|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:230962..232954- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005954-T1 ID=CBS51388_005954-T1|Name=CBS51388_005954-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1993bp|location=Sequence derived from alignment at An09:230962..232954- (Aspergillus niger CBS 513.88)
ATGTCCAGCCCCGTTGACGATTCCAATACCCATCTGGGTCCTCCTCGACG
CGACACCGACCCCTCCAGTGATGACGACCGTCTGGGTAACCGATCGACCA
ACAATGACGAACGACCGTTGACCCGCGAAAACCCTCCTCCGCCCTCCGGG
GGTAACCAGTGGGGCGTGCTCTTCAAAGCCATCCGCGATGGCACTTCACA
ACTCGCGGAAAAACTTGGTCGTGATCCTGACGGCGGTGATGGACTGGATT
CGGCCTGGCACCCAGAAGACTACGGATTCCAAGAGGACATTGAGATGAGA
GAGATGCTCGCACAGGAGGAACTCGAGGAGCATGCCTACGCTTCCAAGCT
GCAGTCCGTGCTGGGTTCCGATGCCAACAATCTTGTGAAGAACCTGGGCT
TGGGTGAAACTCCGTCGCGGACCAACAGTAATGATGAGAACCTCGTCGGA
GGTGTGCTCTGGCATTTACTCAGTCATCAGATGGGCCATAACCCGGAGGA
AATCCATGACGATGGTGCGGTGCCCACATCTACAGAAGACGGACTGGCGC
CGTTACCCACTGACCTGCGGAAGCGTCGCAAGAAGAAGTGGTACGACGAG
GATCCAACGAATGACAAAGAAGGTCGGAAGAAAATGAAGGAAGAGCTGTT
GACACAGAAGATTGGTTCGCTTCTCACCCGCCAGCGCTATATGATCCAGC
TGTGTCGGGCATTGATGAAATTCGGCGCTCCGACGCATCGTCTCGAAGAA
TACATGCAGATGACGGCTTACCGACTGCGGGTACAGGGCCAATTCATGTA
CATTCCCGGCTGCATGATTATTTCGTTTGACGATCCCCTTACCCGCACTG
CGGAGGTCAAGCTGGTCCGCACAACCCACGGATTGGACCTTGGTCGACTC
GGGGATATTCACAATTGCTATAAGAATGTGCTTCATGGCAGACTGTCGCC
GGATGAGGCTCTTCCAGTCATGGACGATCTTCTTACCCGAAAGAGTCGCA
TTCATCAGGCCTGGTTGTTGGTTTTGCTGTCCGGCCTGGCGAGTGTGGCG
GTGGGTCCGTGGGCGTTCAGCGCGCGCCCGGTCGACATGCCCATTATCTT
CGTCCTGGGCTGTCTCCTCGGAACATTACAGTATGTGTTGGCACCACGAT
CGGCGCTGTACTCCAATGTGTTCGAAGTCACCGTGGCCATGCTCACGTCC
TTACTTGGCTCGTGCATTTGGAAGCATTTACTACTCGAGCGGCGAGCCTG
TTTTCTGTTTCTCCGCCCTGGCAGAATCATCCATCGCGCTCATCCTACCG
GGATACTCTGTGCTGTGTAGCAGTCTGGAATTGCAATCGCATCAGATCGT
GGCAGGATCCATCCGATTGGTCTATACTATCATTTACTCGCTTTTCCTGG
GCTACGGCGTGACAGTGGGTCTCACGATCTACGGACTGATGGACGATAAT
GCCACCAAAGCCACATCCTGCCCTTCACGAGATACCAACATCTATGGCAG
TGTGTACGTGCAGGAATTCGTGTTCGTGGCGGTGTACTGCGCCTTTGCCG
CCATCCTCAACCAGGCCAAATGGAAGCAGCTGCCGATCATGTCCTTCATG
GGCGTCGCAGGCTACACGACCTACTACTTCACAGCCAATCACTTGGACAG
TCGGTTCGGCAGTACCATTGGAGCTTTCACGATCGGATTGTGTGCCAACT
TGTACAGTCGAGTCTGGCATGGACACGCTGCTGCGGCCATCGTGCCGGGC
ATGTGGACGCTGGTGTCGTCTGGTCTGGCTAGTAGTGGATCCATCATCTC
CGGATTGGCGTACGCAGAAGCAGTGAAAAATAATACCGTTTCAGATTCGA
