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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:486755..488569- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006046-T1 ID=CBS51388_006046-T1|Name=CBS51388_006046-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1815bp|location=Sequence derived from alignment at An09:486755..488569- (Aspergillus niger CBS 513.88)
ATGCTCCTTGCTCGCCTCTGGCCGGCGTGCCTCACGCTGCTCGTGGCCGG
GGCCGCCGCCGTTAAGGTCAATCCTTTACCAGCTCCGCGCAACATTTCTT
GGACTTCTTCGGGTCCTAAGCAGCTGGCAAGCTTTGTCAGTCTCCGTGCA
TCGCAAGATACCCCTGACTTCATTCTCGCCAATGGATGGAATCGCGCATG
GGATTCTATTGTCTCCTTACAATGGGTACCCGCAGCGACCGAAGGCCCCA
TGTCATCCTATCAGCCTTTTCCCACCGCGACGGCCGCGGCCGGGGTCACT
AAACGGTCCTCGCAGGCACTGCCATCGCTGCAGTTTGTTGATGTGAATGT
GGCTGATCTTGACGCGGATCTGCAGCATGGAGTTGACGAGTCTTACACAC
TGGAGGTCACCGAGAGCGCTACTTCAGTCGTCATCGAGGCACCCACTGTC
TGGGGAGCACTCCATGCCTTTACTACTCTCCAGCAGCTGGTCATCTCTGA
CGGACAGGGCGGCTTGATAATCGAGCAGTCAGTTAAGATCCAGGATGCGC
CGCTCTATCCTTACCGGGGTATCATGCTTGATACTGGTCGAAATTTTATC
TCAGTTAGCAAGATCTATGAGCAGCTGGACGGCATGTCGCTTTCTAAGCT
CAATGTTCTACACTGGCACATGGAAGACACCCAATCGTGGCCAGTGCAGA
TTGATGCCTATCCAGAGATGATCCATGATGCCTACTCCCCGCGCGAGGTA
TATTCACACGCCGATATGCGCAACATCGTAGCGTATGCCCGAGCACGCGG
CGTACGGGTCATTCCTGAGATTGATATGCCCAGCCATTCCGCTTCTGGAT
GGAAACAGGTTGACCCCCAGATGGTCACCTGCGTGGATTCCTGGTGGTCT
AATGATGATTATGCCTTGCATACCGCGGTAGAACCCCCACCTGGTCAAAT
GGACATCATTTACAACGGCACATATGATGTGGTCCGAGAGGTATATAATG
AGCTGTCCGGTATCTTCCCGGACAACTGGTTCCATGTTGGAGCGGATGAG
ATTCAGCCTAACTGCTTTAACTTCAGCAGCTACGTCACCCAGTGGTTCGC
AGAGGATCCGTCGCGCACTTACAATGATCTGGCCCAGTACTGGGTAGACC
ATGCTGTACCGATCTTCCAGAACTACAGTTCCTCGCGGCAGCTGGTTATG
TGGGAAGATATCGTGCTATCTACGGAACATGCGCATGATGTACCCACAAA
TATCGTGATGCAAACCTGGAACAACGGGCTGGATTACATCAATCAGCTGA
CTGCCAAAGGCTACGATGTGATTGTGTCATCATCGGACTTCATGTATCTG
GACTGTGGGATGGGTGGCTTCCTAACCAATGATCCCCGATACGATGTAAT
GAGCAATCCAGATCCAAACACTCCCAACTTCAACTATGGCGGCAACGGAG
GCTCGTGGTGTGCGCCGTACAAGACGTGGCAGCGTATCTACGACTATGAC
TTCACGCAAAATCTGACTGACGCCCAGGCCCAGCACATCGTGGGCGCGGA
GGCACCCCTCTGGTCGGAACAAGTAGATGATGTGACTGTCTCCAGTCTGT
TCTGGCCGCGCGCCGCTGCTCTGGCAGAGCTGGTATGGTCTGGGAATCGG
GATGAGAATGGACATAAGCGCACGACGCTGATGACGCAGCGTATTTTGAA
CTTTCGCGAGTACTTGGTGGCCAATGGGGTGCAGGCGAAAGCGCTGGTTC
CTAAATACTGTGTGCAGCGCCCACATACCTGCGACTTGTATCGCAACCAG
AGTGTAATTCAGTAA back to topCoding sequence (CDS) from alignment at An09:486755..488569- >CBS51388_006046-T1 ID=CBS51388_006046-T1|Name=CBS51388_006046-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1815bp|location=Sequence derived from alignment at An09:486755..488569- (Aspergillus niger CBS 513.88)
