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CBS51388_006047-T1, CBS51388_006047-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006047-T1
Unique NameCBS51388_006047-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:489636..493274+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006047-T1 ID=CBS51388_006047-T1|Name=CBS51388_006047-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3639bp|location=Sequence derived from alignment at An09:489636..493274+ (Aspergillus niger CBS 513.88)
ATGAATATTCATGACGCTGATGAGCGCCCGTTGAAGAAGAGGCGCTTTTT
CGTGGATGATGAAGATCTCGCCACTCCCCAACCATCCACTGATTCTGTCA
CAGCAAGTCTCCACACGCCCGATTCCTCGTCCCTGGCCGGTCAAGAGTCC
CAGCCACAGCCTACACGATCTCAAAATGGCCTGGAAGATACAAAAGAACT
GTTGATGGATGATTCTACGCGGGTCGAGGATCATGCTGTGCCACATGTGG
AGCAAGAGATCGTGCAAGCGGAACACCACAATGCAGATTCGAGGACAGAG
GGTGCCCTACTACAGGTGGACTACGACGGGTTCGATATATCGACGTTCAC
AAGTATCATAGGGGAAAACCTCTCGGCAGATTCAATACAAAGAATCCGAA
GTGCTGCTGGTGACGACCTTGAACGGGCGGTCAACATCTACTTCGATGGC
TCTTGGAAGAAATCCCCAACTCCTCGTGCTCAGAATCAGACTACTCTTAC
GGCTCGCCAACGCCCGCTTCCTACACAACCCCATAAGATTGCTACTCCCC
TGTCAGCAACCTGTAAACCACACACCCAGATCCTACCGCCTGACAAGATC
ACATCTCGCCCTGCGACTCAGCCTCCCTTAAGATACATAGGTGCGTTTGG
TGTTGGAGCCTGGGCTACAAGGAGTGGAGCTGGATTCCTCAGACATGGGG
ATCTTGTAAATATTGAGCGTACACGGTCCCAGCCGCTCTCGAAGCGGAAC
CGTGCCGGGAAGCTGGTTTCTAATCAGAAGAGTGACGTTCTCACCCGGTT
TACCACTAAATCAGGGCAGGAAATAGGAAGATTGCCCCGGGAAACAGCTG
AATGGGTCTCAACCCTGCTGGATCAAAGGGTGTGTACATTTGAGGGTGTA
TGCGTATACGTGCCGGACCGGGTCCGGGTGAATGACACCATCTATCTGCA
GCTGCGATGCTACTTACGCATCGAGGCATTCCAGCCACGGATATTTAGTC
AATCGATGGATGACAATAGGTCCGTTGCAATCTTCGAGGAGAAAGAAAGT
GCAGATGAGAAAGCACTGCGGCTCCGCCAAGTGGCTCTTGTGAAGCTGTT
TGATGAAATCCATCTTCAACCGACATCCGTCAATGACATGACGAGAAATC
ATAAGAAAGAAGGGTTGCTTCGTGCGGCGGAAATGGCTGAACAGCACGAG
CGAGTGAAAAAGGAAAATCAAACAAATGACGACTCTTCGGAGGAGGACAG
CCCTGAGCTTGAAGAGGATCAGCTTGATACCCTCTATAAGAAGGCTCAGT
CGTTCGACTTTAGCATGCCTGAAGCAGAACCTGCCTCGTCATTTACATTG
CATCTTCGAAAATATCAGAGGCAGGCACTATACTGGATGCTCGCAAAGGA
AAAGGACAATAAGTCTGCAAGGGAGACGTCGCTGCATCCCTTATGGGAGG
AGTACAGTTGGCCGTCCAGGGATGTCGACGACAAAGAACTCCCAGCTGTG
GCTGGCATTGACCACTTTTACGTCAACCCTTACTCTGGCGAACTTAGCCT
TGACTTCCCTGTCCAAGAGCAGCATTGCCTTGGGGGGATCCTGGCAGATG
AAATGGGCCTGGGTAAGACGATTGAGATGCTCAGTTTGGTCCACTCTCAT
CGCATTATGCCTCAGAAGCCCACTGATCTTGTGAGGTTGCCTCAGTCGGC
