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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:185949..187541+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005940-T1 ID=CBS51388_005940-T1|Name=CBS51388_005940-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1593bp|location=Sequence derived from alignment at An09:185949..187541+ (Aspergillus niger CBS 513.88)
ATGGCTGGAGGGATGCTGAACTTCGGTCTGGTGCAGCTGTTTCCGCCTAC
GTACAAGTCGAGGTACGTTACATTAAGATTACCAATGTCATTCTAATCGG
TAACAGGTCAAATGGACTACGGAATGATGTTGCGACATTTCTGGAAAAGA
CAGCTCCCTCTTTTCTCCGATTCCCGGGTGGCAATAATCTGTAGGTAATC
ACCCTGAAAATGAAGATCCTCTAACAAGCGGATAGAGAAGGACTACAGAT
CGACAGCCGTTGGCAGTGGAACCTAACTGTTGGGCCCGTCGTTGATCGTC
CCGGGAGACAGGGTAGGGCACCACCACCGAGACCATGCATGACAAAGACT
AAATGATGCATAGGCGACTGGTTCTACCCAAACACCGACGCGCTCGGTAA
GTCTGCTGCATCCTTCTGCCCCACGAGCATGTGGTAACACACACAGGATT
GGACGAATATCTCTGGTGGTGCGAAGACATGAACATGGAGCCCGTCCTCG
CCGTCTGGGACGGCAAATCATACGGCGGCATTCTATCCGGCGACGATCTC
CAGCCATATATAGACGATATCATGAACGAGCTTGAGGTATACCTCCATGG
ATTAACTCTATCATGCCGAGCTGACCGTAAAGTACCTCCTCGGGCCGGTC
AACTCCACCTACGGGAGTATGCGAGCGCAAAACGGGCGCAGCAAACCATG
GTCCATAAACTACATCGAGATCGGGAACGAAGATGACTTTACCGGCGGAT
GCGACACATACCCAGACCGCTTCTATCAGATTTACAACGCCATCAGCAAC
AGCTACCCGAATATCACTCTCATCGCATCGAATATAGACTACCTGTGTCT
CCCGATTGAACCCCCACCCGGCCTGATATACGACTACCATTACTATCGCA
AACCGGATGACCTCGTCGCCATGTTCGACTACTGGGATAACCAGCCTCGC
ACGCAGCCCATCATGGTAGGGGAATATGGATGTCGGGATACCAGCGAGGC
AGACGGGATCTTCTGGTCCTCTATGCAATGTAGCTGCAGTGAGGCAGCGC
ATATGATTGGCCTGGAGAGGAACTCGGATGTAGTGAAAATGGCTGCGTAT
GCGCCACTATTGCAGCATTTCGGGTATACGCAGTGGTCGGTGAGTTTGGC
CTCCTTACCCCCATTCTTGTATGTCCATTATGTTAGAGCTAACAAGAACA
AAGCCAACGCTATTCGGCTTCGACTCTAGTCCTGACTCGCTGACTCCCTC
GACGTCATACTATGTTCAACGGATGTTTTCTACAAATCGCGGGGATACTA
TCCTCCCTGTGAATACAACTGCCACATTTGGACCGCTGTACTGGGTTGCA
TCCAGGACGAATAGCACGTATTTTGTGAAGTTGGCCAACTACGGCGCCCA
GAACCAGACTGTACGTGTAAAGGTGCCCCAAACCAAGACCGGGCATGTAG
AAATGCTGTATGGGCCGCAAAATGCGACCAATTTGGTGCATAATATTACT
GTTCAGCCGACGGTGAAGAATGTGACTAGCTCTAGGGGCATTTATTCCCT
