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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:196563..199888- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005943-T1 ID=CBS51388_005943-T1|Name=CBS51388_005943-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3326bp|location=Sequence derived from alignment at An09:196563..199888- (Aspergillus niger CBS 513.88)
ATGAACACACCTCCTATCGCGGCTGCGTCTGGTCAGCAGCCAGCCGACTC
TTCATCCACCCACGACCTGGAGGCCGATGAAGAAACACTCAATGACCAGG
TGCGAAGTACTGCTCGATCCCAGCGAATCACCTTCGACGGTCCCAATGTA
CAAGACGGCACTCGGTCCATATACTCTCCTGGTGACAAACGTTCCCGCAG
TCGAGATACAATTCGCAGCACTCGCAGTATCCCCCAGTCCCCAACGGCAG
CCGGTATACCAATCGAGTTCCGTACCCTGTCATTTCAAATCTCCGAATCC
CAGGCAGCCCCAGAGCATGTGTTGAAAGAGCGAGGAAAGGAAGAGAAGAA
GCCAGACCAGGACTACTTTGAGAGTCTGGACTTCCATCTGCTAGCTGCCG
ACCGGTTGTGCCAGCAGTTCAATGTTGATGCAAGCCGTGGCTTGAGTACT
GACTCGGCATCGACTCGTCTTCAACGCGATGGGAAGAACATCATCGCACA
CCACGGGGAGAATTATGTGAAGAAGATCCTTGGCTATATCTTCGGCGGCT
TCTGCTCTGTCCTCTGGATCGGCGTGATTATTTTCTTTATATGCTGGAAA
CCGCTCAGCAATCCTCCCTCAGTCACAAACTTGGCCATGGCCATCCTGGT
CATCATCGTCATCATCCTGCAAGCATCATTCTCCGCCTTTCAGGATTGGT
CGACATCGCGCGTGATGAAATAATCCTGGGCCTTCTGCCTGCGGAGGCTC
TCGTTCTCCGCGAAGGGAACTTGGTTAAGCTGCCAGCTACTGACCTTGTC
GCGGGGGATGTCGTCCATATCTCCATTGGGAACAAAGTGCCGGCTGACAT
GCGCATTATCAAAAGCTCGGGCGATGTTCGATTCGATCGTTCTATCCTGA
CGGGAGAGTCCGATGAGGTCGAGGGTGCCACCGACGCAACCGACCAAAAC
TTCCTGGAGACCCGCAATATCGCCTTCATGGGCACCGGTGTGACCAACGG
CAATGCTGTTGGCGTTGTTGTCCTGACTGGGAGTCGCTCCGTCATGGGTC
GCTTGGCGTCCATTACAGCTGACGTAAAGGAGAAGCCCACGCTCATCCAG
AAGGAGATCACGCGCTTCGTACGGATTATCGTGGTGCTCACTGTCATCCT
GGCGGCAGCCATCCTATTCAGCTGGGTGGGCTGGCTGCGCGTTGACCACC
CACAATTCATGAGCGTTGTTGAGATGCTGAACGATGTTATGGGCTGCGTT
GTCGCCTTCATTCCCGAGGGTATGCCGGTCGGAGTTGCCCTCACCTTAAT
GATTGTGGCCAAGAGGATGAAGGCGAACAATATATTGCCCAAGGGACTGG
CGACCGTGGAAACCCTTGGCTGCGTCAACGTGCTCTGCTCAGACAAAACC
GGCACACTGACCCAGAACAAGATGTTTGTGCAGTCGGTAGGCCTCGTTGA
CCAGGAATTCTTCGTTGAGGATCTGGTGAACGCGCAGCAGAAATCGGTTC
