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CBS51388_005958-T1, CBS51388_005958-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005958-T1
Unique NameCBS51388_005958-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:237855..239015-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005958-T1 ID=CBS51388_005958-T1|Name=CBS51388_005958-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1161bp|location=Sequence derived from alignment at An09:237855..239015- (Aspergillus niger CBS 513.88)
ATGCAGTCCATTCTACAACCCATCCTCGGTCCTCATAAGGAGATCCATGA
TCTCACTGGCCGTGTCGCCCTCATCACTGGCGGTGCACTAGGCATAGGGT
CAGTTTTCTGCCACAGTATATCCAGATAGCAACTAATTCGGGCTTGCAGG
TACGAGATTGCCCGCGCGTTCGTTCTCAATGGCGCCAAGGTATACATGAC
CAACCGCAAAGAAGAACAAGGCCAAGCTGCGATCGAACAAATCAAGAAAG
AAGCCGGCGAGAATGCGCAGATCGAGTGGTTCCCCTGCGACATGGGGAAC
TTGAATGAAATCAAGGAAGTGTTTGAAGACTTCCGGAAGAAGGAAGATCG
ACTAGATCTTGTGCGTTCCCCACACAATATCCCTCGAAGCTGTCAAAACT
GACATGGGCGGCAGCTTATTCTCTCGGCTGGAATCAACGTCAACCAATAC
GGTGAAACACACGACCACATCGATCGCCATTTCGAAGTCAACTGGCTGGG
CCAATTCTATGTCGTGAACCTGGTCTACCCGTTGCTGAGAAAGACGTCCA
AGTTACCGAATACCCCTGCGCCCAGAATCGTCTTCGAGACCTCAGAGCAG
CATCGCATGGCGCCTAAGAATGTTCATTTCGCTACGCTAGAGGAGATCAA
CAACCCCGAGGTCGGCAACCTGGAGCTTTACGGTCGGACGAAGTTGGCCA
TTATTCTTGGCGTGAAGTACGGACTGTTGGATCGGGTAATCAAGCCTAAC
AATGACAACATCTACGCGCTGTCTGTGCATCCAGGCGCTGTAAGTTATAT
TCCCACTGTCCCTTTCTCGAGACAGCCGTGCTAACACGATGCTCAGGTAA
ACACAGCAATGCAACAACAATGGAAGGACGCATATCCCGGCCTCTTGGGC
AAGCTTCTAACCACAGTAATGCTGGCAGCCGGTCGAACACCCGAGCACGG
CTCCTTCAGCGCACTGTATGCGGCGACAAGTCCCGAAGTTGAAGAGAAGG
GTTGGAACGGATACTACTTCAGTGACCCTGCACAGCCCGGAAAGGAGTCT
GCGCAGGCGTCAGATCCTTCGTTGGGTGCTGCATTATGGGACCTCAGTCA
CCGGATCATCAAGGAGAAGGTTGGCGATGATGCCATTGTCGACTGGAATG
CCAGTGCTTGA
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Coding sequence (CDS) from alignment at An09:237855..239015-

>CBS51388_005958-T1 ID=CBS51388_005958-T1|Name=CBS51388_005958-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3996bp|location=Sequence derived from alignment at An09:237855..239015- (Aspergillus niger CBS 513.88)
GTAAACACAGCAATGCAACAACAATGGAAGGACGCATATCCCGGCCTCTT
GGGCAAGCTTCTAACCACAGTAATGCTGGCAGCCGGTCGAACACCCGAGC
ACGGCTCCTTCAGCGCACTGTATGCGGCGACAAGTCCCGAAGTTGAAGAG
AAGGGTTGGAACGGATACTACTTCAGTGACCCTGCACAGCCCGGAAAGGA
GTCTGCGCAGGCGTCAGATCCTTCGTTGGGTGCTGCATTATGGGACCTCA