GGATATGCCGCCGTGGGGGGTTGCTGTTTTGTCGGTGTGGTGA back to topCoding sequence (CDS) from alignment at An09:185949..187541+ >CBS51388_005940-T1 ID=CBS51388_005940-T1|Name=CBS51388_005940-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=9051bp|location=Sequence derived from alignment at An09:185949..187541+ (Aspergillus niger CBS 513.88)
ATGGCTGGAGGGATGCTGAACTTCGGTCTGGTGCAGCTGTTTCCGCCTAC
GTACAAGTCGAGGTCAAATGGACTACGGAATGATGTTGCGACATTTCTGG
AAAAGACAGCTCCCTCTTTTCTCCGATTCCCGGGTGGCAATAATCTAGAA
GGACTACAGATCGACAGCCGTTGGCAGTGGAACCTAACTGTTGGGCCCGT
CGTTGATCGTCCCGGGAGACAGGGCGACTGGTTCTACCCAAACACCGACG
CGCTCGGATTGGACGAATATCTCTGGTGGTGCGAAGACATGAACATGGAG
CCCGTCCTCGCCGTCTGGGACGGCAAATCATACGGCGGCATTCTATCCGG
CGACGATCTCCAGCCATATATAGACGATATCATGAACGAGCTTGAGTACC
TCCTCGGGCCGGTCAACTCCACCTACGGGAGTATGCGAGCGCAAAACGGG
CGCAGCAAACCATGGTCCATAAACTACATCGAGATCGGGAACGAAGATGA
CTTTACCGGCGGATGCGACACATACCCAGACCGCTTCTATCAGATTTACA
ACGCCATCAGCAACAGCTACCCGAATATCACTCTCATCGCATCGAATATA
GACTACCTGTGTCTCCCGATTGAACCCCCACCCGGCCTGATATACGACTA
CCATTACTATCGCAAACCGGATGACCTCGTCGCCATGTTCGACTACTGGG
ATAACCAGCCTCGCACGCAGCCCATCATGGTAGGGGAATATGGATGTCGG
GATACCAGCGAGGCAGACGGGATCTTCTGGTCCTCTATGCAATGTAGCTG
CAGTGAGGCAGCGCATATGATTGGCCTGGAGAGGAACTCGGATGTAGTGA
AAATGGCTGCGTATGCGCCACTATTGCAGCATTTCGGGTATACGCAGTGG
TCGCCAACGCTATTCGGCTTCGACTCTAGTCCTGACTCGCTGACTCCCTC
GACGTCATACTATGTTCAACGGATGTTTTCTACAAATCGCGGGGATACTA
TCCTCCCTGTGAATACAACTGCCACATTTGGACCGCTGTACTGGGTTGCA
TCCAGGACGAATAGCACGTATTTTGTGAAGTTGGCCAACTACGGCGCCCA
GAACCAGACTGTACGTGTAAAGGTGCCCCAAACCAAGACCGGGCATGTAG
AAATGCTGTATGGGCCGCAAAATGCGACCAATTTGGTGCATAATATTACT
GTTCAGCCGACGGTGAAGAATGTGACTAGCTCTAGGGGCATTTATTCCCT
GGATATGCCGCCGTGGGGGGTTGCTGTTTTGTCGGTGTGGTGAATGGCTG
GAGGGATGCTGAACTTCGGTCTGGTGCAGCTGTTTCCGCCTACGTACAAG
TCGAGGTCAAATGGACTACGGAATGATGTTGCGACATTTCTGGAAAAGAC
AGCTCCCTCTTTTCTCCGATTCCCGGGTGGCAATAATCTAGAAGGACTAC
AGATCGACAGCCGTTGGCAGTGGAACCTAACTGTTGGGCCCGTCGTTGAT
CGTCCCGGGAGACAGGGCGACTGGTTCTACCCAAACACCGACGCGCTCGG
ATTGGACGAATATCTCTGGTGGTGCGAAGACATGAACATGGAGCCCGTCC
TCGCCGTCTGGGACGGCAAATCATACGGCGGCATTCTATCCGGCGACGAT
