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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:187786..189528- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005941-T1 ID=CBS51388_005941-T1|Name=CBS51388_005941-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1743bp|location=Sequence derived from alignment at An09:187786..189528- (Aspergillus niger CBS 513.88)
ATGCGTCAATACTCGCGCGCCGCCGCGGCCACCGTTGCTCTGGCAGCATC
GGCCCGCGCTGCCAACTCATCTTCCCTTGCGTCTCTCTGTACCGTCTCTC
ACGTCCAGTCGGCTCTCCCTGCCAATGGCACTCTGCTCGGTATTGATCTA
ATCCCTTCGTCCGTGACGGCTAAGACCACCACCGAACGCGGGAGCGAGAC
TGAGTACTGTGCTGTGTCCGTCTCTTACGTCCACACTGGTACCACCGACG
AGATCGTTCTGAACTACGGCTTCCCTAGCCCTGCCGACTTCAAGAACCGC
TTCTATGTGGCCGGTGGCTTCGGTTATTCCCTGAGCACCTCCTCTACTGG
TGGTCTCGAATATGGCGCCGTCGGAGGTGCCACCGATGCCGGCTATGGTG
CTTTGAACGGCACTACGGTCGACGAGGTCAACCTCTCCGGCAACGGCACT
ATCAACTGGGATCCCATCTTCATGTTCGCCTACCAGGCCCTGGGAGAGAT
GACCACTGTTGGAAAGCCTCTCACCCGCGCCTTCTATGGCTTGGCCGATG
ATGCCAAGGTATACACCTACTACGAGGGTTGCTCTGACGGTGGCCGTCAA
GGTATGAGCCAGATCCAGCGCTACGGTGATGAATACGATGGTGCCATCAT
TGGTGCGCCTGCGTTCCGTTACGGTCAACAGCAGGTCAACCACCTCTTTT
CCAGTGTGGTCGAGCAGACCCTCGACTACTACCCTCCTACCTGCGAGTTG
GAAAAAATTGTTAACGCCACCATCGCTGCCTGCGATCCCCTCGATGGACG
CACCGACGGAGTCATCTCTCGTACCGATCTCTGCCAGCTCGACTTCAACC
TGACTTCTATTATCGGCGAACCCTACCACTGTGCTGCTGAAGTCAGTACC
TCTCTTGGTTTCAACTTCAACAAGCGCAATGACGGCACCTCGACCTCCTA
CACCCCGGCCCAGAACGGAAATGTTACCGCAGAAGGTGTTGCCGTGGCTC
AGACTATCTACGACGGTCTATTCAACACTGCCGGTGAACGCGCCTACCTG
TCCTACCGTATCGGGTCCGAATTTTCGGATGGCGAGACCGCCTACGACAA
CAGCACCGGCACCTGGGGTGTGGATATCCCCTCTACTGGTGGTGAATTTG
TTACTCGTTTTGTTGAACTTGTTGAACTCAGCAACCTCGAGACCCTCAAC
AATGTGACCTATGATACCCTTGTGGACTGGATGAACACGGCCATGGTCCG
CTACATGGACACTCTGCAAACAACCCTCCCTGACCTGACCACCTTCAAGT
CTACCGGTGGTAAGGTCATCCACTACCACGGCGAGAACGACCCCAGTGTG
CCTACTGCTTCTTCTGTGCACTACTGGCAATCTGTTATGAGCATCATGTA
CCCCAACCTCGGATCCTCTAAGGCCATCGAGCAGATGAAGGAATGGTATC
AGCTGTACCTGGTCCCCGGTGCTGCTCACTGCGGTCGCAACACTCTCCAG
CCCAACGGTCCTTTCCCTGAAGATAACATGGCCACCATGATCAAGTGGGT
CGAGCAGGATGTCCAGCCCACCGGTTTGAACGCTACCGTCGATGCTGGCA
AGTACGACGGCGAGGTTCAGTCCCTGTGCCAGTTCCCCAAGCGCCCTGTC
TGGAAGAGCAACAAGTGGGAGTGTGAGTCCGATGACGAGGGTGCTGACAC
