You are here

Home

CBS51388_006045-T1, CBS51388_006045-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006045-T1
Unique NameCBS51388_006045-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:485588..486025-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006045-T1 ID=CBS51388_006045-T1|Name=CBS51388_006045-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=438bp|location=Sequence derived from alignment at An09:485588..486025- (Aspergillus niger CBS 513.88)
ATGTCTCATCTTCAGTATTACGCATACCCTGGTTATGGCACTCGCAGCCA
AACGGACCTTTACTACAGCCAGGCAGTTAAAGTAGGGGATCGCATCGAGT
GCTCCGGTCAAGGTTTGTAACTCATATGTTCCATCCCAGTCCTGTTATAA
TCCTATGACATCGATGGATTATTAACCCTAAAACTAGGTGGATGGGATCC
TTCGACCTTAAAGATCAACCCCGAAATCAACGCTCAAATTGACCAGGCTT
TTGCGAATGTCGAGCTTACCCTGAAAACAGCGGGTGGTCAAGGATGGAGT
CAAGTGTATCGCGTTAACTCTTACCACCTTCCTCTCAACGATGAGGCGTT
GAACGCAATGGTTCGGAATTTGAGAAAGTATATGCCCAACCACCAACCTA
TGGACGTGTATTGGCGTGTCGCGGTTGGCTTACGATGA
back to top

Coding sequence (CDS) from alignment at An09:485588..486025-

>CBS51388_006045-T1 ID=CBS51388_006045-T1|Name=CBS51388_006045-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=726bp|location=Sequence derived from alignment at An09:485588..486025- (Aspergillus niger CBS 513.88)
GTGGATGGGATCCTTCGACCTTAAAGATCAACCCCGAAATCAACGCTCAA
ATTGACCAGGCTTTTGCGAATGTCGAGCTTACCCTGAAAACAGCGGGTGG
TCAAGGATGGAGTCAAGTGTATCGCGTTAACTCTTACCACCTTCCTCTCA
ACGATGAGGCGTTGAACGCAATGGTTCGGAATTTGAGAAAGTATATGCCC
AACCACCAACCTATGGACGTGTATTGGCGTGTCGCGGTTGGCTTACGATG
AATGTCTCATCTTCAGTATTACGCATACCCTGGTTATGGCACTCGCAGCC
AAACGGACCTTTACTACAGCCAGGCAGTTAAAGTAGGGGATCGCATCGAG
TGCTCCGGTCAAGGTGGATGGGATCCTTCGACCTTAAAGATCAACCCCGA
AATCAACGCTCAAATTGACCAGGCTTTTGCGAATGTCGAGCTTACCCTGA
AAACAGCGGGTGGTCAAGGATGGAGTCAAGTGTATCGCGTTAACTCTTAC
CACCTTCCTCTCAACGATGAGGCGTTGAACGCAATGGTTCGGAATTTGAG
AAAGTATATGCCCAACCACCAACCTATGGACGTGTATTGGCGTGTCGCGG
TTGGCTTACGATGAATGTCTCATCTTCAGTATTACGCATACCCTGGTTAT
GGCACTCGCAGCCAAACGGACCTTTACTACAGCCAGGCAGTTAAAGTAGG
GGATCGCATCGAGTGCTCCGGTCAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006045CBS51388_006045Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006045-T1CBS51388_006045-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006045-T1.cdsCBS51388_006045-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006045-T1.exon2CBS51388_006045-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006045-T1.exon1CBS51388_006045-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR006175
DBxrefInterPro:IPR035959
DBxrefPFAM:PF01042
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:485588..486025 -
Powered by Drupal