TTCCGGTGTCGTACCCGCCCCATATACCACTCTTGTGATTGCGCCCACAT
CCCTCCTTTCGCAGTGGGAAAGTGAAGCACTGAAGGCTTCGCAGCCGGGA
ACAATGAACGTCCTCATGTATTACGGGGCGGACAAGAATATCAATCTTAA
AAACCTCTGCGCTTCGGGAAATGCTGCTGCTCCCAATTTAATCATAACCA
GCTATGGCGTTGTTCTCTCGGAATACCGTCAGCACATGTCCGCGTTGCTC
TCATCTATGAGCTCCGGTGGCCTATTTTCCGTGGACTTCTTCCGAGTTAT
CGTCGATGAAGCTCATGTAATCAAGAACCGTCTGTCAAAGACAGCCAAGG
CGTGCTATGAGCTCAAGGCAACCCATCGTTGGGTGTTGACAGGAACTCCC
ATCGTTAATCGCCTGGAGGACCTGTTCAGCCTTGTGAGATTTCTCAAGGT
CGAGCCATGGAATAACTTCTCATTTTGGAAGACATTTATAACTGTACCTT
TTGAGTCCAAAGACTATGTGCGCGCCCTGAACGTTGTGCAGAGCGTGCTG
GAGCCCCTGGTCCTCCGACGTACGAAGACAATGAAGACACCCGAGGGTGA
ACCTTTAGTGCCTTTACCACGTCGCACCATCACAATAGAGGAAGTCGAAC
TTCCAGACCAGGAGCGGGAGATTTATGATCTTATCTTTACACGGGCAAAG
CAGACGTTCAATCACAATGTCGAAGCTGGCACTCTGTTGAAGTCCTATTC
AACAATCTTCGCACAAATTCTCCGCCTCCGCCAGACCTGCTGTCATCCTA
TCCTCACACGCAACAAAGCGATAGTTGCAGACGAGGAAGATGCAGCAGCG
GCTGCTGACGCAGCCAACGACCTCAAGGACGACATGGATCTTCAAGATCT
CATTGATCGCTTCAAGGCATCCACCGAAGCAGCCGAATCCAACGAGCCTC
AGGATCCCTCCGCCAAATTCACTGCCCATGCATTGAAACAAATCCAAAAC
GAAGCCAGCGGCGAATGTCCCATTTGCTCGGAAGAGCCCATGATTGACCC
TGCCGTAACGGCATGCTGGCACAGTGCATGCAAGAAATGTCTGGAGGACT
ACATCCGCCACCAAACCGACAAGGGCATGGACCCTCGGTGCTTTTCATGC
CGAGCACCCACCACGTCGCGGGACATTTTCGAAGTGGTTCGTCATGAAAG
CCCCAATACCACACCCGAAGACGATATATATAGCAGTACTCCAACCCCCT
CTCAAGCGCCTCCCCGAATAAGCCTCCGCCGTATCCACCCTCTTTCGCCG
TCTGCCCATACATCTGCCAAAGTGCATGCCCTTCTCGCTCATCTTGCCCG
CGTCCCTGCCAATACCAAATCCGTTGTCTTTTCCCAATTTACCAGTTTCC
TCGACCTCATTTCCCCCCAACTCACCCGTGCGGGTATCCATCACGTCCGT
CTGGATGGTACCATGCCGCACAAAGCCCGTGCGGAAACCCTCGCGCAATT
CAACCGGGTCGAAACCTTTGCCGACCAAAATGAAATTGACAACGATGTCG
ACGCCAACGATTCCACCCAGCTTCCCCTCTCCAGGGCAAAGCACAGACAC
TCGACCGCCCCGCCCCCTCCCACCGTTCTTCTTATCAGTCTCCGCGCCGG
AGGTGTGGGTCTTAATCTCACGGCAGCTAGTAATGTCTTCATGATGGATC
CTTGGTGGAGCTTTGCAATTGAGGCTCAGGCTATTGATCGGGTTCATCGC
ATGGGACAGACACGGGATGTGCAAGTGACACGGTTCGTGGTGAAGGACTC
CATCGAGGGAAGAATGTTGAGGGTTCAGGAACGGAAGATGAATATTGCAG
GGTCTTTAGGACTGAGGGTTGGTGGAGATGGCTCCGAGGATGACAAGAAG
AAGGAAAGAATCGAGGAGTTGAGGTTGTTATTTGAATAG
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Coding sequence (CDS) from alignment at An09:489636..493274+

>CBS51388_006047-T1 ID=CBS51388_006047-T1|Name=CBS51388_006047-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3639bp|location=Sequence derived from alignment at An09:489636..493274+ (Aspergillus niger CBS 513.88)
