CBS51388_006018-T1, CBS51388_006018-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_006018-T1
Unique Name	CBS51388_006018-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An09:401932..403624-
coding sequence from alignment at An09:401932..403624-

mRNA from alignment at An09:401932..403624-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_006018-T1 ID=CBS51388_006018-T1|Name=CBS51388_006018-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1693bp|location=Sequence derived from alignment at An09:401932..403624- (Aspergillus niger CBS 513.88)
ATGTCAGACTCCCGAACCACAACCACCAAAAACAACACTACAAACCACAA
GACCTCGCGCCAGGGCCCTGGTTCGGCCTGTGAGGAATGCCGTCGCCGGA
AGCTACGGTGCGACCGCCAGCCGCAGTGTCAGAACTGCGTTGATGCTGGT
GTTTATTGTGTCACCAACCTTGCACGCCCCGCGCGTGGTCCAAAGAAGGG
TCATCTAAAGGCCTTGAAGGGCCGCATCGGTAGGGCCTTGAATTTCCTTC
CTGAGGATTGAGCTTGTTGCTGATTATGTCTCCTGGGAACAGCCACCCTC
GAGCGGTGTCTTCTGGAGCAGCGCGATGGCATGCTCGTTGATCCCATCTC
GGACGATGAGCTGCTGGATAAAGCGCTGTCCGCCTCTTCGCCAGCTTCCC
TGTCCCCGGACCCCCCTGAGGAAGTATCCGAAAACATTCTGGAAGACCTG
TATGTTTCACCTTCCCTTCCATTGCGAGATTGAAGTCATCCAGACTCACC
GGCTCAGGGACCAGGTGTTTTTCGAGCGCGTTCAGCCGATGGTCCCCATA
TTGCAACGCCATCGATACTTTTCCTGGGCACGGGAACCTCAGCAATCGGC
AAACCGACGGGGGCTGCAGCAGGCTATTCGCACGCTGGCCGCTGGCGTGA
GTAGCCAGTTGCCCGAGGTACGCGTAGCACTGTATCGGACCACGCGCCAC
ACACTGGAGTCCCTCGAGTCGGACGACACTTTGTTGACAGCCCCGGATTT
CGAGCAGGTGCAAGCGTGGATCCTCATCGCCATTTACGAGTTTATGCAGG
TCTCATATTCTCGCGGCTGGATGAGTGCCGGTCGTGTATTCCGACTAGTG
CAGCTGCTGCGCCTGCCGGAGATAGACGCTTCGCCTCTCCCGCTGCTCGA
CCTAGACCTAGACCCAGATTCCAACTGGGTGGTGGCCGAGGAGAAACGAC
GCACCGTGTGGATGGCCTACATAATGGACTGTTCCCTAAATTTACGCCAT
AAGGGCTCTCTCACCCTGACGGAGCAAGCGCTGACCCGACTCCCCATGCC
CGAGAGTGAATTCCAATGTGGTCACCCTATTTCAATGGGTTTTTTGGCCG
AAGCACTCGCGGGTACGGATATTACCAGTCCCCTATCCTCCTTTGCTAAA
TGTATCCTGCTAGCCACTATCAGTGGCCGCACTCTGTCACACCGCCATCT
ATCTATGGCTGAGCTCCTCCGAGGAAATCCGCTTCAGGATATCTGGACTC
GCCATCAGTGGATCGACACGACGCTCACAGCCCACCTGCAGCTGTGCTTC
CCGCTTCCCACAGCCGCGGAATCCAGCGACCCTATGCTCCTGTTTGCCAA
GATGATCGGGCAAGCCGGTGTCCTCTCCCTGTATGACATCCTCCAGTCCA
CGCCCTGGGAGCCCGAAACAGTCAGCCTCCTACCCGACTACGAGGCATGC
GCGCTCCACGCGGTCCGCGAGACCGTCGCTCTAGCACGTAATCTACGCCA
TTTCAGCTGCTTCAAGGTGCATCCCTTCACTCCTATTCTACTAGGTCTAT
GTGCAGAGGTATTGCAGCACCCTGTTGCCCGTAATGATACCCCAAAGCTA
TTAGGGGAGGTGCAGGACGCCTTGAAATATTTGAAGACCGTGAATCGATT
GGCTCGACAGGAAGCAGCAGCTCAGGATATCCGCCGGTCGTGA