GTCACCGGATCATCAAGGAGAAGGTTGGCGATGATGCCATTGTCGACTGG
AATGCCAGTGCTTGACTTATTCTCTCGGCTGGAATCAACGTCAACCAATA
CGGTGAAACACACGACCACATCGATCGCCATTTCGAAGTCAACTGGCTGG
GCCAATTCTATGTCGTGAACCTGGTCTACCCGTTGCTGAGAAAGACGTCC
AAGTTACCGAATACCCCTGCGCCCAGAATCGTCTTCGAGACCTCAGAGCA
GCATCGCATGGCGCCTAAGAATGTTCATTTCGCTACGCTAGAGGAGATCA
ACAACCCCGAGGTCGGCAACCTGGAGCTTTACGGTCGGACGAAGTTGGCC
ATTATTCTTGGCGTGAAGTACGGACTGTTGGATCGGGTAATCAAGCCTAA
CAATGACAACATCTACGCGCTGTCTGTGCATCCAGGCGCTGTACGAGATT
GCCCGCGCGTTCGTTCTCAATGGCGCCAAGGTATACATGACCAACCGCAA
AGAAGAACAAGGCCAAGCTGCGATCGAACAAATCAAGAAAGAAGCCGGCG
AGAATGCGCAGATCGAGTGGTTCCCCTGCGACATGGGGAACTTGAATGAA
ATCAAGGAAGTGTTTGAAGACTTCCGGAAGAAGGAAGATCGACTAGATCT
TATGCAGTCCATTCTACAACCCATCCTCGGTCCTCATAAGGAGATCCATG
ATCTCACTGGCCGTGTCGCCCTCATCACTGGCGGTGCACTAGGCATAGGG
TAAACACAGCAATGCAACAACAATGGAAGGACGCATATCCCGGCCTCTTG
GGCAAGCTTCTAACCACAGTAATGCTGGCAGCCGGTCGAACACCCGAGCA
CGGCTCCTTCAGCGCACTGTATGCGGCGACAAGTCCCGAAGTTGAAGAGA
AGGGTTGGAACGGATACTACTTCAGTGACCCTGCACAGCCCGGAAAGGAG
TCTGCGCAGGCGTCAGATCCTTCGTTGGGTGCTGCATTATGGGACCTCAG
TCACCGGATCATCAAGGAGAAGGTTGGCGATGATGCCATTGTCGACTGGA
ATGCCAGTGCTTGACTTATTCTCTCGGCTGGAATCAACGTCAACCAATAC
GGTGAAACACACGACCACATCGATCGCCATTTCGAAGTCAACTGGCTGGG
CCAATTCTATGTCGTGAACCTGGTCTACCCGTTGCTGAGAAAGACGTCCA
AGTTACCGAATACCCCTGCGCCCAGAATCGTCTTCGAGACCTCAGAGCAG
CATCGCATGGCGCCTAAGAATGTTCATTTCGCTACGCTAGAGGAGATCAA
CAACCCCGAGGTCGGCAACCTGGAGCTTTACGGTCGGACGAAGTTGGCCA
TTATTCTTGGCGTGAAGTACGGACTGTTGGATCGGGTAATCAAGCCTAAC
AATGACAACATCTACGCGCTGTCTGTGCATCCAGGCGCTGTACGAGATTG
CCCGCGCGTTCGTTCTCAATGGCGCCAAGGTATACATGACCAACCGCAAA
GAAGAACAAGGCCAAGCTGCGATCGAACAAATCAAGAAAGAAGCCGGCGA
GAATGCGCAGATCGAGTGGTTCCCCTGCGACATGGGGAACTTGAATGAAA
TCAAGGAAGTGTTTGAAGACTTCCGGAAGAAGGAAGATCGACTAGATCTT
ATGCAGTCCATTCTACAACCCATCCTCGGTCCTCATAAGGAGATCCATGA
TCTCACTGGCCGTGTCGCCCTCATCACTGGCGGTGCACTAGGCATAGGGT
AAACACAGCAATGCAACAACAATGGAAGGACGCATATCCCGGCCTCTTGG
GCAAGCTTCTAACCACAGTAATGCTGGCAGCCGGTCGAACACCCGAGCAC
GGCTCCTTCAGCGCACTGTATGCGGCGACAAGTCCCGAAGTTGAAGAGAA
GGGTTGGAACGGATACTACTTCAGTGACCCTGCACAGCCCGGAAAGGAGT
CTGCGCAGGCGTCAGATCCTTCGTTGGGTGCTGCATTATGGGACCTCAGT
CACCGGATCATCAAGGAGAAGGTTGGCGATGATGCCATTGTCGACTGGAA
TGCCAGTGCTTGACTTATTCTCTCGGCTGGAATCAACGTCAACCAATACG
GTGAAACACACGACCACATCGATCGCCATTTCGAAGTCAACTGGCTGGGC
CAATTCTATGTCGTGAACCTGGTCTACCCGTTGCTGAGAAAGACGTCCAA