CCCTTCCGGAACCTCTTGAGCCCCTCTTGCGAGGCTCCAGGCTTTGCAAT
GATGCCTTCTTTGACCAAGAAACATTGACGTTGCCAATTTCTGAACGCAT
TGTTAATGGAAACGCAACCGACGCGGCTGTTCTGCGTTTGGCCGAAATGC
TGAGAGCAAATGGACAGACTGATCTTCATGATTACGAACGCACCCATCAA
ATCCCCTTCAACTCGAAAAACAAGTGGATGCTCACTGTGCACCAAAATCC
AACCTCCTCTACCCATAGCCTTATCTATGTCAAGGGTGCCCCGGATGTAC
TTCTGCCCAAGTGTACATCATACTGGTCCAAGGACGGTGTGGCCAAGCCT
CTGGATGCAACTGCGAAGGATATGTTCAGTGCATTCCAGCAAAAGCTCTC
CCGCCGCGCCCAGCGAGTCATTGTTCTTTGCCAACGGGAATATGCACCGA
CTGCTGCAGTGGGCACAAACCAGTTTAACGACGAGCTGCTAGCCAATGGC
GTGCAGGACCTGACAATTATCGGCATCTTTGGTATCATCGACCCTCCCCG
CCCGGAAATCCCGGAAACAGTGGCGGCCTGTCGACGCGCTGGCATTCGCT
TCTTCATGGTGACAGGTGATTTTGGTCTGACTGCTGCGGCGATTGCACGG
GACATTGGAATTTTCAGCGGAACGGCCGAGCCAGATACTGTTGCGGACCT
TGTGGCATCACCGGTCGCAGTGCCTGCTGAGAAGAATGAAGAAAGATCGA
GACGCAGTCTAATGGTGGAAGGGTCCCAGATCTCAACTCTGAGCGAAAAC
CAGTGGAATTCGATCTGCCAGTATGAGGAGATTGTCTTTGCCCGTACCAC
TCCGGAGCAAAAGCTGCGCATTGTCGAGGAGCTCAAGTCCCGCGACAATG
TCGTGGCCGTGACAGGCGATGGAGTCAACGATGCCCCTGCCTTGCGCGCG
GCTGATATCGGAATTGCCGTTGTCTCAGGCAGCGACGTTGCCATCGAAGC
GGCGGACCTGGTGTTGCTCGATAAGTTCGATTCCATCGTGGAGGCTATCC
GCCTGGGTCGGCTGGTATTCCAGAACCTCCAGAAGGTTATCGCTTATCTG
CTGCCGGCAGGCAGTTGGTCTGAGATCTGGCCAGTGATTATGAACGTTTT
CTTTGGTGTCCCGTTGCCGCTGAGTTCCTTCCTGATGATCATCATCTGTG
TATTCACGGATCTGTTCTTGTCGCTGTCGCTCATCATGGAGAAGGAAGAA
TTCGACCTGCTTAGCCTCCCACCTCGCAACCACAAAACGGATCACCTGAT
CAACCTTCGGATCTACGGGCAGTCCTACCTCTTCGTCGGAGTCATGGAGG
CCTTCTGTGCACATATCATGTTCTTCCTGTACATGTACAAGAAAGCGGGC
ATTCCTTTCCACGCCCTGGTATTCGCATTCGAGAAATACTCGGACGGCTT
CTACGGCTATACAGAGGCCGAGCTGACGAATTTCAACAATGTCGGACAGA
GCGTGTACTTCGTCACGTTGGTTATCATGCAATGGGGCAATATCCTCTCC
GTCCGGAGCAAGCGCATGTCCATCCTGCAGGCCGATCCTATTCGCGCTAA
ACGCCGGAATCCATGGCTACCTCTGGCTATGCTCGTGTCCTTGGTGATTG
CTATCTTTGTGACGGAGGAGCCTGGTCTGCAATCCCTGTTTAATACCGCC
TCTATCCCGTTGGAGTTTTGGTTTATTCCATTGGCTCTGGCGTTCGGCGT
CCTGGTCATGGATGAGTTGCGGAAGGTGTTGGTGCGCGTGTTCCCGCGGG
