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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:280253..282579- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005975-T1 ID=CBS51388_005975-T1|Name=CBS51388_005975-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2327bp|location=Sequence derived from alignment at An09:280253..282579- (Aspergillus niger CBS 513.88)
ATGCAGGGACAAAGAGCCGAACGAGGCCCCAGGGGCAAATATGCTCGTTT
AATCTGCCGGGGCTGTCGAGCTCGCAAAATCAAATGCGTGTTGCCTTCCT
CCGCGGCATCATTAGGCCCACTGGGCACTCCACAGCCCCCGGCAACAAGC
TGTGAGAGATGCCGCAATCTCGATCTGGAATGCATTATCGAGAACACTCC
TCTAGGACGTCCAGCAGCGAAACGCGCAAATCGCGGAAATGTGGCTAGCA
AATCGCCCCAGTCAGACCCATCCAAATCCCCGCGTCAAGGCCGCCACGAT
GACGAGAAAGCAGCCAAGCTCTCGGACTCGATCCAGCAGTATCTTTTCTC
GGGCGCGATAGACGAAAAGCCCATGCTGCAACGATCGCAAGATGCAACAG
ATCCTGCATCTGACGACGATGGACTGTACCATGCTATGGCAAACACCAGC
ACTTTTATCGCGGGGGTCTTGGCTAAAAACACTACTTTTGGCTCCGACAT
TCAGCTGGTGTCCACCTGGAGCACCCCTCTTACAGATATAATCAGCCATG
ATCTCGCTGCCACACTTGATAACTTGTAAGATCGGGCGCAGAACTACGCT
GGTCTGATCAGCTGGCTAACACCGTTGGTAGATTAGTGTGGCAGCGTCTC
TTCGTTCTGGGCACACCAAGCCTGCTCCACTTGAGAGAGCGCTTGTTGTC
AACCGATTCCAATACCAATAATACCGCCACCAAGCTGCTTTTTGCAGTAC
TCTGCCTGGCCGCATGTGAAAGCTCAGAGGAAGTTCGCCGTCAGAATGGA
TCTCTCAAAGATAGTCTGCAGCAGGCTGTTTCGTCATACGGCCAGGATTT
TATCTTCAGTCCTCCGACACATATCGACTCTGTTGCTGTTTGTCGCTTTT
TGTCGGCTTTCAAACCAACCGCTTTGGCCATGTCAAAACGGACTGCAAAT
CAGTCCGTTAAAGCCGAGCTTTATATGGCTCTGGCTCACCGTATCGCAGA
GCGACTGAGGTTGTTGCCGGAGCCAGGGATCATGCCCTTTCTGGACACGA
CTTCCATCGACAGTGTGTTGATGGAGCGTGAGCTAATCATGTCAATCCAG
GGACTTGAGATAATAGCCGAGGAATTTTTGATGGGCGATTTTCTGACCAT
GACCATGCAAGGTTTCCGGCAGGTTCTCCAGCGGATGCAACCACATATTG
ACTCCTACCAGCTGCTCTTGGAGACACGGTCCTGTTCACCAGTCATAATC
TTCCATATCAAATCAATTACGGCTACGTTTATGCAGATTGAGGCAATGGC
GAATTCAAGGCAGTGCTGGATGAATCCCAGTCGGTTGTTCATCGTTGTCG
AAGAGGGCGAAAAGAAATGCCTCGCTGAAGTCAACTTTGTCTATCATTTA
CTCTCAGAGGCAGCCGGAGATGAACAGCAGAATGAGGTGATAATCATGTC
CTCACTGCTGGAGCTGCGCTTTCATGCAGTAATTGCCAAAATCTTTGGCC
TCGGGCTTTTCTACATATCTGTCTTTAAAGCAAGAGCTGAGGGCAATGGG