ATGAATATTCATGACGCTGATGAGCGCCCGTTGAAGAAGAGGCGCTTTTT
CGTGGATGATGAAGATCTCGCCACTCCCCAACCATCCACTGATTCTGTCA
CAGCAAGTCTCCACACGCCCGATTCCTCGTCCCTGGCCGGTCAAGAGTCC
CAGCCACAGCCTACACGATCTCAAAATGGCCTGGAAGATACAAAAGAACT
GTTGATGGATGATTCTACGCGGGTCGAGGATCATGCTGTGCCACATGTGG
AGCAAGAGATCGTGCAAGCGGAACACCACAATGCAGATTCGAGGACAGAG
GGTGCCCTACTACAGGTGGACTACGACGGGTTCGATATATCGACGTTCAC
AAGTATCATAGGGGAAAACCTCTCGGCAGATTCAATACAAAGAATCCGAA
GTGCTGCTGGTGACGACCTTGAACGGGCGGTCAACATCTACTTCGATGGC
TCTTGGAAGAAATCCCCAACTCCTCGTGCTCAGAATCAGACTACTCTTAC
GGCTCGCCAACGCCCGCTTCCTACACAACCCCATAAGATTGCTACTCCCC
TGTCAGCAACCTGTAAACCACACACCCAGATCCTACCGCCTGACAAGATC
ACATCTCGCCCTGCGACTCAGCCTCCCTTAAGATACATAGGTGCGTTTGG
TGTTGGAGCCTGGGCTACAAGGAGTGGAGCTGGATTCCTCAGACATGGGG
ATCTTGTAAATATTGAGCGTACACGGTCCCAGCCGCTCTCGAAGCGGAAC
CGTGCCGGGAAGCTGGTTTCTAATCAGAAGAGTGACGTTCTCACCCGGTT
TACCACTAAATCAGGGCAGGAAATAGGAAGATTGCCCCGGGAAACAGCTG
AATGGGTCTCAACCCTGCTGGATCAAAGGGTGTGTACATTTGAGGGTGTA
TGCGTATACGTGCCGGACCGGGTCCGGGTGAATGACACCATCTATCTGCA
GCTGCGATGCTACTTACGCATCGAGGCATTCCAGCCACGGATATTTAGTC
AATCGATGGATGACAATAGGTCCGTTGCAATCTTCGAGGAGAAAGAAAGT
GCAGATGAGAAAGCACTGCGGCTCCGCCAAGTGGCTCTTGTGAAGCTGTT
TGATGAAATCCATCTTCAACCGACATCCGTCAATGACATGACGAGAAATC
ATAAGAAAGAAGGGTTGCTTCGTGCGGCGGAAATGGCTGAACAGCACGAG
CGAGTGAAAAAGGAAAATCAAACAAATGACGACTCTTCGGAGGAGGACAG
CCCTGAGCTTGAAGAGGATCAGCTTGATACCCTCTATAAGAAGGCTCAGT
CGTTCGACTTTAGCATGCCTGAAGCAGAACCTGCCTCGTCATTTACATTG
CATCTTCGAAAATATCAGAGGCAGGCACTATACTGGATGCTCGCAAAGGA
AAAGGACAATAAGTCTGCAAGGGAGACGTCGCTGCATCCCTTATGGGAGG
AGTACAGTTGGCCGTCCAGGGATGTCGACGACAAAGAACTCCCAGCTGTG
GCTGGCATTGACCACTTTTACGTCAACCCTTACTCTGGCGAACTTAGCCT
TGACTTCCCTGTCCAAGAGCAGCATTGCCTTGGGGGGATCCTGGCAGATG
AAATGGGCCTGGGTAAGACGATTGAGATGCTCAGTTTGGTCCACTCTCAT
CGCATTATGCCTCAGAAGCCCACTGATCTTGTGAGGTTGCCTCAGTCGGC
TTCCGGTGTCGTACCCGCCCCATATACCACTCTTGTGATTGCGCCCACAT
CCCTCCTTTCGCAGTGGGAAAGTGAAGCACTGAAGGCTTCGCAGCCGGGA
ACAATGAACGTCCTCATGTATTACGGGGCGGACAAGAATATCAATCTTAA
AAACCTCTGCGCTTCGGGAAATGCTGCTGCTCCCAATTTAATCATAACCA
GCTATGGCGTTGTTCTCTCGGAATACCGTCAGCACATGTCCGCGTTGCTC
TCATCTATGAGCTCCGGTGGCCTATTTTCCGTGGACTTCTTCCGAGTTAT
CGTCGATGAAGCTCATGTAATCAAGAACCGTCTGTCAAAGACAGCCAAGG
CGTGCTATGAGCTCAAGGCAACCCATCGTTGGGTGTTGACAGGAACTCCC