GACCTATCGCGAAGATTGCGTGGTGA back to topCoding sequence (CDS) from alignment at An09:196563..199888- >CBS51388_005943-T1 ID=CBS51388_005943-T1|Name=CBS51388_005943-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6582bp|location=Sequence derived from alignment at An09:196563..199888- (Aspergillus niger CBS 513.88)
CAATCCTCCCTCAGTCACAAACTTGGCCATGGCCATCCTGGTCATCATCG
TCATCATCCTGCAAGCATCATTCTCCGCCTTTCAGGATTGGTCGACATCG
CGCGTGATGAAATAATCCTGGGCCTTCTGCCTGCGGAGGCTCTCGTTCTC
CGCGAAGGGAACTTGGTTAAGCTGCCAGCTACTGACCTTGTCGCGGGGGA
TGTCGTCCATATCTCCATTGGGAACAAAGTGCCGGCTGACATGCGCATTA
TCAAAAGCTCGGGCGATGTTCGATTCGATCGTTCTATCCTGACGGGAGAG
TCCGATGAGGTCGAGGGTGCCACCGACGCAACCGACCAAAACTTCCTGGA
GACCCGCAATATCGCCTTCATGGGCACCGGTGTGACCAACGGCAATGCTG
TTGGCGTTGTTGTCCTGACTGGGAGTCGCTCCGTCATGGGTCGCTTGGCG
TCCATTACAGCTGACGTAAAGGAGAAGCCCACGCTCATCCAGAAGGAGAT
CACGCGCTTCGTACGGATTATCGTGGTGCTCACTGTCATCCTGGCGGCAG
CCATCCTATTCAGCTGGGTGGGCTGGCTGCGCGTTGACCACCCACAATTC
ATGAGCGTTGTTGAGATGCTGAACGATGTTATGGGCTGCGTTGTCGCCTT
CATTCCCGAGGGTATGCCGGTCGGAGTTGCCCTCACCTTAATGATTGTGG
CCAAGAGGATGAAGGCGAACAATATATTGCCCAAGGGACTGGCGACCGTG
GAAACCCTTGGCTGCGTCAACGTGCTCTGCTCAGACAAAACCGGCACACT
GACCCAGAACAAGATGTTTGTGCAGTCGGTAGGCCTCGTTGACCAGGAAT
TCTTCGTTGAGGATCTGGTGAACGCGCAGCAGAAATCGGTTCCCCTTCCG
GAACCTCTTGAGCCCCTCTTGCGAGGCTCCAGGCTTTGCAATGATGCCTT
CTTTGACCAAGAAACATTGACGTTGCCAATTTCTGAACGCATTGTTAATG
GAAACGCAACCGACGCGGCTGTTCTGCGTTTGGCCGAAATGCTGAGAGCA
AATGGACAGACTGATCTTCATGATTACGAACGCACCCATCAAATCCCCTT
CAACTCGAAAAACAAGTGGATGCTCACTGTGCACCAAAATCCAACCTCCT
CTACCCATAGCCTTATCTATGTCAAGGGTGCCCCGGATGTACTTCTGCCC
AAGTGTACATCATACTGGTCCAAGGACGGTGTGGCCAAGCCTCTGGATGC
AACTGCGAAGGATATGTTCAGTGCATTCCAGCAAAAGCTCTCCCGCCGCG
CCCAGCGAGTCATTGTTCTTTGCCAACGGGAATATGCACCGACTGCTGCA
GTGGGCACAAACCAGTTTAACGACGAGCTGCTAGCCAATGGCGTGCAGGA
CCTGACAATTATCGGCATCTTTGGTATCATCGACCCTCCCCGCCCGGAAA
TCCCGGAAACAGTGGCGGCCTGTCGACGCGCTGGCATTCGCTTCTTCATG
GTGACAGGTGATTTTGGTCTGACTGCTGCGGCGATTGCACGGGACATTGG
AATTTTCAGCGGAACGGCCGAGCCAGATACTGTTGCGGACCTTGTGGCAT