CCACCAAAGACCACGGAAATTCGCCGCGATGAAGCGAGCCAGATGGGTAA
CACCGTCATTAACTCCATAATGACAACTCCCGAATCTGAAAGGGACTCTC
AGTTTTACGCCTTCCTGCGTCATTTTGGAGGACGATATCCAGACAAGCTG
CAAGGGATCCTGGCTAAATTCATGGAGTGCGCATCAGTCAAGCTGGGTGG
CAACCCCTGCATTGTGCCGGTCCGACCAATAGTAATTGAGATTGTGAATC
TGTGTAAAAATATCGTGGAAAACAACCTGATCCGATTCAAGGCCTCCGGA
AAACTACATCCCAGCTTTGACAAACAACTCCACCTTTTCAAACAGTGCGC
CAATGCGCTGGTCGCCATGGTGTCCCATTCAGGAAACACTCCGGAGGCTG
CCTTTAGGAGCGGGTGTATATATTCCGCAAGCAGCAAAATGCTGGATGGT
CTGTGGGATTTGATGAAGAGTTTGGGATTTCAGGCTTCTCTCGTCAAAGG
CTGGGACGAGGCTCTGGGAGCCGTAAATATGTCTGAAACTATGTCTGAGC
CCTCCGCTATGCCACATATGCACTTCAATACCTTCGAAGCATGGAACCTG
TGGCCGTATCCGGCTATAATGCACCATGCTTCCCAACCACCGGACGTCTT
TGAGTGGAGTCAATCATCTACAGCGACTTGGTTCCCAAACCCAATGACTG
ATCTCCTCAGCACTGACGTGGGTTATCCGGGTACAACTGCTGGGTTCGAA
GGCAGCATGCCCCCGTTTGACGAATAA back to topCoding sequence (CDS) from alignment at An09:280253..282579- >CBS51388_005975-T1 ID=CBS51388_005975-T1|Name=CBS51388_005975-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4542bp|location=Sequence derived from alignment at An09:280253..282579- (Aspergillus niger CBS 513.88)
ATTAGTGTGGCAGCGTCTCTTCGTTCTGGGCACACCAAGCCTGCTCCACT
TGAGAGAGCGCTTGTTGTCAACCGATTCCAATACCAATAATACCGCCACC
AAGCTGCTTTTTGCAGTACTCTGCCTGGCCGCATGTGAAAGCTCAGAGGA
AGTTCGCCGTCAGAATGGATCTCTCAAAGATAGTCTGCAGCAGGCTGTTT
CGTCATACGGCCAGGATTTTATCTTCAGTCCTCCGACACATATCGACTCT
GTTGCTGTTTGTCGCTTTTTGTCGGCTTTCAAACCAACCGCTTTGGCCAT
GTCAAAACGGACTGCAAATCAGTCCGTTAAAGCCGAGCTTTATATGGCTC
TGGCTCACCGTATCGCAGAGCGACTGAGGTTGTTGCCGGAGCCAGGGATC
ATGCCCTTTCTGGACACGACTTCCATCGACAGTGTGTTGATGGAGCGTGA
GCTAATCATGTCAATCCAGGGACTTGAGATAATAGCCGAGGAATTTTTGA
TGGGCGATTTTCTGACCATGACCATGCAAGGTTTCCGGCAGGTTCTCCAG
CGGATGCAACCACATATTGACTCCTACCAGCTGCTCTTGGAGACACGGTC
CTGTTCACCAGTCATAATCTTCCATATCAAATCAATTACGGCTACGTTTA
TGCAGATTGAGGCAATGGCGAATTCAAGGCAGTGCTGGATGAATCCCAGT
CGGTTGTTCATCGTTGTCGAAGAGGGCGAAAAGAAATGCCTCGCTGAAGT
CAACTTTGTCTATCATTTACTCTCAGAGGCAGCCGGAGATGAACAGCAGA
ATGAGGTGATAATCATGTCCTCACTGCTGGAGCTGCGCTTTCATGCAGTA