Coding sequence (CDS) from alignment at An09:401932..403624-

>CBS51388_006018-T1 ID=CBS51388_006018-T1|Name=CBS51388_006018-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4716bp|location=Sequence derived from alignment at An09:401932..403624- (Aspergillus niger CBS 513.88)
GGACCAGGTGTTTTTCGAGCGCGTTCAGCCGATGGTCCCCATATTGCAAC
GCCATCGATACTTTTCCTGGGCACGGGAACCTCAGCAATCGGCAAACCGA
CGGGGGCTGCAGCAGGCTATTCGCACGCTGGCCGCTGGCGTGAGTAGCCA
GTTGCCCGAGGTACGCGTAGCACTGTATCGGACCACGCGCCACACACTGG
AGTCCCTCGAGTCGGACGACACTTTGTTGACAGCCCCGGATTTCGAGCAG
GTGCAAGCGTGGATCCTCATCGCCATTTACGAGTTTATGCAGGTCTCATA
TTCTCGCGGCTGGATGAGTGCCGGTCGTGTATTCCGACTAGTGCAGCTGC
TGCGCCTGCCGGAGATAGACGCTTCGCCTCTCCCGCTGCTCGACCTAGAC
CTAGACCCAGATTCCAACTGGGTGGTGGCCGAGGAGAAACGACGCACCGT
GTGGATGGCCTACATAATGGACTGTTCCCTAAATTTACGCCATAAGGGCT
CTCTCACCCTGACGGAGCAAGCGCTGACCCGACTCCCCATGCCCGAGAGT
GAATTCCAATGTGGTCACCCTATTTCAATGGGTTTTTTGGCCGAAGCACT
CGCGGGTACGGATATTACCAGTCCCCTATCCTCCTTTGCTAAATGTATCC
TGCTAGCCACTATCAGTGGCCGCACTCTGTCACACCGCCATCTATCTATG
GCTGAGCTCCTCCGAGGAAATCCGCTTCAGGATATCTGGACTCGCCATCA
GTGGATCGACACGACGCTCACAGCCCACCTGCAGCTGTGCTTCCCGCTTC
CCACAGCCGCGGAATCCAGCGACCCTATGCTCCTGTTTGCCAAGATGATC
GGGCAAGCCGGTGTCCTCTCCCTGTATGACATCCTCCAGTCCACGCCCTG
GGAGCCCGAAACAGTCAGCCTCCTACCCGACTACGAGGCATGCGCGCTCC
ACGCGGTCCGCGAGACCGTCGCTCTAGCACGTAATCTACGCCATTTCAGC
TGCTTCAAGGTGCATCCCTTCACTCCTATTCTACTAGGTCTATGTGCAGA
GGTATTGCAGCACCCTGTTGCCCGTAATGATACCCCAAAGCTATTAGGGG
AGGTGCAGGACGCCTTGAAATATTTGAAGACCGTGAATCGATTGGCTCGA
CAGGAAGCAGCAGCTCAGGATATCCGCCGGTCGTGACCACCCTCGAGCGG
TGTCTTCTGGAGCAGCGCGATGGCATGCTCGTTGATCCCATCTCGGACGA
TGAGCTGCTGGATAAAGCGCTGTCCGCCTCTTCGCCAGCTTCCCTGTCCC
CGGACCCCCCTGAGGAAGTATCCGAAAACATTCTGGAAGACCTATGTCAG
ACTCCCGAACCACAACCACCAAAAACAACACTACAAACCACAAGACCTCG
CGCCAGGGCCCTGGTTCGGCCTGTGAGGAATGCCGTCGCCGGAAGCTACG
GTGCGACCGCCAGCCGCAGTGTCAGAACTGCGTTGATGCTGGTGTTTATT
GTGTCACCAACCTTGCACGCCCCGCGCGTGGTCCAAAGAAGGGTCATCTA
AAGGCCTTGAAGGGCCGCATCGGGACCAGGTGTTTTTCGAGCGCGTTCAG
CCGATGGTCCCCATATTGCAACGCCATCGATACTTTTCCTGGGCACGGGA
ACCTCAGCAATCGGCAAACCGACGGGGGCTGCAGCAGGCTATTCGCACGC
TGGCCGCTGGCGTGAGTAGCCAGTTGCCCGAGGTACGCGTAGCACTGTAT
CGGACCACGCGCCACACACTGGAGTCCCTCGAGTCGGACGACACTTTGTT