CTCCAGCCATATATAGACGATATCATGAACGAGCTTGAGTACCTCCTCGG
GCCGGTCAACTCCACCTACGGGAGTATGCGAGCGCAAAACGGGCGCAGCA
AACCATGGTCCATAAACTACATCGAGATCGGGAACGAAGATGACTTTACC
GGCGGATGCGACACATACCCAGACCGCTTCTATCAGATTTACAACGCCAT
CAGCAACAGCTACCCGAATATCACTCTCATCGCATCGAATATAGACTACC
TGTGTCTCCCGATTGAACCCCCACCCGGCCTGATATACGACTACCATTAC
TATCGCAAACCGGATGACCTCGTCGCCATGTTCGACTACTGGGATAACCA
GCCTCGCACGCAGCCCATCATGGTAGGGGAATATGGATGTCGGGATACCA
GCGAGGCAGACGGGATCTTCTGGTCCTCTATGCAATGTAGCTGCAGTGAG
GCAGCGCATATGATTGGCCTGGAGAGGAACTCGGATGTAGTGAAAATGGC
TGCGTATGCGCCACTATTGCAGCATTTCGGGTATACGCAGTGGTCGCCAA
CGCTATTCGGCTTCGACTCTAGTCCTGACTCGCTGACTCCCTCGACGTCA
TACTATGTTCAACGGATGTTTTCTACAAATCGCGGGGATACTATCCTCCC
TGTGAATACAACTGCCACATTTGGACCGCTGTACTGGGTTGCATCCAGGA
CGAATAGCACGTATTTTGTGAAGTTGGCCAACTACGGCGCCCAGAACCAG
ACTGTACGTGTAAAGGTGCCCCAAACCAAGACCGGGCATGTAGAAATGCT
GTATGGGCCGCAAAATGCGACCAATTTGGTGCATAATATTACTGTTCAGC
CGACGGTGAAGAATGTGACTAGCTCTAGGGGCATTTATTCCCTGGATATG
CCGCCGTGGGGGGTTGCTGTTTTGTCGGTGTGGTGAATGGCTGGAGGGAT
GCTGAACTTCGGTCTGGTGCAGCTGTTTCCGCCTACGTACAAGTCGAGGT
CAAATGGACTACGGAATGATGTTGCGACATTTCTGGAAAAGACAGCTCCC
TCTTTTCTCCGATTCCCGGGTGGCAATAATCTAGAAGGACTACAGATCGA
CAGCCGTTGGCAGTGGAACCTAACTGTTGGGCCCGTCGTTGATCGTCCCG
GGAGACAGGGCGACTGGTTCTACCCAAACACCGACGCGCTCGGATTGGAC
GAATATCTCTGGTGGTGCGAAGACATGAACATGGAGCCCGTCCTCGCCGT
CTGGGACGGCAAATCATACGGCGGCATTCTATCCGGCGACGATCTCCAGC
CATATATAGACGATATCATGAACGAGCTTGAGTACCTCCTCGGGCCGGTC
AACTCCACCTACGGGAGTATGCGAGCGCAAAACGGGCGCAGCAAACCATG
GTCCATAAACTACATCGAGATCGGGAACGAAGATGACTTTACCGGCGGAT
GCGACACATACCCAGACCGCTTCTATCAGATTTACAACGCCATCAGCAAC
AGCTACCCGAATATCACTCTCATCGCATCGAATATAGACTACCTGTGTCT
CCCGATTGAACCCCCACCCGGCCTGATATACGACTACCATTACTATCGCA
AACCGGATGACCTCGTCGCCATGTTCGACTACTGGGATAACCAGCCTCGC
ACGCAGCCCATCATGGTAGGGGAATATGGATGTCGGGATACCAGCGAGGC
AGACGGGATCTTCTGGTCCTCTATGCAATGTAGCTGCAGTGAGGCAGCGC
ATATGATTGGCCTGGAGAGGAACTCGGATGTAGTGAAAATGGCTGCGTAT
GCGCCACTATTGCAGCATTTCGGGTATACGCAGTGGTCGCCAACGCTATT
CGGCTTCGACTCTAGTCCTGACTCGCTGACTCCCTCGACGTCATACTATG
TTCAACGGATGTTTTCTACAAATCGCGGGGATACTATCCTCCCTGTGAAT