ATCGTTAATCGCCTGGAGGACCTGTTCAGCCTTGTGAGATTTCTCAAGGT
CGAGCCATGGAATAACTTCTCATTTTGGAAGACATTTATAACTGTACCTT
TTGAGTCCAAAGACTATGTGCGCGCCCTGAACGTTGTGCAGAGCGTGCTG
GAGCCCCTGGTCCTCCGACGTACGAAGACAATGAAGACACCCGAGGGTGA
ACCTTTAGTGCCTTTACCACGTCGCACCATCACAATAGAGGAAGTCGAAC
TTCCAGACCAGGAGCGGGAGATTTATGATCTTATCTTTACACGGGCAAAG
CAGACGTTCAATCACAATGTCGAAGCTGGCACTCTGTTGAAGTCCTATTC
AACAATCTTCGCACAAATTCTCCGCCTCCGCCAGACCTGCTGTCATCCTA
TCCTCACACGCAACAAAGCGATAGTTGCAGACGAGGAAGATGCAGCAGCG
GCTGCTGACGCAGCCAACGACCTCAAGGACGACATGGATCTTCAAGATCT
CATTGATCGCTTCAAGGCATCCACCGAAGCAGCCGAATCCAACGAGCCTC
AGGATCCCTCCGCCAAATTCACTGCCCATGCATTGAAACAAATCCAAAAC
GAAGCCAGCGGCGAATGTCCCATTTGCTCGGAAGAGCCCATGATTGACCC
TGCCGTAACGGCATGCTGGCACAGTGCATGCAAGAAATGTCTGGAGGACT
ACATCCGCCACCAAACCGACAAGGGCATGGACCCTCGGTGCTTTTCATGC
CGAGCACCCACCACGTCGCGGGACATTTTCGAAGTGGTTCGTCATGAAAG
CCCCAATACCACACCCGAAGACGATATATATAGCAGTACTCCAACCCCCT
CTCAAGCGCCTCCCCGAATAAGCCTCCGCCGTATCCACCCTCTTTCGCCG
TCTGCCCATACATCTGCCAAAGTGCATGCCCTTCTCGCTCATCTTGCCCG
CGTCCCTGCCAATACCAAATCCGTTGTCTTTTCCCAATTTACCAGTTTCC
TCGACCTCATTTCCCCCCAACTCACCCGTGCGGGTATCCATCACGTCCGT
CTGGATGGTACCATGCCGCACAAAGCCCGTGCGGAAACCCTCGCGCAATT
CAACCGGGTCGAAACCTTTGCCGACCAAAATGAAATTGACAACGATGTCG
ACGCCAACGATTCCACCCAGCTTCCCCTCTCCAGGGCAAAGCACAGACAC
TCGACCGCCCCGCCCCCTCCCACCGTTCTTCTTATCAGTCTCCGCGCCGG
AGGTGTGGGTCTTAATCTCACGGCAGCTAGTAATGTCTTCATGATGGATC
CTTGGTGGAGCTTTGCAATTGAGGCTCAGGCTATTGATCGGGTTCATCGC
ATGGGACAGACACGGGATGTGCAAGTGACACGGTTCGTGGTGAAGGACTC
CATCGAGGGAAGAATGTTGAGGGTTCAGGAACGGAAGATGAATATTGCAG
GGTCTTTAGGACTGAGGGTTGGTGGAGATGGCTCCGAGGATGACAAGAAG
AAGGAAAGAATCGAGGAGTTGAGGTTGTTATTTGAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAD5CBS51388_006047Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006047-T1.exon1CBS51388_006047-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006047-T1.cdsCBS51388_006047-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006047-T1CBS51388_006047-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR038718
DBxrefInterPro:IPR000330
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR014905
DBxrefInterPro:IPR001841
DBxrefPFAM:PF00176
DBxrefPFAM:PF08797
DBxrefPFAM:PF00271
ProductDNA helicase rad5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:489636..493274 +
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