ATTGCCAAAATCTTTGGCCTCGGGCTTTTCTACATATCTGTCTTTAAAGC
AAGAGCTGAGGGCAATGGGCCACCAAAGACCACGGAAATTCGCCGCGATG
AAGCGAGCCAGATGGGTAACACCGTCATTAACTCCATAATGACAACTCCC
GAATCTGAAAGGGACTCTCAGTTTTACGCCTTCCTGCGTCATTTTGGAGG
ACGATATCCAGACAAGCTGCAAGGGATCCTGGCTAAATTCATGGAGTGCG
CATCAGTCAAGCTGGGTGGCAACCCCTGCATTGTGCCGGTCCGACCAATA
GTAATTGAGATTGTGAATCTGTGTAAAAATATCGTGGAAAACAACCTGAT
CCGATTCAAGGCCTCCGGAAAACTACATCCCAGCTTTGACAAACAACTCC
ACCTTTTCAAACAGTGCGCCAATGCGCTGGTCGCCATGGTGTCCCATTCA
GGAAACACTCCGGAGGCTGCCTTTAGGAGCGGGTGTATATATTCCGCAAG
CAGCAAAATGCTGGATGGTCTGTGGGATTTGATGAAGAGTTTGGGATTTC
AGGCTTCTCTCGTCAAAGGCTGGGACGAGGCTCTGGGAGCCGTAAATATG
TCTGAAACTATGTCTGAGCCCTCCGCTATGCCACATATGCACTTCAATAC
CTTCGAAGCATGGAACCTGTGGCCGTATCCGGCTATAATGCACCATGCTT
CCCAACCACCGGACGTCTTTGAGTGGAGTCAATCATCTACAGCGACTTGG
TTCCCAAACCCAATGACTGATCTCCTCAGCACTGACGTGGGTTATCCGGG
TACAACTGCTGGGTTCGAAGGCAGCATGCCCCCGTTTGACGAATAAATGC
AGGGACAAAGAGCCGAACGAGGCCCCAGGGGCAAATATGCTCGTTTAATC
TGCCGGGGCTGTCGAGCTCGCAAAATCAAATGCGTGTTGCCTTCCTCCGC
GGCATCATTAGGCCCACTGGGCACTCCACAGCCCCCGGCAACAAGCTGTG
AGAGATGCCGCAATCTCGATCTGGAATGCATTATCGAGAACACTCCTCTA
GGACGTCCAGCAGCGAAACGCGCAAATCGCGGAAATGTGGCTAGCAAATC
GCCCCAGTCAGACCCATCCAAATCCCCGCGTCAAGGCCGCCACGATGACG
AGAAAGCAGCCAAGCTCTCGGACTCGATCCAGCAGTATCTTTTCTCGGGC
GCGATAGACGAAAAGCCCATGCTGCAACGATCGCAAGATGCAACAGATCC
TGCATCTGACGACGATGGACTGTACCATGCTATGGCAAACACCAGCACTT
TTATCGCGGGGGTCTTGGCTAAAAACACTACTTTTGGCTCCGACATTCAG
CTGGTGTCCACCTGGAGCACCCCTCTTACAGATATAATCAGCCATGATCT
CGCTGCCACACTTGATAACTTATTAGTGTGGCAGCGTCTCTTCGTTCTGG
GCACACCAAGCCTGCTCCACTTGAGAGAGCGCTTGTTGTCAACCGATTCC
AATACCAATAATACCGCCACCAAGCTGCTTTTTGCAGTACTCTGCCTGGC
CGCATGTGAAAGCTCAGAGGAAGTTCGCCGTCAGAATGGATCTCTCAAAG
ATAGTCTGCAGCAGGCTGTTTCGTCATACGGCCAGGATTTTATCTTCAGT
CCTCCGACACATATCGACTCTGTTGCTGTTTGTCGCTTTTTGTCGGCTTT
CAAACCAACCGCTTTGGCCATGTCAAAACGGACTGCAAATCAGTCCGTTA
AAGCCGAGCTTTATATGGCTCTGGCTCACCGTATCGCAGAGCGACTGAGG
TTGTTGCCGGAGCCAGGGATCATGCCCTTTCTGGACACGACTTCCATCGA
CAGTGTGTTGATGGAGCGTGAGCTAATCATGTCAATCCAGGGACTTGAGA
TAATAGCCGAGGAATTTTTGATGGGCGATTTTCTGACCATGACCATGCAA