ACAACTGCCACATTTGGACCGCTGTACTGGGTTGCATCCAGGACGAATAG
CACGTATTTTGTGAAGTTGGCCAACTACGGCGCCCAGAACCAGACTGTAC
GTGTAAAGGTGCCCCAAACCAAGACCGGGCATGTAGAAATGCTGTATGGG
CCGCAAAATGCGACCAATTTGGTGCATAATATTACTGTTCAGCCGACGGT
GAAGAATGTGACTAGCTCTAGGGGCATTTATTCCCTGGATATGCCGCCGT
GGGGGGTTGCTGTTTTGTCGGTGTGGTGAATGGCTGGAGGGATGCTGAAC
TTCGGTCTGGTGCAGCTGTTTCCGCCTACGTACAAGTCGAGGTCAAATGG
ACTACGGAATGATGTTGCGACATTTCTGGAAAAGACAGCTCCCTCTTTTC
TCCGATTCCCGGGTGGCAATAATCTAGAAGGACTACAGATCGACAGCCGT
TGGCAGTGGAACCTAACTGTTGGGCCCGTCGTTGATCGTCCCGGGAGACA
GGGCGACTGGTTCTACCCAAACACCGACGCGCTCGGATTGGACGAATATC
TCTGGTGGTGCGAAGACATGAACATGGAGCCCGTCCTCGCCGTCTGGGAC
GGCAAATCATACGGCGGCATTCTATCCGGCGACGATCTCCAGCCATATAT
AGACGATATCATGAACGAGCTTGAGTACCTCCTCGGGCCGGTCAACTCCA
CCTACGGGAGTATGCGAGCGCAAAACGGGCGCAGCAAACCATGGTCCATA
AACTACATCGAGATCGGGAACGAAGATGACTTTACCGGCGGATGCGACAC
ATACCCAGACCGCTTCTATCAGATTTACAACGCCATCAGCAACAGCTACC
CGAATATCACTCTCATCGCATCGAATATAGACTACCTGTGTCTCCCGATT
GAACCCCCACCCGGCCTGATATACGACTACCATTACTATCGCAAACCGGA
TGACCTCGTCGCCATGTTCGACTACTGGGATAACCAGCCTCGCACGCAGC
CCATCATGGTAGGGGAATATGGATGTCGGGATACCAGCGAGGCAGACGGG
ATCTTCTGGTCCTCTATGCAATGTAGCTGCAGTGAGGCAGCGCATATGAT
TGGCCTGGAGAGGAACTCGGATGTAGTGAAAATGGCTGCGTATGCGCCAC
TATTGCAGCATTTCGGGTATACGCAGTGGTCGCCAACGCTATTCGGCTTC
GACTCTAGTCCTGACTCGCTGACTCCCTCGACGTCATACTATGTTCAACG
GATGTTTTCTACAAATCGCGGGGATACTATCCTCCCTGTGAATACAACTG
CCACATTTGGACCGCTGTACTGGGTTGCATCCAGGACGAATAGCACGTAT
TTTGTGAAGTTGGCCAACTACGGCGCCCAGAACCAGACTGTACGTGTAAA
GGTGCCCCAAACCAAGACCGGGCATGTAGAAATGCTGTATGGGCCGCAAA
ATGCGACCAATTTGGTGCATAATATTACTGTTCAGCCGACGGTGAAGAAT
GTGACTAGCTCTAGGGGCATTTATTCCCTGGATATGCCGCCGTGGGGGGT
TGCTGTTTTGTCGGTGTGGTGAATGGCTGGAGGGATGCTGAACTTCGGTC
TGGTGCAGCTGTTTCCGCCTACGTACAAGTCGAGGTCAAATGGACTACGG
AATGATGTTGCGACATTTCTGGAAAAGACAGCTCCCTCTTTTCTCCGATT
CCCGGGTGGCAATAATCTAGAAGGACTACAGATCGACAGCCGTTGGCAGT
GGAACCTAACTGTTGGGCCCGTCGTTGATCGTCCCGGGAGACAGGGCGAC
TGGTTCTACCCAAACACCGACGCGCTCGGATTGGACGAATATCTCTGGTG
GTGCGAAGACATGAACATGGAGCCCGTCCTCGCCGTCTGGGACGGCAAAT
CATACGGCGGCATTCTATCCGGCGACGATCTCCAGCCATATATAGACGAT