TTTCTACTACACTTTCCCCGCCTTCAAGGTGCCCATCTACTAA back to topCoding sequence (CDS) from alignment at An09:187786..189528- >CBS51388_005941-T1 ID=CBS51388_005941-T1|Name=CBS51388_005941-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1743bp|location=Sequence derived from alignment at An09:187786..189528- (Aspergillus niger CBS 513.88)
ATGCGTCAATACTCGCGCGCCGCCGCGGCCACCGTTGCTCTGGCAGCATC
GGCCCGCGCTGCCAACTCATCTTCCCTTGCGTCTCTCTGTACCGTCTCTC
ACGTCCAGTCGGCTCTCCCTGCCAATGGCACTCTGCTCGGTATTGATCTA
ATCCCTTCGTCCGTGACGGCTAAGACCACCACCGAACGCGGGAGCGAGAC
TGAGTACTGTGCTGTGTCCGTCTCTTACGTCCACACTGGTACCACCGACG
AGATCGTTCTGAACTACGGCTTCCCTAGCCCTGCCGACTTCAAGAACCGC
TTCTATGTGGCCGGTGGCTTCGGTTATTCCCTGAGCACCTCCTCTACTGG
TGGTCTCGAATATGGCGCCGTCGGAGGTGCCACCGATGCCGGCTATGGTG
CTTTGAACGGCACTACGGTCGACGAGGTCAACCTCTCCGGCAACGGCACT
ATCAACTGGGATCCCATCTTCATGTTCGCCTACCAGGCCCTGGGAGAGAT
GACCACTGTTGGAAAGCCTCTCACCCGCGCCTTCTATGGCTTGGCCGATG
ATGCCAAGGTATACACCTACTACGAGGGTTGCTCTGACGGTGGCCGTCAA
GGTATGAGCCAGATCCAGCGCTACGGTGATGAATACGATGGTGCCATCAT
TGGTGCGCCTGCGTTCCGTTACGGTCAACAGCAGGTCAACCACCTCTTTT
CCAGTGTGGTCGAGCAGACCCTCGACTACTACCCTCCTACCTGCGAGTTG
GAAAAAATTGTTAACGCCACCATCGCTGCCTGCGATCCCCTCGATGGACG
CACCGACGGAGTCATCTCTCGTACCGATCTCTGCCAGCTCGACTTCAACC
TGACTTCTATTATCGGCGAACCCTACCACTGTGCTGCTGAAGTCAGTACC
TCTCTTGGTTTCAACTTCAACAAGCGCAATGACGGCACCTCGACCTCCTA
CACCCCGGCCCAGAACGGAAATGTTACCGCAGAAGGTGTTGCCGTGGCTC
AGACTATCTACGACGGTCTATTCAACACTGCCGGTGAACGCGCCTACCTG
TCCTACCGTATCGGGTCCGAATTTTCGGATGGCGAGACCGCCTACGACAA
CAGCACCGGCACCTGGGGTGTGGATATCCCCTCTACTGGTGGTGAATTTG
TTACTCGTTTTGTTGAACTTGTTGAACTCAGCAACCTCGAGACCCTCAAC
AATGTGACCTATGATACCCTTGTGGACTGGATGAACACGGCCATGGTCCG
CTACATGGACACTCTGCAAACAACCCTCCCTGACCTGACCACCTTCAAGT
CTACCGGTGGTAAGGTCATCCACTACCACGGCGAGAACGACCCCAGTGTG
CCTACTGCTTCTTCTGTGCACTACTGGCAATCTGTTATGAGCATCATGTA
CCCCAACCTCGGATCCTCTAAGGCCATCGAGCAGATGAAGGAATGGTATC
AGCTGTACCTGGTCCCCGGTGCTGCTCACTGCGGTCGCAACACTCTCCAG
CCCAACGGTCCTTTCCCTGAAGATAACATGGCCACCATGATCAAGTGGGT
CGAGCAGGATGTCCAGCCCACCGGTTTGAACGCTACCGTCGATGCTGGCA
AGTACGACGGCGAGGTTCAGTCCCTGTGCCAGTTCCCCAAGCGCCCTGTC
TGGAAGAGCAACAAGTGGGAGTGTGAGTCCGATGACGAGGGTGCTGACAC
TTTCTACTACACTTTCCCCGCCTTCAAGGTGCCCATCTACTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR011118 |
| DBxref | PFAM:PF07519 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:187786..189528 - |
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