CACCGGTCGCAGTGCCTGCTGAGAAGAATGAAGAAAGATCGAGACGCAGT
CTAATGGTGGAAGGGTCCCAGATCTCAACTCTGAGCGAAAACCAGTGGAA
TTCGATCTGCCAGTATGAGGAGATTGTCTTTGCCCGTACCACTCCGGAGC
AAAAGCTGCGCATTGTCGAGGAGCTCAAGTCCCGCGACAATGTCGTGGCC
GTGACAGGCGATGGAGTCAACGATGCCCCTGCCTTGCGCGCGGCTGATAT
CGGAATTGCCGTTGTCTCAGGCAGCGACGTTGCCATCGAAGCGGCGGACC
TGGTGTTGCTCGATAAGTTCGATTCCATCGTGGAGGCTATCCGCCTGGGT
CGGCTGGTATTCCAGAACCTCCAGAAGGTTATCGCTTATCTGCTGCCGGC
AGGCAGTTGGTCTGAGATCTGGCCAGTGATTATGAACGTTTTCTTTGGTG
TCCCGTTGCCGCTGAGTTCCTTCCTGATGATCATCATCTGTGTATTCACG
GATCTGTTCTTGTCGCTGTCGCTCATCATGGAGAAGGAAGAATTCGACCT
GCTTAGCCTCCCACCTCGCAACCACAAAACGGATCACCTGATCAACCTTC
GGATCTACGGGCAGTCCTACCTCTTCGTCGGAGTCATGGAGGCCTTCTGT
GCACATATCATGTTCTTCCTGTACATGTACAAGAAAGCGGGCATTCCTTT
CCACGCCCTGGTATTCGCATTCGAGAAATACTCGGACGGCTTCTACGGCT
ATACAGAGGCCGAGCTGACGAATTTCAACAATGTCGGACAGAGCGTGTAC
TTCGTCACGTTGGTTATCATGCAATGGGGCAATATCCTCTCCGTCCGGAG
CAAGCGCATGTCCATCCTGCAGGCCGATCCTATTCGCGCTAAACGCCGGA
ATCCATGGCTACCTCTGGCTATGCTCGTGTCCTTGGTGATTGCTATCTTT
GTGACGGAGGAGCCTGGTCTGCAATCCCTGTTTAATACCGCCTCTATCCC
GTTGGAGTTTTGGTTTATTCCATTGGCTCTGGCGTTCGGCGTCCTGGTCA
TGGATGAGTTGCGGAAGGTGTTGGTGCGCGTGTTCCCGCGGGGACCTATC
GCGAAGATTGCGTGGTGAATGAACACACCTCCTATCGCGGCTGCGTCTGG
TCAGCAGCCAGCCGACTCTTCATCCACCCACGACCTGGAGGCCGATGAAG
AAACACTCAATGACCAGGTGCGAAGTACTGCTCGATCCCAGCGAATCACC
TTCGACGGTCCCAATGTACAAGACGGCACTCGGTCCATATACTCTCCTGG
TGACAAACGTTCCCGCAGTCGAGATACAATTCGCAGCACTCGCAGTATCC
CCCAGTCCCCAACGGCAGCCGGTATACCAATCGAGTTCCGTACCCTGTCA
TTTCAAATCTCCGAATCCCAGGCAGCCCCAGAGCATGTGTTGAAAGAGCG
AGGAAAGGAAGAGAAGAAGCCAGACCAGGACTACTTTGAGAGTCTGGACT
TCCATCTGCTAGCTGCCGACCGGTTGTGCCAGCAGTTCAATGTTGATGCA
AGCCGTGGCTTGAGTACTGACTCGGCATCGACTCGTCTTCAACGCGATGG
GAAGAACATCATCGCACACCACGGGGAGAATTATGTGAAGAAGATCCTTG
GCTATATCTTCGGCGGCTTCTGCTCTGTCCTCTGGATCGGCCAATCCTCC
CTCAGTCACAAACTTGGCCATGGCCATCCTGGTCATCATCGTCATCATCC
TGCAAGCATCATTCTCCGCCTTTCAGGATTGGTCGACATCGCGCGTGATG
AAATAATCCTGGGCCTTCTGCCTGCGGAGGCTCTCGTTCTCCGCGAAGGG
AACTTGGTTAAGCTGCCAGCTACTGACCTTGTCGCGGGGGATGTCGTCCA
