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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:276553..277493+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005973-T1 ID=CBS51388_005973-T1|Name=CBS51388_005973-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=941bp|location=Sequence derived from alignment at An09:276553..277493+ (Aspergillus niger CBS 513.88)
ATGGCACTGCATCTGCAGGTTTGGCCACCGCTTGTTGGCCCCTTCGCCAA
GATTAGGAGCTGATTTGCCTTTCATAGGACCGAACATTCGAGCATATGAC
ACCGGACGAATGGGATAGTGGACTAGCCCCAAAAGTGGCCGGTACCTGGA
ATCTACACACTGCAACACAGGGCGTGGATCTGTCCTTCTTTGTCATGTTT
GGTTCCATCGCGGGTTCCGCTGGGTCCCTCGGCCAGGCTAACTACGCTGC
TTCGAACACATTTTTGACCGGGCTAGCCAAGTATCGGAGACAGCGTGGCT
TGGCAGCGTCGGTCTTAAACCTGGGTCCTGTCGAGGATGTAGGTATTATC
AGTAAACGTGCGGACTTTGCTCAGACCACGAGCGTGGCCTTGGCTCAACC
TATAAGTGAACAGGCTGTTCTTGAGTCATTTCAAGTGAGTATTGAAGACT
CTCATCCTAACTCACAATGTTCGGGAGTATTGGATATTGGTATTGCGGAC
AAGACAGGTAAGAATGAGGGCTCTTCGCTCATGCGATTATGGGGGCGCGA
TGCCCGGTTTGCTATGCACAGCAACTTAGCGCAGGCGTCGCTGGATGAGG
GAATAGACGGACCTGAGCATCGGCTTCGCGAGTTCCTTAACCATGTTCAT
CAAGACCCTTCGTTGCTGAATAAGGCTGAAGCGATTACCGAGTTCAAACG
GAACATGGCTCACCTTATTTCTGGGACAATTGCGGGTGGGCGAAAATTCA
CTGATGAAGAGGCGGCCGGTTTCGCAATTGACTCCCTTGTGGCTATAGAG
ATGAGAAGCTGGGTACGGAGAGCTATCCATCTCGACGTCTCACTCTCTGA
AATTACAAAGGCTGGTACTTTGGGCTCACTGGCCGAACATATCGTCAAAC
TCCTGAGGTTGCAGTATAAGTTGGGTAATGTGGGTGAGTGA back to topCoding sequence (CDS) from alignment at An09:276553..277493+ >CBS51388_005973-T1 ID=CBS51388_005973-T1|Name=CBS51388_005973-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1764bp|location=Sequence derived from alignment at An09:276553..277493+ (Aspergillus niger CBS 513.88)
ATGGCACTGCATCTGCAGGACCGAACATTCGAGCATATGACACCGGACGA
ATGGGATAGTGGACTAGCCCCAAAAGTGGCCGGTACCTGGAATCTACACA
CTGCAACACAGGGCGTGGATCTGTCCTTCTTTGTCATGTTTGGTTCCATC
GCGGGTTCCGCTGGGTCCCTCGGCCAGGCTAACTACGCTGCTTCGAACAC
ATTTTTGACCGGGCTAGCCAAGTATCGGAGACAGCGTGGCTTGGCAGCGT
CGGTCTTAAACCTGGGTCCTGTCGAGGATGTAGGTATTATCAGTAAACGT
GCGGACTTTGCTCAGACCACGAGCGTGGCCTTGGCTCAACCTATAAGTGA
ACAGGCTGTTCTTGAGTCATTTCAAGTGAGTATTGAAGACTCTCATCCTA
ACTCACAATGTTCGGGAGTATTGGATATTGGTATTGCGGACAAGACAGGT
AAGAATGAGGGCTCTTCGCTCATGCGATTATGGGGGCGCGATGCCCGGTT
TGCTATGCACAGCAACTTAGCGCAGGCGTCGCTGGATGAGGGAATAGACG
GACCTGAGCATCGGCTTCGCGAGTTCCTTAACCATGTTCATCAAGACCCT
TCGTTGCTGAATAAGGCTGAAGCGATTACCGAGTTCAAACGGAACATGGC
TCACCTTATTTCTGGGACAATTGCGGGTGGGCGAAAATTCACTGATGAAG
AGGCGGCCGGTTTCGCAATTGACTCCCTTGTGGCTATAGAGATGAGAAGC
TGGGTACGGAGAGCTATCCATCTCGACGTCTCACTCTCTGAAATTACAAA
GGCTGGTACTTTGGGCTCACTGGCCGAACATATCGTCAAACTCCTGAGGT
TGCAGTATAAGTTGGGTAATGTGGGTGAGTGAATGGCACTGCATCTGCAG
GACCGAACATTCGAGCATATGACACCGGACGAATGGGATAGTGGACTAGC
CCCAAAAGTGGCCGGTACCTGGAATCTACACACTGCAACACAGGGCGTGG
ATCTGTCCTTCTTTGTCATGTTTGGTTCCATCGCGGGTTCCGCTGGGTCC
CTCGGCCAGGCTAACTACGCTGCTTCGAACACATTTTTGACCGGGCTAGC
CAAGTATCGGAGACAGCGTGGCTTGGCAGCGTCGGTCTTAAACCTGGGTC
CTGTCGAGGATGTAGGTATTATCAGTAAACGTGCGGACTTTGCTCAGACC
ACGAGCGTGGCCTTGGCTCAACCTATAAGTGAACAGGCTGTTCTTGAGTC
ATTTCAAGTGAGTATTGAAGACTCTCATCCTAACTCACAATGTTCGGGAG
TATTGGATATTGGTATTGCGGACAAGACAGGTAAGAATGAGGGCTCTTCG
CTCATGCGATTATGGGGGCGCGATGCCCGGTTTGCTATGCACAGCAACTT
AGCGCAGGCGTCGCTGGATGAGGGAATAGACGGACCTGAGCATCGGCTTC
GCGAGTTCCTTAACCATGTTCATCAAGACCCTTCGTTGCTGAATAAGGCT
GAAGCGATTACCGAGTTCAAACGGAACATGGCTCACCTTATTTCTGGGAC
AATTGCGGGTGGGCGAAAATTCACTGATGAAGAGGCGGCCGGTTTCGCAA
TTGACTCCCTTGTGGCTATAGAGATGAGAAGCTGGGTACGGAGAGCTATC
CATCTCGACGTCTCACTCTCTGAAATTACAAAGGCTGGTACTTTGGGCTC
ACTGGCCGAACATATCGTCAAACTCCTGAGGTTGCAGTATAAGTTGGGTA
ATGTGGGTGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0031177 | phosphopantetheine binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_9.2 |
| DBxref | InterPro:IPR036736 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR013968 |
| DBxref | InterPro:IPR009081 |
| DBxref | InterPro:IPR020806 |
| DBxref | PFAM:PF00550 |
| DBxref | PFAM:PF08659 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:276553..277493 + |
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