GGTTTCCGGCAGGTTCTCCAGCGGATGCAACCACATATTGACTCCTACCA
GCTGCTCTTGGAGACACGGTCCTGTTCACCAGTCATAATCTTCCATATCA
AATCAATTACGGCTACGTTTATGCAGATTGAGGCAATGGCGAATTCAAGG
CAGTGCTGGATGAATCCCAGTCGGTTGTTCATCGTTGTCGAAGAGGGCGA
AAAGAAATGCCTCGCTGAAGTCAACTTTGTCTATCATTTACTCTCAGAGG
CAGCCGGAGATGAACAGCAGAATGAGGTGATAATCATGTCCTCACTGCTG
GAGCTGCGCTTTCATGCAGTAATTGCCAAAATCTTTGGCCTCGGGCTTTT
CTACATATCTGTCTTTAAAGCAAGAGCTGAGGGCAATGGGCCACCAAAGA
CCACGGAAATTCGCCGCGATGAAGCGAGCCAGATGGGTAACACCGTCATT
AACTCCATAATGACAACTCCCGAATCTGAAAGGGACTCTCAGTTTTACGC
CTTCCTGCGTCATTTTGGAGGACGATATCCAGACAAGCTGCAAGGGATCC
TGGCTAAATTCATGGAGTGCGCATCAGTCAAGCTGGGTGGCAACCCCTGC
ATTGTGCCGGTCCGACCAATAGTAATTGAGATTGTGAATCTGTGTAAAAA
TATCGTGGAAAACAACCTGATCCGATTCAAGGCCTCCGGAAAACTACATC
CCAGCTTTGACAAACAACTCCACCTTTTCAAACAGTGCGCCAATGCGCTG
GTCGCCATGGTGTCCCATTCAGGAAACACTCCGGAGGCTGCCTTTAGGAG
CGGGTGTATATATTCCGCAAGCAGCAAAATGCTGGATGGTCTGTGGGATT
TGATGAAGAGTTTGGGATTTCAGGCTTCTCTCGTCAAAGGCTGGGACGAG
GCTCTGGGAGCCGTAAATATGTCTGAAACTATGTCTGAGCCCTCCGCTAT
GCCACATATGCACTTCAATACCTTCGAAGCATGGAACCTGTGGCCGTATC
CGGCTATAATGCACCATGCTTCCCAACCACCGGACGTCTTTGAGTGGAGT
CAATCATCTACAGCGACTTGGTTCCCAAACCCAATGACTGATCTCCTCAG
CACTGACGTGGGTTATCCGGGTACAACTGCTGGGTTCGAAGGCAGCATGC
CCCCGTTTGACGAATAAATGCAGGGACAAAGAGCCGAACGAGGCCCCAGG
GGCAAATATGCTCGTTTAATCTGCCGGGGCTGTCGAGCTCGCAAAATCAA
ATGCGTGTTGCCTTCCTCCGCGGCATCATTAGGCCCACTGGGCACTCCAC
AGCCCCCGGCAACAAGCTGTGAGAGATGCCGCAATCTCGATCTGGAATGC
ATTATCGAGAACACTCCTCTAGGACGTCCAGCAGCGAAACGCGCAAATCG
CGGAAATGTGGCTAGCAAATCGCCCCAGTCAGACCCATCCAAATCCCCGC
GTCAAGGCCGCCACGATGACGAGAAAGCAGCCAAGCTCTCGGACTCGATC
CAGCAGTATCTTTTCTCGGGCGCGATAGACGAAAAGCCCATGCTGCAACG
ATCGCAAGATGCAACAGATCCTGCATCTGACGACGATGGACTGTACCATG
CTATGGCAAACACCAGCACTTTTATCGCGGGGGTCTTGGCTAAAAACACT
ACTTTTGGCTCCGACATTCAGCTGGTGTCCACCTGGAGCACCCCTCTTAC
AGATATAATCAGCCATGATCTCGCTGCCACACTTGATAACTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_9.2 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:280253..282579 - |
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