GACAGCCCCGGATTTCGAGCAGGTGCAAGCGTGGATCCTCATCGCCATTT
ACGAGTTTATGCAGGTCTCATATTCTCGCGGCTGGATGAGTGCCGGTCGT
GTATTCCGACTAGTGCAGCTGCTGCGCCTGCCGGAGATAGACGCTTCGCC
TCTCCCGCTGCTCGACCTAGACCTAGACCCAGATTCCAACTGGGTGGTGG
CCGAGGAGAAACGACGCACCGTGTGGATGGCCTACATAATGGACTGTTCC
CTAAATTTACGCCATAAGGGCTCTCTCACCCTGACGGAGCAAGCGCTGAC
CCGACTCCCCATGCCCGAGAGTGAATTCCAATGTGGTCACCCTATTTCAA
TGGGTTTTTTGGCCGAAGCACTCGCGGGTACGGATATTACCAGTCCCCTA
TCCTCCTTTGCTAAATGTATCCTGCTAGCCACTATCAGTGGCCGCACTCT
GTCACACCGCCATCTATCTATGGCTGAGCTCCTCCGAGGAAATCCGCTTC
AGGATATCTGGACTCGCCATCAGTGGATCGACACGACGCTCACAGCCCAC
CTGCAGCTGTGCTTCCCGCTTCCCACAGCCGCGGAATCCAGCGACCCTAT
GCTCCTGTTTGCCAAGATGATCGGGCAAGCCGGTGTCCTCTCCCTGTATG
ACATCCTCCAGTCCACGCCCTGGGAGCCCGAAACAGTCAGCCTCCTACCC
GACTACGAGGCATGCGCGCTCCACGCGGTCCGCGAGACCGTCGCTCTAGC
ACGTAATCTACGCCATTTCAGCTGCTTCAAGGTGCATCCCTTCACTCCTA
TTCTACTAGGTCTATGTGCAGAGGTATTGCAGCACCCTGTTGCCCGTAAT
GATACCCCAAAGCTATTAGGGGAGGTGCAGGACGCCTTGAAATATTTGAA
GACCGTGAATCGATTGGCTCGACAGGAAGCAGCAGCTCAGGATATCCGCC
GGTCGTGACCACCCTCGAGCGGTGTCTTCTGGAGCAGCGCGATGGCATGC
TCGTTGATCCCATCTCGGACGATGAGCTGCTGGATAAAGCGCTGTCCGCC
TCTTCGCCAGCTTCCCTGTCCCCGGACCCCCCTGAGGAAGTATCCGAAAA
CATTCTGGAAGACCTATGTCAGACTCCCGAACCACAACCACCAAAAACAA
CACTACAAACCACAAGACCTCGCGCCAGGGCCCTGGTTCGGCCTGTGAGG
AATGCCGTCGCCGGAAGCTACGGTGCGACCGCCAGCCGCAGTGTCAGAAC
TGCGTTGATGCTGGTGTTTATTGTGTCACCAACCTTGCACGCCCCGCGCG
TGGTCCAAAGAAGGGTCATCTAAAGGCCTTGAAGGGCCGCATCGGGACCA
GGTGTTTTTCGAGCGCGTTCAGCCGATGGTCCCCATATTGCAACGCCATC
GATACTTTTCCTGGGCACGGGAACCTCAGCAATCGGCAAACCGACGGGGG
CTGCAGCAGGCTATTCGCACGCTGGCCGCTGGCGTGAGTAGCCAGTTGCC
CGAGGTACGCGTAGCACTGTATCGGACCACGCGCCACACACTGGAGTCCC
TCGAGTCGGACGACACTTTGTTGACAGCCCCGGATTTCGAGCAGGTGCAA
GCGTGGATCCTCATCGCCATTTACGAGTTTATGCAGGTCTCATATTCTCG
CGGCTGGATGAGTGCCGGTCGTGTATTCCGACTAGTGCAGCTGCTGCGCC
TGCCGGAGATAGACGCTTCGCCTCTCCCGCTGCTCGACCTAGACCTAGAC
CCAGATTCCAACTGGGTGGTGGCCGAGGAGAAACGACGCACCGTGTGGAT
GGCCTACATAATGGACTGTTCCCTAAATTTACGCCATAAGGGCTCTCTCA
CCCTGACGGAGCAAGCGCTGACCCGACTCCCCATGCCCGAGAGTGAATTC
CAATGTGGTCACCCTATTTCAATGGGTTTTTTGGCCGAAGCACTCGCGGG
TACGGATATTACCAGTCCCCTATCCTCCTTTGCTAAATGTATCCTGCTAG
CCACTATCAGTGGCCGCACTCTGTCACACCGCCATCTATCTATGGCTGAG
CTCCTCCGAGGAAATCCGCTTCAGGATATCTGGACTCGCCATCAGTGGAT