GTTACCGAATACCCCTGCGCCCAGAATCGTCTTCGAGACCTCAGAGCAGC
ATCGCATGGCGCCTAAGAATGTTCATTTCGCTACGCTAGAGGAGATCAAC
AACCCCGAGGTCGGCAACCTGGAGCTTTACGGTCGGACGAAGTTGGCCAT
TATTCTTGGCGTGAAGTACGGACTGTTGGATCGGGTAATCAAGCCTAACA
ATGACAACATCTACGCGCTGTCTGTGCATCCAGGCGCTGTACGAGATTGC
CCGCGCGTTCGTTCTCAATGGCGCCAAGGTATACATGACCAACCGCAAAG
AAGAACAAGGCCAAGCTGCGATCGAACAAATCAAGAAAGAAGCCGGCGAG
AATGCGCAGATCGAGTGGTTCCCCTGCGACATGGGGAACTTGAATGAAAT
CAAGGAAGTGTTTGAAGACTTCCGGAAGAAGGAAGATCGACTAGATCTTA
TGCAGTCCATTCTACAACCCATCCTCGGTCCTCATAAGGAGATCCATGAT
CTCACTGGCCGTGTCGCCCTCATCACTGGCGGTGCACTAGGCATAGGGTA
AACACAGCAATGCAACAACAATGGAAGGACGCATATCCCGGCCTCTTGGG
CAAGCTTCTAACCACAGTAATGCTGGCAGCCGGTCGAACACCCGAGCACG
GCTCCTTCAGCGCACTGTATGCGGCGACAAGTCCCGAAGTTGAAGAGAAG
GGTTGGAACGGATACTACTTCAGTGACCCTGCACAGCCCGGAAAGGAGTC
TGCGCAGGCGTCAGATCCTTCGTTGGGTGCTGCATTATGGGACCTCAGTC
ACCGGATCATCAAGGAGAAGGTTGGCGATGATGCCATTGTCGACTGGAAT
GCCAGTGCTTGACTTATTCTCTCGGCTGGAATCAACGTCAACCAATACGG
TGAAACACACGACCACATCGATCGCCATTTCGAAGTCAACTGGCTGGGCC
AATTCTATGTCGTGAACCTGGTCTACCCGTTGCTGAGAAAGACGTCCAAG
TTACCGAATACCCCTGCGCCCAGAATCGTCTTCGAGACCTCAGAGCAGCA
TCGCATGGCGCCTAAGAATGTTCATTTCGCTACGCTAGAGGAGATCAACA
ACCCCGAGGTCGGCAACCTGGAGCTTTACGGTCGGACGAAGTTGGCCATT
ATTCTTGGCGTGAAGTACGGACTGTTGGATCGGGTAATCAAGCCTAACAA
TGACAACATCTACGCGCTGTCTGTGCATCCAGGCGCTGTACGAGATTGCC
CGCGCGTTCGTTCTCAATGGCGCCAAGGTATACATGACCAACCGCAAAGA
AGAACAAGGCCAAGCTGCGATCGAACAAATCAAGAAAGAAGCCGGCGAGA
ATGCGCAGATCGAGTGGTTCCCCTGCGACATGGGGAACTTGAATGAAATC
AAGGAAGTGTTTGAAGACTTCCGGAAGAAGGAAGATCGACTAGATCTTAT
GCAGTCCATTCTACAACCCATCCTCGGTCCTCATAAGGAGATCCATGATC
TCACTGGCCGTGTCGCCCTCATCACTGGCGGTGCACTAGGCATAGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005958CBS51388_005958Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005958-T1CBS51388_005958-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005958-T1.cdsCBS51388_005958-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005958-T1.exon4CBS51388_005958-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_005958-T1.exon3CBS51388_005958-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_005958-T1.exon2CBS51388_005958-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005958-T1.exon1CBS51388_005958-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:237855..239015 -
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