CAATGACCCAGACGCAGGAGTCATTGGGAGGGTTGGCTTTGAGTATGGTG
CAGACGGCGTTGGGAATCACGGTAGGACTCTTTCTTTCCGCGATGGTGGT
CTATCCTGGTGGAAAACGCAAGGGTGGACTGTTCAATCTGTGA back to topCoding sequence (CDS) from alignment at An09:230962..232954- >CBS51388_005954-T1 ID=CBS51388_005954-T1|Name=CBS51388_005954-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3738bp|location=Sequence derived from alignment at An09:230962..232954- (Aspergillus niger CBS 513.88)
CAGTCTGGAATTGCAATCGCATCAGATCGTGGCAGGATCCATCCGATTGG
TCTATACTATCATTTACTCGCTTTTCCTGGGCTACGGCGTGACAGTGGGT
CTCACGATCTACGGACTGATGGACGATAATGCCACCAAAGCCACATCCTG
CCCTTCACGAGATACCAACATCTATGGCAGTGTGTACGTGCAGGAATTCG
TGTTCGTGGCGGTGTACTGCGCCTTTGCCGCCATCCTCAACCAGGCCAAA
TGGAAGCAGCTGCCGATCATGTCCTTCATGGGCGTCGCAGGCTACACGAC
CTACTACTTCACAGCCAATCACTTGGACAGTCGGTTCGGCAGTACCATTG
GAGCTTTCACGATCGGATTGTGTGCCAACTTGTACAGTCGAGTCTGGCAT
GGACACGCTGCTGCGGCCATCGTGCCGGGCATGTGGACGCTGGTGTCGTC
TGGTCTGGCTAGTAGTGGATCCATCATCTCCGGATTGGCGTACGCAGAAG
CAGTGAAAAATAATACCGTTTCAGATTCGACAATGACCCAGACGCAGGAG
TCATTGGGAGGGTTGGCTTTGAGTATGGTGCAGACGGCGTTGGGAATCAC
GGTAGGACTCTTTCTTTCCGCGATGGTGGTCTATCCTGGTGGAAAACGCA
AGGGTGGACTGTTCAATCTGTGAATGTCCAGCCCCGTTGACGATTCCAAT
ACCCATCTGGGTCCTCCTCGACGCGACACCGACCCCTCCAGTGATGACGA
CCGTCTGGGTAACCGATCGACCAACAATGACGAACGACCGTTGACCCGCG
AAAACCCTCCTCCGCCCTCCGGGGGTAACCAGTGGGGCGTGCTCTTCAAA
GCCATCCGCGATGGCACTTCACAACTCGCGGAAAAACTTGGTCGTGATCC
TGACGGCGGTGATGGACTGGATTCGGCCTGGCACCCAGAAGACTACGGAT
TCCAAGAGGACATTGAGATGAGAGAGATGCTCGCACAGGAGGAACTCGAG
GAGCATGCCTACGCTTCCAAGCTGCAGTCCGTGCTGGGTTCCGATGCCAA
CAATCTTGTGAAGAACCTGGGCTTGGGTGAAACTCCGTCGCGGACCAACA
GTAATGATGAGAACCTCGTCGGAGGTGTGCTCTGGCATTTACTCAGTCAT
CAGATGGGCCATAACCCGGAGGAAATCCATGACGATGGTGCGGTGCCCAC
ATCTACAGAAGACGGACTGGCGCCGTTACCCACTGACCTGCGGAAGCGTC
GCAAGAAGAAGTGGTACGACGAGGATCCAACGAATGACAAAGAAGGTCGG
AAGAAAATGAAGGAAGAGCTGTTGACACAGAAGATTGGTTCGCTTCTCAC
CCGCCAGCGCTATATGATCCAGCTGTGTCGGGCATTGATGAAATTCGGCG
CTCCGACGCATCGTCTCGAAGAATACATGCAGATGACGGCTTACCGACTG
CGGGTACAGGGCCAATTCATGTACATTCCCGGCTGCATGATTATTTCGTT
TGACGATCCCCTTACCCGCACTGCGGAGGTCAAGCTGGTCCGCACAACCC
ACGGATTGGACCTTGGTCGACTCGGGGATATTCACAATTGCTATAAGAAT
GTGCTTCATGGCAGACTGTCGCCGGATGAGGCTCTTCCAGTCATGGACGA
TCTTCTTACCCGAAAGAGTCGCATTCATCAGGCCTGGTTGTTGGTTTTGC
TGTCCGGCCTGGCGAGTGTGGCGGTGGGTCCGTGGGCGTTCAGCGCGCGC
