|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:520412..521712- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006060-T1 ID=CBS51388_006060-T1|Name=CBS51388_006060-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1301bp|location=Sequence derived from alignment at An09:520412..521712- (Aspergillus niger CBS 513.88)
ATGAGCGAGCAATACCTTGGCCTACCTATTGCCCCAGCAGATACAGCCTT
CGGGTTAATGGCAGAATACGATGCAGACCAGCACCCAAACAAAGTATCCC
TGATAGCAGGGGCCTACCGCGACGAGAACGGCCAACCCTGGGTACTTCCG
AGCGTGAGAGAGGTTCGCTAATACTGTCAGGACTATATTTTGGCTATTGA
AAAGCTAACTCTTAGAGTTAGGCAAAAGAGCTCCTCGCTCAAAGTCAAAA
CCATGAATATCTCGGCATCGCAGGCTCCCCAGCCCTAATTAACCTAGCCC
AGTCCCTTACATTCGGATCCGAGATTACCGCAAAGCTAGAAAAGAGCATC
ACTTCCATCCAAACAGTCTCAGGAACAGGCGCAAACCACATGGCTGCGCA
CTTCCTAGCACATCATCTTCGCCCAAAGCGGGTATTCATACCCTCGCCGA
CATGGATCAATCATAAGACTATCTGGGCCAACGTCGGGGTCCCTATCGCA
GAGTATCCTTACTACTCCACAAAAACCAGGGGAGTGGACTTGGAAGGAAT
GCTCTCAGTGTTTAAAACAACCGCCGAGGAGAGAGATGTAGTGATCCTGC
AAGCCTGTGCACATAACCCGACAGGTGTGGACCTCACCCACGAGCAATGG
GCACAAGTAGCGGAGGTAATGAAGCGGAAGAAACTATACGTTGTGTTTGA
CAGCGCATACCAAGGATTTGCTACAGGCGACGTGGACGGTGATGCCTGGT
CAATTCGGTTTTTCGTGGAGCAACTGATCTTGGATGGACAGCCCGACTGT
CCAGGCCTCTGCGTGGCTCAGTCTTTTTCTAAAAATTTCGGACTTTATGG
CGAGCGTGTAGGTGCTCTCCACCTTGTCGTGCCGCGGCATCTTGGAGCTC
AGGGTGCCCGCTCGGAATTGGTTGCTCTCGCTCGCTCCGAGTACTCCAAT
CCCCCTCGCTTCGGGGCGAGTATTGTCGAGACTGTCCTGGGGAATGAGAA
GTTGAAAGGTCAATGGTTGAGAGATTTGGATACTATGAGTTCGAAAATCA
AGAACATGCGGCGTGAGCTTCGCAGAAGGCTGGAAAACAAGGGGACGCCC
GGGGATTGGTCGGTTTTGGAGAGCCAGATTGGTATGTTTAGCTACACGGC
GCTGGATCAAGAACAGGTCACTCGTTTGCGGGAGAAGTTTCATATCTATC
TCTTGCCTTCCGGGAGAGTGAGTATCTGTGGGCTGAACGAGAAGAATATT
GAGTATGTGGCGAGTGCATTTGGTGAGGCGATCGAACTCAATTCTAGCTG
A back to topCoding sequence (CDS) from alignment at An09:520412..521712- >CBS51388_006060-T1 ID=CBS51388_006060-T1|Name=CBS51388_006060-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2484bp|location=Sequence derived from alignment at An09:520412..521712- (Aspergillus niger CBS 513.88)
GCAAAAGAGCTCCTCGCTCAAAGTCAAAACCATGAATATCTCGGCATCGC
AGGCTCCCCAGCCCTAATTAACCTAGCCCAGTCCCTTACATTCGGATCCG
AGATTACCGCAAAGCTAGAAAAGAGCATCACTTCCATCCAAACAGTCTCA
GGAACAGGCGCAAACCACATGGCTGCGCACTTCCTAGCACATCATCTTCG
CCCAAAGCGGGTATTCATACCCTCGCCGACATGGATCAATCATAAGACTA
TCTGGGCCAACGTCGGGGTCCCTATCGCAGAGTATCCTTACTACTCCACA
AAAACCAGGGGAGTGGACTTGGAAGGAATGCTCTCAGTGTTTAAAACAAC
CGCCGAGGAGAGAGATGTAGTGATCCTGCAAGCCTGTGCACATAACCCGA
CAGGTGTGGACCTCACCCACGAGCAATGGGCACAAGTAGCGGAGGTAATG
AAGCGGAAGAAACTATACGTTGTGTTTGACAGCGCATACCAAGGATTTGC
TACAGGCGACGTGGACGGTGATGCCTGGTCAATTCGGTTTTTCGTGGAGC
AACTGATCTTGGATGGACAGCCCGACTGTCCAGGCCTCTGCGTGGCTCAG
