCGGTTCAAACAAACCCCCTCTTGGCGACACAATGCCTTTTTCCT
ACCAACGTCAAGCTTACTCGGAACGAAGGCCCATTGAGCCAACTACTCAA
CGAGCTGGGCGCTTCGACCATTGTACGTATGGATGTTATTAAGGACGCCC
AGATGGTCTTGAATATGCCCACCCCATTGAAGGTGTTCAACAGGGTCGGA
TCATTAGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016829 | lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022272 |
| DBxref | InterPro:IPR023375 |
| DBxref | InterPro:IPR010451 |
| DBxref | PFAM:PF06314 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:170670..171709 + |
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