CCGGTCGACATGCCCATTATCTTCGTCCTGGGCTGTCTCCTCGGAACATT
ACAGTATGTGTTGGCACCACGATCGGCGCTGTACTCCAATGTGTTCGAAG
TCACCGTGGCCATGCTCACCAGTCTGGAATTGCAATCGCATCAGATCGTG
GCAGGATCCATCCGATTGGTCTATACTATCATTTACTCGCTTTTCCTGGG
CTACGGCGTGACAGTGGGTCTCACGATCTACGGACTGATGGACGATAATG
CCACCAAAGCCACATCCTGCCCTTCACGAGATACCAACATCTATGGCAGT
GTGTACGTGCAGGAATTCGTGTTCGTGGCGGTGTACTGCGCCTTTGCCGC
CATCCTCAACCAGGCCAAATGGAAGCAGCTGCCGATCATGTCCTTCATGG
GCGTCGCAGGCTACACGACCTACTACTTCACAGCCAATCACTTGGACAGT
CGGTTCGGCAGTACCATTGGAGCTTTCACGATCGGATTGTGTGCCAACTT
GTACAGTCGAGTCTGGCATGGACACGCTGCTGCGGCCATCGTGCCGGGCA
TGTGGACGCTGGTGTCGTCTGGTCTGGCTAGTAGTGGATCCATCATCTCC
GGATTGGCGTACGCAGAAGCAGTGAAAAATAATACCGTTTCAGATTCGAC
AATGACCCAGACGCAGGAGTCATTGGGAGGGTTGGCTTTGAGTATGGTGC
AGACGGCGTTGGGAATCACGGTAGGACTCTTTCTTTCCGCGATGGTGGTC
TATCCTGGTGGAAAACGCAAGGGTGGACTGTTCAATCTGTGAATGTCCAG
CCCCGTTGACGATTCCAATACCCATCTGGGTCCTCCTCGACGCGACACCG
ACCCCTCCAGTGATGACGACCGTCTGGGTAACCGATCGACCAACAATGAC
GAACGACCGTTGACCCGCGAAAACCCTCCTCCGCCCTCCGGGGGTAACCA
GTGGGGCGTGCTCTTCAAAGCCATCCGCGATGGCACTTCACAACTCGCGG
AAAAACTTGGTCGTGATCCTGACGGCGGTGATGGACTGGATTCGGCCTGG
CACCCAGAAGACTACGGATTCCAAGAGGACATTGAGATGAGAGAGATGCT
CGCACAGGAGGAACTCGAGGAGCATGCCTACGCTTCCAAGCTGCAGTCCG
TGCTGGGTTCCGATGCCAACAATCTTGTGAAGAACCTGGGCTTGGGTGAA
ACTCCGTCGCGGACCAACAGTAATGATGAGAACCTCGTCGGAGGTGTGCT
CTGGCATTTACTCAGTCATCAGATGGGCCATAACCCGGAGGAAATCCATG
ACGATGGTGCGGTGCCCACATCTACAGAAGACGGACTGGCGCCGTTACCC
ACTGACCTGCGGAAGCGTCGCAAGAAGAAGTGGTACGACGAGGATCCAAC
GAATGACAAAGAAGGTCGGAAGAAAATGAAGGAAGAGCTGTTGACACAGA
AGATTGGTTCGCTTCTCACCCGCCAGCGCTATATGATCCAGCTGTGTCGG
GCATTGATGAAATTCGGCGCTCCGACGCATCGTCTCGAAGAATACATGCA
GATGACGGCTTACCGACTGCGGGTACAGGGCCAATTCATGTACATTCCCG
GCTGCATGATTATTTCGTTTGACGATCCCCTTACCCGCACTGCGGAGGTC
AAGCTGGTCCGCACAACCCACGGATTGGACCTTGGTCGACTCGGGGATAT
TCACAATTGCTATAAGAATGTGCTTCATGGCAGACTGTCGCCGGATGAGG
CTCTTCCAGTCATGGACGATCTTCTTACCCGAAAGAGTCGCATTCATCAG
GCCTGGTTGTTGGTTTTGCTGTCCGGCCTGGCGAGTGTGGCGGTGGGTCC
GTGGGCGTTCAGCGCGCGCCCGGTCGACATGCCCATTATCTTCGTCCTGG
GCTGTCTCCTCGGAACATTACAGTATGTGTTGGCACCACGATCGGCGCTG
TACTCCAATGTGTTCGAAGTCACCGTGGCCATGCTCAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010619 |
| DBxref | InterPro:IPR024528 |
| DBxref | PFAM:PF12821 |
| DBxref | PFAM:PF06738 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:230962..232954 - |
|