TCTTTTTCTAAAAATTTCGGACTTTATGGCGAGCGTGTAGGTGCTCTCCA
CCTTGTCGTGCCGCGGCATCTTGGAGCTCAGGGTGCCCGCTCGGAATTGG
TTGCTCTCGCTCGCTCCGAGTACTCCAATCCCCCTCGCTTCGGGGCGAGT
ATTGTCGAGACTGTCCTGGGGAATGAGAAGTTGAAAGGTCAATGGTTGAG
AGATTTGGATACTATGAGTTCGAAAATCAAGAACATGCGGCGTGAGCTTC
GCAGAAGGCTGGAAAACAAGGGGACGCCCGGGGATTGGTCGGTTTTGGAG
AGCCAGATTGGTATGTTTAGCTACACGGCGCTGGATCAAGAACAGGTCAC
TCGTTTGCGGGAGAAGTTTCATATCTATCTCTTGCCTTCCGGGAGAGTGA
GTATCTGTGGGCTGAACGAGAAGAATATTGAGTATGTGGCGAGTGCATTT
GGTGAGGCGATCGAACTCAATTCTAGCTGAATGAGCGAGCAATACCTTGG
CCTACCTATTGCCCCAGCAGATACAGCCTTCGGGTTAATGGCAGAATACG
ATGCAGACCAGCACCCAAACAAAGTATCCCTGATAGCAGGGGCCTACCGC
GACGAGAACGGCCAACCCTGGGTACTTCCGAGCGTGAGAGAGGCAAAAGA
GCTCCTCGCTCAAAGTCAAAACCATGAATATCTCGGCATCGCAGGCTCCC
CAGCCCTAATTAACCTAGCCCAGTCCCTTACATTCGGATCCGAGATTACC
GCAAAGCTAGAAAAGAGCATCACTTCCATCCAAACAGTCTCAGGAACAGG
CGCAAACCACATGGCTGCGCACTTCCTAGCACATCATCTTCGCCCAAAGC
GGGTATTCATACCCTCGCCGACATGGATCAATCATAAGACTATCTGGGCC
AACGTCGGGGTCCCTATCGCAGAGTATCCTTACTACTCCACAAAAACCAG
GGGAGTGGACTTGGAAGGAATGCTCTCAGTGTTTAAAACAACCGCCGAGG
AGAGAGATGTAGTGATCCTGCAAGCCTGTGCACATAACCCGACAGGTGTG
GACCTCACCCACGAGCAATGGGCACAAGTAGCGGAGGTAATGAAGCGGAA
GAAACTATACGTTGTGTTTGACAGCGCATACCAAGGATTTGCTACAGGCG
ACGTGGACGGTGATGCCTGGTCAATTCGGTTTTTCGTGGAGCAACTGATC
TTGGATGGACAGCCCGACTGTCCAGGCCTCTGCGTGGCTCAGTCTTTTTC
TAAAAATTTCGGACTTTATGGCGAGCGTGTAGGTGCTCTCCACCTTGTCG
TGCCGCGGCATCTTGGAGCTCAGGGTGCCCGCTCGGAATTGGTTGCTCTC
GCTCGCTCCGAGTACTCCAATCCCCCTCGCTTCGGGGCGAGTATTGTCGA
GACTGTCCTGGGGAATGAGAAGTTGAAAGGTCAATGGTTGAGAGATTTGG
ATACTATGAGTTCGAAAATCAAGAACATGCGGCGTGAGCTTCGCAGAAGG
CTGGAAAACAAGGGGACGCCCGGGGATTGGTCGGTTTTGGAGAGCCAGAT
TGGTATGTTTAGCTACACGGCGCTGGATCAAGAACAGGTCACTCGTTTGC
GGGAGAAGTTTCATATCTATCTCTTGCCTTCCGGGAGAGTGAGTATCTGT
GGGCTGAACGAGAAGAATATTGAGTATGTGGCGAGTGCATTTGGTGAGGC
GATCGAACTCAATTCTAGCTGAATGAGCGAGCAATACCTTGGCCTACCTA
TTGCCCCAGCAGATACAGCCTTCGGGTTAATGGCAGAATACGATGCAGAC
CAGCACCCAAACAAAGTATCCCTGATAGCAGGGGCCTACCGCGACGAGAA
CGGCCAACCCTGGGTACTTCCGAGCGTGAGAGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009058 | biosynthetic process |
| GO:0006520 | cellular amino acid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030170 | pyridoxal phosphate binding |
| GO:0003824 | catalytic activity |
| GO:0008483 | transaminase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015424 |
| DBxref | InterPro:IPR004838 |
| DBxref | InterPro:IPR004839 |
| DBxref | InterPro:IPR015422 |
| DBxref | InterPro:IPR015421 |
| DBxref | InterPro:IPR000796 |
| DBxref | PFAM:PF00155 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:520412..521712 - |
|