ATCATGAACGAGCTTGAGTACCTCCTCGGGCCGGTCAACTCCACCTACGG
GAGTATGCGAGCGCAAAACGGGCGCAGCAAACCATGGTCCATAAACTACA
TCGAGATCGGGAACGAAGATGACTTTACCGGCGGATGCGACACATACCCA
GACCGCTTCTATCAGATTTACAACGCCATCAGCAACAGCTACCCGAATAT
CACTCTCATCGCATCGAATATAGACTACCTGTGTCTCCCGATTGAACCCC
CACCCGGCCTGATATACGACTACCATTACTATCGCAAACCGGATGACCTC
GTCGCCATGTTCGACTACTGGGATAACCAGCCTCGCACGCAGCCCATCAT
GGTAGGGGAATATGGATGTCGGGATACCAGCGAGGCAGACGGGATCTTCT
GGTCCTCTATGCAATGTAGCTGCAGTGAGGCAGCGCATATGATTGGCCTG
GAGAGGAACTCGGATGTAGTGAAAATGGCTGCGTATGCGCCACTATTGCA
GCATTTCGGGTATACGCAGTGGTCGCCAACGCTATTCGGCTTCGACTCTA
GTCCTGACTCGCTGACTCCCTCGACGTCATACTATGTTCAACGGATGTTT
TCTACAAATCGCGGGGATACTATCCTCCCTGTGAATACAACTGCCACATT
TGGACCGCTGTACTGGGTTGCATCCAGGACGAATAGCACGTATTTTGTGA
AGTTGGCCAACTACGGCGCCCAGAACCAGACTGTACGTGTAAAGGTGCCC
CAAACCAAGACCGGGCATGTAGAAATGCTGTATGGGCCGCAAAATGCGAC
CAATTTGGTGCATAATATTACTGTTCAGCCGACGGTGAAGAATGTGACTA
GCTCTAGGGGCATTTATTCCCTGGATATGCCGCCGTGGGGGGTTGCTGTT
TTGTCGGTGTGGTGAATGGCTGGAGGGATGCTGAACTTCGGTCTGGTGCA
GCTGTTTCCGCCTACGTACAAGTCGAGGTCAAATGGACTACGGAATGATG
TTGCGACATTTCTGGAAAAGACAGCTCCCTCTTTTCTCCGATTCCCGGGT
GGCAATAATCTAGAAGGACTACAGATCGACAGCCGTTGGCAGTGGAACCT
AACTGTTGGGCCCGTCGTTGATCGTCCCGGGAGACAGGGCGACTGGTTCT
ACCCAAACACCGACGCGCTCGGATTGGACGAATATCTCTGGTGGTGCGAA
GACATGAACATGGAGCCCGTCCTCGCCGTCTGGGACGGCAAATCATACGG
CGGCATTCTATCCGGCGACGATCTCCAGCCATATATAGACGATATCATGA
ACGAGCTTGAGTACCTCCTCGGGCCGGTCAACTCCACCTACGGGAGTATG
CGAGCGCAAAACGGGCGCAGCAAACCATGGTCCATAAACTACATCGAGAT
CGGGAACGAAGATGACTTTACCGGCGGATGCGACACATACCCAGACCGCT
TCTATCAGATTTACAACGCCATCAGCAACAGCTACCCGAATATCACTCTC
ATCGCATCGAATATAGACTACCTGTGTCTCCCGATTGAACCCCCACCCGG
CCTGATATACGACTACCATTACTATCGCAAACCGGATGACCTCGTCGCCA
TGTTCGACTACTGGGATAACCAGCCTCGCACGCAGCCCATCATGGTAGGG
GAATATGGATGTCGGGATACCAGCGAGGCAGACGGGATCTTCTGGTCCTC
TATGCAATGTAGCTGCAGTGAGGCAGCGCATATGATTGGCCTGGAGAGGA
ACTCGGATGTAGTGAAAATGGCTGCGTATGCGCCACTATTGCAGCATTTC
GGGTATACGCAGTGGTCGCCAACGCTATTCGGCTTCGACTCTAGTCCTGA
CTCGCTGACTCCCTCGACGTCATACTATGTTCAACGGATGTTTTCTACAA
ATCGCGGGGATACTATCCTCCCTGTGAATACAACTGCCACATTTGGACCG