TATCTCCATTGGGAACAAAGTGCCGGCTGACATGCGCATTATCAAAAGCT
CGGGCGATGTTCGATTCGATCGTTCTATCCTGACGGGAGAGTCCGATGAG
GTCGAGGGTGCCACCGACGCAACCGACCAAAACTTCCTGGAGACCCGCAA
TATCGCCTTCATGGGCACCGGTGTGACCAACGGCAATGCTGTTGGCGTTG
TTGTCCTGACTGGGAGTCGCTCCGTCATGGGTCGCTTGGCGTCCATTACA
GCTGACGTAAAGGAGAAGCCCACGCTCATCCAGAAGGAGATCACGCGCTT
CGTACGGATTATCGTGGTGCTCACTGTCATCCTGGCGGCAGCCATCCTAT
TCAGCTGGGTGGGCTGGCTGCGCGTTGACCACCCACAATTCATGAGCGTT
GTTGAGATGCTGAACGATGTTATGGGCTGCGTTGTCGCCTTCATTCCCGA
GGGTATGCCGGTCGGAGTTGCCCTCACCTTAATGATTGTGGCCAAGAGGA
TGAAGGCGAACAATATATTGCCCAAGGGACTGGCGACCGTGGAAACCCTT
GGCTGCGTCAACGTGCTCTGCTCAGACAAAACCGGCACACTGACCCAGAA
CAAGATGTTTGTGCAGTCGGTAGGCCTCGTTGACCAGGAATTCTTCGTTG
AGGATCTGGTGAACGCGCAGCAGAAATCGGTTCCCCTTCCGGAACCTCTT
GAGCCCCTCTTGCGAGGCTCCAGGCTTTGCAATGATGCCTTCTTTGACCA
AGAAACATTGACGTTGCCAATTTCTGAACGCATTGTTAATGGAAACGCAA
CCGACGCGGCTGTTCTGCGTTTGGCCGAAATGCTGAGAGCAAATGGACAG
ACTGATCTTCATGATTACGAACGCACCCATCAAATCCCCTTCAACTCGAA
AAACAAGTGGATGCTCACTGTGCACCAAAATCCAACCTCCTCTACCCATA
GCCTTATCTATGTCAAGGGTGCCCCGGATGTACTTCTGCCCAAGTGTACA
TCATACTGGTCCAAGGACGGTGTGGCCAAGCCTCTGGATGCAACTGCGAA
GGATATGTTCAGTGCATTCCAGCAAAAGCTCTCCCGCCGCGCCCAGCGAG
TCATTGTTCTTTGCCAACGGGAATATGCACCGACTGCTGCAGTGGGCACA
AACCAGTTTAACGACGAGCTGCTAGCCAATGGCGTGCAGGACCTGACAAT
TATCGGCATCTTTGGTATCATCGACCCTCCCCGCCCGGAAATCCCGGAAA
CAGTGGCGGCCTGTCGACGCGCTGGCATTCGCTTCTTCATGGTGACAGGT
GATTTTGGTCTGACTGCTGCGGCGATTGCACGGGACATTGGAATTTTCAG
CGGAACGGCCGAGCCAGATACTGTTGCGGACCTTGTGGCATCACCGGTCG
CAGTGCCTGCTGAGAAGAATGAAGAAAGATCGAGACGCAGTCTAATGGTG
GAAGGGTCCCAGATCTCAACTCTGAGCGAAAACCAGTGGAATTCGATCTG
CCAGTATGAGGAGATTGTCTTTGCCCGTACCACTCCGGAGCAAAAGCTGC
GCATTGTCGAGGAGCTCAAGTCCCGCGACAATGTCGTGGCCGTGACAGGC
GATGGAGTCAACGATGCCCCTGCCTTGCGCGCGGCTGATATCGGAATTGC
CGTTGTCTCAGGCAGCGACGTTGCCATCGAAGCGGCGGACCTGGTGTTGC
TCGATAAGTTCGATTCCATCGTGGAGGCTATCCGCCTGGGTCGGCTGGTA
TTCCAGAACCTCCAGAAGGTTATCGCTTATCTGCTGCCGGCAGGCAGTTG
GTCTGAGATCTGGCCAGTGATTATGAACGTTTTCTTTGGTGTCCCGTTGC
