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CBS51388_005947-T1, CBS51388_005947-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005947-T1
Unique NameCBS51388_005947-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:214291..216009+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005947-T1 ID=CBS51388_005947-T1|Name=CBS51388_005947-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1719bp|location=Sequence derived from alignment at An09:214291..216009+ (Aspergillus niger CBS 513.88)
ATGCCTTCAATCAAAGTTGCTGAGTACCTCTTCCGTCGGCTCAAAGACCT
GGGCGTAGCTTCCGTCCACGGTGTGCCGGGCGATTTTAACCTCACTTTGC
TCGACTATGTGGAGCCCGCCGGTTTGCGATGGGTCGGTAACGCGAACGAG
CTAAACGCCGCCTACGCCGCCGACGGGTACGCCCGAATCAAAGGCATTGG
CGCGGTTGTCACCACCTTCGGTGTTGGGGAGCTGTCTGCTGTGAACGCGA
TCGCTGGAGCCTACACTGAACGTGCGCCCGTCGTGCACATTGTGGGAACA
CCAGCCCGGGATTTGCAGGAGGGACGGAAATTGGTCCACCATACCTTCAA
TGATGGCGAATATGGGCGGTTTGCTAAGATCTACGAACACTTGACTACCG
CTCAGGCCAGCCTGCGAGATCCACGAACCGCGCCTGCGCAGATCGACGAG
GTACTGCGACAATGTCTCCTTCACAGCCGACCGGTCTATATCGAGGTGCC
AATGGATATGGTGCACCAGTATGTGTCAGATGAAAGACTCGCGCTCGCCG
TCAGCACACCCGACCCTGTTCCCTCCCAGACCCAAGATGATGTCGTGGTG
CGAATTCTGGAACGTATATATGCAGCAAAGCAGCCGATCATTCTCGTCGA
TGGCGAAATCAGACCCATAGGAATCTTGGAAGAGGTCCAGAAGATCATCA
ATGCCACGAACTTCCCGACCTGGACGACCAATTTCGGCAAAGGCCTGGTG
GATGATACACGGCCAAACTTCCATGGCATCTACCGCGGCAACTATGACCC
CACTGAAGTGCAAGACTTCTACAATGGGGCAGACTTGGTGTTGTGTTTCG
GGCCACACTTCAGCTCCACCAATTCCTACTTCTATCAGATTATTCCTAAG
CCCGAAGTTGCTATTTTGTTCACCGATACCGAAGTTAAGTTTGGAACGGA
GATCATTCGTGACATTCCCGCCAAGCTTACCACGTCTCGCCTCATCGAGA
CGATCGACCTCAACCGAATTCATCGCTATGACCCCTACCCCAGTTTGCCC
CGTGACGAACTCGTTCCATTCTCCGAAGTAGAAGGAGATAAACCACTTTC
CCAAGATAAACTGTGGCGAGTGTTTGCGAACTTCCTTCGCCCAGGCGACA
TCCTACTGGGAGAAACAGGCACGGCTGGATATGGTGTCCGCGAGATGGCG
TTTCCCAAGCACACCCGCCTTTTCGCACCCGTGACCTGGCTATCTATCGG
GTATATGCTACCAGGAGCACAGGGAGCCGCACTTGCGCAAGAAGAATTGA
TGGCATCAGACAACTACCACGGCATTAAAGATGCACGCACAGTCCTTCTC
ATCGGCGATGGCAGTTTTCAAATGACCGCGCAGGAATTATCAACAATCAT
TCGACTCAAGCTGAACGTCGTGGTCTTCCTCATCAACAACGACGGATACA
CGATCGAGCGCTGCATCCATGGCCGGAAACAGGGATACAACGATGTGTCG
CGATGGAGATATCTACAGGCCCCCAGCTTCTTTGGAGCGAGTGAAGACAC
GTACACTGCCTCAGTTAGAACCTGGAAGGAGCTACAAGATGTTTTCTCGA
ATGATGTTGTCAGTAATGGGAAAGAGCTGCGGATGGTTGAGATAATGCTA
GACCGTGAGGACGCTCCTATTGGACCTTTGTCGATGCTTATAGATCAGCA
AAGACGTACCGGCGCTTAG
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Coding sequence (CDS) from alignment at An09:214291..216009+

>CBS51388_005947-T1 ID=CBS51388_005947-T1|Name=CBS51388_005947-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1719bp|location=Sequence derived from alignment at An09:214291..216009+ (Aspergillus niger CBS 513.88)