CTGTACTGGGTTGCATCCAGGACGAATAGCACGTATTTTGTGAAGTTGGC
CAACTACGGCGCCCAGAACCAGACTGTACGTGTAAAGGTGCCCCAAACCA
AGACCGGGCATGTAGAAATGCTGTATGGGCCGCAAAATGCGACCAATTTG
GTGCATAATATTACTGTTCAGCCGACGGTGAAGAATGTGACTAGCTCTAG
GGGCATTTATTCCCTGGATATGCCGCCGTGGGGGGTTGCTGTTTTGTCGG
TGTGGTGAATGGCTGGAGGGATGCTGAACTTCGGTCTGGTGCAGCTGTTT
CCGCCTACGTACAAGTCGAGGTCAAATGGACTACGGAATGATGTTGCGAC
ATTTCTGGAAAAGACAGCTCCCTCTTTTCTCCGATTCCCGGGTGGCAATA
ATCTAGAAGGACTACAGATCGACAGCCGTTGGCAGTGGAACCTAACTGTT
GGGCCCGTCGTTGATCGTCCCGGGAGACAGGGCGACTGGTTCTACCCAAA
CACCGACGCGCTCGGATTGGACGAATATCTCTGGTGGTGCGAAGACATGA
ACATGGAGCCCGTCCTCGCCGTCTGGGACGGCAAATCATACGGCGGCATT
CTATCCGGCGACGATCTCCAGCCATATATAGACGATATCATGAACGAGCT
TGAGTACCTCCTCGGGCCGGTCAACTCCACCTACGGGAGTATGCGAGCGC
AAAACGGGCGCAGCAAACCATGGTCCATAAACTACATCGAGATCGGGAAC
GAAGATGACTTTACCGGCGGATGCGACACATACCCAGACCGCTTCTATCA
GATTTACAACGCCATCAGCAACAGCTACCCGAATATCACTCTCATCGCAT
CGAATATAGACTACCTGTGTCTCCCGATTGAACCCCCACCCGGCCTGATA
TACGACTACCATTACTATCGCAAACCGGATGACCTCGTCGCCATGTTCGA
CTACTGGGATAACCAGCCTCGCACGCAGCCCATCATGGTAGGGGAATATG
GATGTCGGGATACCAGCGAGGCAGACGGGATCTTCTGGTCCTCTATGCAA
TGTAGCTGCAGTGAGGCAGCGCATATGATTGGCCTGGAGAGGAACTCGGA
TGTAGTGAAAATGGCTGCGTATGCGCCACTATTGCAGCATTTCGGGTATA
CGCAGTGGTCGCCAACGCTATTCGGCTTCGACTCTAGTCCTGACTCGCTG
ACTCCCTCGACGTCATACTATGTTCAACGGATGTTTTCTACAAATCGCGG
GGATACTATCCTCCCTGTGAATACAACTGCCACATTTGGACCGCTGTACT
GGGTTGCATCCAGGACGAATAGCACGTATTTTGTGAAGTTGGCCAACTAC
GGCGCCCAGAACCAGACTGTACGTGTAAAGGTGCCCCAAACCAAGACCGG
GCATGTAGAAATGCTGTATGGGCCGCAAAATGCGACCAATTTGGTGCATA
ATATTACTGTTCAGCCGACGGTGAAGAATGTGACTAGCTCTAGGGGCATT
TATTCCCTGGATATGCCGCCGTGGGGGGTTGCTGTTTTGTCGGTGTGGTG
A back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046556 | alpha-L-arabinofuranosidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0046373 | L-arabinose metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR010720 |
| DBxref | PFAM:PF06964 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:185949..187541 + |
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