CGACACGACGCTCACAGCCCACCTGCAGCTGTGCTTCCCGCTTCCCACAG
CCGCGGAATCCAGCGACCCTATGCTCCTGTTTGCCAAGATGATCGGGCAA
GCCGGTGTCCTCTCCCTGTATGACATCCTCCAGTCCACGCCCTGGGAGCC
CGAAACAGTCAGCCTCCTACCCGACTACGAGGCATGCGCGCTCCACGCGG
TCCGCGAGACCGTCGCTCTAGCACGTAATCTACGCCATTTCAGCTGCTTC
AAGGTGCATCCCTTCACTCCTATTCTACTAGGTCTATGTGCAGAGGTATT
GCAGCACCCTGTTGCCCGTAATGATACCCCAAAGCTATTAGGGGAGGTGC
AGGACGCCTTGAAATATTTGAAGACCGTGAATCGATTGGCTCGACAGGAA
GCAGCAGCTCAGGATATCCGCCGGTCGTGACCACCCTCGAGCGGTGTCTT
CTGGAGCAGCGCGATGGCATGCTCGTTGATCCCATCTCGGACGATGAGCT
GCTGGATAAAGCGCTGTCCGCCTCTTCGCCAGCTTCCCTGTCCCCGGACC
CCCCTGAGGAAGTATCCGAAAACATTCTGGAAGACCTATGTCAGACTCCC
GAACCACAACCACCAAAAACAACACTACAAACCACAAGACCTCGCGCCAG
GGCCCTGGTTCGGCCTGTGAGGAATGCCGTCGCCGGAAGCTACGGTGCGA
CCGCCAGCCGCAGTGTCAGAACTGCGTTGATGCTGGTGTTTATTGTGTCA
CCAACCTTGCACGCCCCGCGCGTGGTCCAAAGAAGGGTCATCTAAAGGCC
TTGAAGGGCCGCATCG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0042025	host cell nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006351	transcription, DNA-templated
GO:0006355	regulation of transcription, DNA-templated

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CBS51388_006018	CBS51388_006018	Aspergillus niger CBS 513.88	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_006018-T1	CBS51388_006018-T1-protein	Aspergillus niger CBS 513.88	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_006018-T1.cds	CBS51388_006018-T1.cds	Aspergillus niger CBS 513.88	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_006018-T1.exon3	CBS51388_006018-T1.exon3	Aspergillus niger CBS 513.88	exon
CBS51388_006018-T1.exon2	CBS51388_006018-T1.exon2	Aspergillus niger CBS 513.88	exon
CBS51388_006018-T1.exon1	CBS51388_006018-T1.exon1	Aspergillus niger CBS 513.88	exon

Properties


Property Name	Value
Note	antiSMASH:Cluster_9.4
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR007219
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
DBxref	PFAM:PF04082
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An09	supercontig	An09:401932..403624 -

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CBS51388_006018-T1, CBS51388_006018-T1 (mRNA) Aspergillus niger CBS 513.88