CGCTGAGTTCCTTCCTGATGATCATCATCTGTGTATTCACGGATCTGTTC
TTGTCGCTGTCGCTCATCATGGAGAAGGAAGAATTCGACCTGCTTAGCCT
CCCACCTCGCAACCACAAAACGGATCACCTGATCAACCTTCGGATCTACG
GGCAGTCCTACCTCTTCGTCGGAGTCATGGAGGCCTTCTGTGCACATATC
ATGTTCTTCCTGTACATGTACAAGAAAGCGGGCATTCCTTTCCACGCCCT
GGTATTCGCATTCGAGAAATACTCGGACGGCTTCTACGGCTATACAGAGG
CCGAGCTGACGAATTTCAACAATGTCGGACAGAGCGTGTACTTCGTCACG
TTGGTTATCATGCAATGGGGCAATATCCTCTCCGTCCGGAGCAAGCGCAT
GTCCATCCTGCAGGCCGATCCTATTCGCGCTAAACGCCGGAATCCATGGC
TACCTCTGGCTATGCTCGTGTCCTTGGTGATTGCTATCTTTGTGACGGAG
GAGCCTGGTCTGCAATCCCTGTTTAATACCGCCTCTATCCCGTTGGAGTT
TTGGTTTATTCCATTGGCTCTGGCGTTCGGCGTCCTGGTCATGGATGAGT
TGCGGAAGGTGTTGGTGCGCGTGTTCCCGCGGGGACCTATCGCGAAGATT
GCGTGGTGAATGAACACACCTCCTATCGCGGCTGCGTCTGGTCAGCAGCC
AGCCGACTCTTCATCCACCCACGACCTGGAGGCCGATGAAGAAACACTCA
ATGACCAGGTGCGAAGTACTGCTCGATCCCAGCGAATCACCTTCGACGGT
CCCAATGTACAAGACGGCACTCGGTCCATATACTCTCCTGGTGACAAACG
TTCCCGCAGTCGAGATACAATTCGCAGCACTCGCAGTATCCCCCAGTCCC
CAACGGCAGCCGGTATACCAATCGAGTTCCGTACCCTGTCATTTCAAATC
TCCGAATCCCAGGCAGCCCCAGAGCATGTGTTGAAAGAGCGAGGAAAGGA
AGAGAAGAAGCCAGACCAGGACTACTTTGAGAGTCTGGACTTCCATCTGC
TAGCTGCCGACCGGTTGTGCCAGCAGTTCAATGTTGATGCAAGCCGTGGC
TTGAGTACTGACTCGGCATCGACTCGTCTTCAACGCGATGGGAAGAACAT
CATCGCACACCACGGGGAGAATTATGTGAAGAAGATCCTTGGCTATATCT
TCGGCGGCTTCTGCTCTGTCCTCTGGATCGGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000166 | nucleotide binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036412 |
| DBxref | InterPro:IPR008250 |
| DBxref | InterPro:IPR023298 |
| DBxref | InterPro:IPR018303 |
| DBxref | InterPro:IPR001757 |
| DBxref | InterPro:IPR023299 |
| DBxref | InterPro:IPR006068 |
| DBxref | InterPro:IPR023214 |
| DBxref | InterPro:IPR004014 |
| DBxref | PFAM:PF00702 |
| DBxref | PFAM:PF00122 |
| DBxref | PFAM:PF00690 |
| DBxref | PFAM:PF00689 |
| DBxref | PFAM:PF13246 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:196563..199888 - |
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