ATGCCTTCAATCAAAGTTGCTGAGTACCTCTTCCGTCGGCTCAAAGACCT
GGGCGTAGCTTCCGTCCACGGTGTGCCGGGCGATTTTAACCTCACTTTGC
TCGACTATGTGGAGCCCGCCGGTTTGCGATGGGTCGGTAACGCGAACGAG
CTAAACGCCGCCTACGCCGCCGACGGGTACGCCCGAATCAAAGGCATTGG
CGCGGTTGTCACCACCTTCGGTGTTGGGGAGCTGTCTGCTGTGAACGCGA
TCGCTGGAGCCTACACTGAACGTGCGCCCGTCGTGCACATTGTGGGAACA
CCAGCCCGGGATTTGCAGGAGGGACGGAAATTGGTCCACCATACCTTCAA
TGATGGCGAATATGGGCGGTTTGCTAAGATCTACGAACACTTGACTACCG
CTCAGGCCAGCCTGCGAGATCCACGAACCGCGCCTGCGCAGATCGACGAG
GTACTGCGACAATGTCTCCTTCACAGCCGACCGGTCTATATCGAGGTGCC
AATGGATATGGTGCACCAGTATGTGTCAGATGAAAGACTCGCGCTCGCCG
TCAGCACACCCGACCCTGTTCCCTCCCAGACCCAAGATGATGTCGTGGTG
CGAATTCTGGAACGTATATATGCAGCAAAGCAGCCGATCATTCTCGTCGA
TGGCGAAATCAGACCCATAGGAATCTTGGAAGAGGTCCAGAAGATCATCA
ATGCCACGAACTTCCCGACCTGGACGACCAATTTCGGCAAAGGCCTGGTG
GATGATACACGGCCAAACTTCCATGGCATCTACCGCGGCAACTATGACCC
CACTGAAGTGCAAGACTTCTACAATGGGGCAGACTTGGTGTTGTGTTTCG
GGCCACACTTCAGCTCCACCAATTCCTACTTCTATCAGATTATTCCTAAG
CCCGAAGTTGCTATTTTGTTCACCGATACCGAAGTTAAGTTTGGAACGGA
GATCATTCGTGACATTCCCGCCAAGCTTACCACGTCTCGCCTCATCGAGA
CGATCGACCTCAACCGAATTCATCGCTATGACCCCTACCCCAGTTTGCCC
CGTGACGAACTCGTTCCATTCTCCGAAGTAGAAGGAGATAAACCACTTTC
CCAAGATAAACTGTGGCGAGTGTTTGCGAACTTCCTTCGCCCAGGCGACA
TCCTACTGGGAGAAACAGGCACGGCTGGATATGGTGTCCGCGAGATGGCG
TTTCCCAAGCACACCCGCCTTTTCGCACCCGTGACCTGGCTATCTATCGG
GTATATGCTACCAGGAGCACAGGGAGCCGCACTTGCGCAAGAAGAATTGA
TGGCATCAGACAACTACCACGGCATTAAAGATGCACGCACAGTCCTTCTC
ATCGGCGATGGCAGTTTTCAAATGACCGCGCAGGAATTATCAACAATCAT
TCGACTCAAGCTGAACGTCGTGGTCTTCCTCATCAACAACGACGGATACA
CGATCGAGCGCTGCATCCATGGCCGGAAACAGGGATACAACGATGTGTCG
CGATGGAGATATCTACAGGCCCCCAGCTTCTTTGGAGCGAGTGAAGACAC
GTACACTGCCTCAGTTAGAACCTGGAAGGAGCTACAAGATGTTTTCTCGA
ATGATGTTGTCAGTAATGGGAAAGAGCTGCGGATGGTTGAGATAATGCTA
GACCGTGAGGACGCTCCTATTGGACCTTTGTCGATGCTTATAGATCAGCA
AAGACGTACCGGCGCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016831carboxy-lyase activity
GO:0000287magnesium ion binding
GO:0030976thiamine pyrophosphate binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005947CBS51388_005947Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005947-T1.exon1CBS51388_005947-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005947-T1.cdsCBS51388_005947-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005947-T1CBS51388_005947-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029035
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR012001
DBxrefInterPro:IPR011766
DBxrefInterPro:IPR012110
DBxrefInterPro:IPR012000
DBxrefPFAM:PF02776
DBxrefPFAM:PF00205
DBxrefPFAM:PF02775
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:214291..216009 +
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