ATGCTCCTTGCTCGCCTCTGGCCGGCGTGCCTCACGCTGCTCGTGGCCGG
GGCCGCCGCCGTTAAGGTCAATCCTTTACCAGCTCCGCGCAACATTTCTT
GGACTTCTTCGGGTCCTAAGCAGCTGGCAAGCTTTGTCAGTCTCCGTGCA
TCGCAAGATACCCCTGACTTCATTCTCGCCAATGGATGGAATCGCGCATG
GGATTCTATTGTCTCCTTACAATGGGTACCCGCAGCGACCGAAGGCCCCA
TGTCATCCTATCAGCCTTTTCCCACCGCGACGGCCGCGGCCGGGGTCACT
AAACGGTCCTCGCAGGCACTGCCATCGCTGCAGTTTGTTGATGTGAATGT
GGCTGATCTTGACGCGGATCTGCAGCATGGAGTTGACGAGTCTTACACAC
TGGAGGTCACCGAGAGCGCTACTTCAGTCGTCATCGAGGCACCCACTGTC
TGGGGAGCACTCCATGCCTTTACTACTCTCCAGCAGCTGGTCATCTCTGA
CGGACAGGGCGGCTTGATAATCGAGCAGTCAGTTAAGATCCAGGATGCGC
CGCTCTATCCTTACCGGGGTATCATGCTTGATACTGGTCGAAATTTTATC
TCAGTTAGCAAGATCTATGAGCAGCTGGACGGCATGTCGCTTTCTAAGCT
CAATGTTCTACACTGGCACATGGAAGACACCCAATCGTGGCCAGTGCAGA
TTGATGCCTATCCAGAGATGATCCATGATGCCTACTCCCCGCGCGAGGTA
TATTCACACGCCGATATGCGCAACATCGTAGCGTATGCCCGAGCACGCGG
CGTACGGGTCATTCCTGAGATTGATATGCCCAGCCATTCCGCTTCTGGAT
GGAAACAGGTTGACCCCCAGATGGTCACCTGCGTGGATTCCTGGTGGTCT
AATGATGATTATGCCTTGCATACCGCGGTAGAACCCCCACCTGGTCAAAT
GGACATCATTTACAACGGCACATATGATGTGGTCCGAGAGGTATATAATG
AGCTGTCCGGTATCTTCCCGGACAACTGGTTCCATGTTGGAGCGGATGAG
ATTCAGCCTAACTGCTTTAACTTCAGCAGCTACGTCACCCAGTGGTTCGC
AGAGGATCCGTCGCGCACTTACAATGATCTGGCCCAGTACTGGGTAGACC
ATGCTGTACCGATCTTCCAGAACTACAGTTCCTCGCGGCAGCTGGTTATG
TGGGAAGATATCGTGCTATCTACGGAACATGCGCATGATGTACCCACAAA
TATCGTGATGCAAACCTGGAACAACGGGCTGGATTACATCAATCAGCTGA
CTGCCAAAGGCTACGATGTGATTGTGTCATCATCGGACTTCATGTATCTG
GACTGTGGGATGGGTGGCTTCCTAACCAATGATCCCCGATACGATGTAAT
GAGCAATCCAGATCCAAACACTCCCAACTTCAACTATGGCGGCAACGGAG
GCTCGTGGTGTGCGCCGTACAAGACGTGGCAGCGTATCTACGACTATGAC
TTCACGCAAAATCTGACTGACGCCCAGGCCCAGCACATCGTGGGCGCGGA
GGCACCCCTCTGGTCGGAACAAGTAGATGATGTGACTGTCTCCAGTCTGT
TCTGGCCGCGCGCCGCTGCTCTGGCAGAGCTGGTATGGTCTGGGAATCGG
GATGAGAATGGACATAAGCGCACGACGCTGATGACGCAGCGTATTTTGAA
CTTTCGCGAGTACTTGGTGGCCAATGGGGTGCAGGCGAAAGCGCTGGTTC
CTAAATACTGTGTGCAGCGCCCACATACCTGCGACTTGTATCGCAACCAG
AGTGTAATTCAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004563 | beta-N-acetylhexosaminidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| Note | CAZy:GH20 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR015883 |
| DBxref | InterPro:IPR029018 |
| DBxref | InterPro:IPR029019 |
| DBxref | InterPro:IPR025705 |
| DBxref | PFAM:PF00728 |
| DBxref | PFAM:PF14845 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:486755..488569 - |
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