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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:637458..639350- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006100-T1 ID=CBS51388_006100-T1|Name=CBS51388_006100-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1893bp|location=Sequence derived from alignment at An09:637458..639350- (Aspergillus niger CBS 513.88)
ATGCCGTCCGACCAGCCCTACCCGACCCGAGAGGATGATGCCTCCCGATC
CCCGAGTCCAAGCAATGACAAGAACAAGGCCGCCGTTGAAGTGACGCAGA
CCAGCCTGGACTCGGCTCCAATGTCTGGGCGATCCTCCCTCTCACTGACC
GATCAAGCCAGCAGTAGTAAATTCGCCTCCACCCCCGCGACCGGAGCTCA
AACCCCGGATCCGTTGTATGCCCACCTCGCCGGCCACGACGACACGCTCA
AGAAATTCCCCCAGATTATTGCGCGCGCCCGAGACGACAGTGAAGATGAA
TCTTATGAGCTACCGGTTGGGCAACACAATCGCGGCGATGCGGATCCTAC
CGATGGCCAGCACCTCAGCTACCGCCGGCCTTCTATGGTGGTTGCTCAGG
GCAGGGACTTCCCCGACGAGGCCGGCTCTCCACCCCCCAAGCCCACCCAG
GGTCGTCCGCCGGAAATCAGCAGCTTTGGTGCCGAGATCGTGTTGATCGC
GGTCTGCTCCGCAGGTCTGATGTTGTTCTCCTTCCTCCTGGGTGATGTGC
TCGCTCCGCAGCTCCAGTTCCGGCAAGCCCTCGGCATCACCAATACCGAG
TTGCCTTGGCTTGTCGGCTCCTTCAACGTCGCCAATGGCCTGTCCGTCGT
GGTGTCCGGCTCGTTGACCGACCTGACGCCTCCCAAAGCCCTGATGGTTG
GGGCCTTCATCTGGCTCACTGTCTGGAACATCATCGGCGCCTTCTCCGTC
CATCCCTCCCGCTATGTACTCTTCTTCGTGGTGCGTGCCATGCAGGGCCT
GGCCATCGGTGTCTTGGTCTCCGGTAGCATGAGCATCCTCGGCCGCGTCT
ACAAGCCAGGAATTCGCAAGAACCGCGTCTTCTCCGCCATGGCCGCCTGC
GCCCCATTCGGCTTCTCTCTGGGCGCCATCGAAGGCGGTCTCCTCTATCA
GAATCTTCCTTGGATCTTCGGCTGCAACGCCATCATCACCGCCATCTGTG
CCGTAGGCGCCTACTTCTCCATCCCCCCGCTGCGCCCCATGGCAGACTCC
GCCGGAGGTGAAGTGCCCTCGCTGCGCCAGTTCGACTACCTCGGCGCCGC
CTTCGCCGTCGGCGGCTGTGTCTGCTTGCTCTTCGGACTCACCCAGGGCG
GCGTCACCGACTGGTCCGTATATACCTGCGTGCTCACAGCGGTGGGCATT
GTCCTGCTCATCGGCCTCTTCATCGTAGAGCGCTACGTACCACGCCCTCT
GATCCCGAACCGCCTCTGGAAGACCAAGGGGTTCACCCCGCTCATGATCG
CCTACTTCCTGGGCTTCGGATCTTTCTTCGGCGCCTGGCAGTTCTACGCC
ATCCAGTTCTGGCTGCGCATCCAGCACGCCAGTCCCATCGATGTGGCGCT
ATACCATCTCCCAAACGCCATCTTCGGCGTCATCGCCACCTGGGTAGTCA
GTCGCACCTTGCATCTTGTCCCGGGCCATTACATCTACACCATCTCCATG
TTCGCCTTCACGCTCGGTCCGGCCTTCTTCCTCCCGCAGAGCCCTACCAC
TACGTACTGGGAATTGTCCCTGCCTGGAGTTGCCCTCGTCACTTTCGGCC
CCGATCTGGCTTTCGCGGCCGCTTCCATCTTCATTACTAGTAATGTGGCG
CGCTCGTACCAGGGCAGTGCTGGGAGTCTGCTGGTCACGAACCAGAACCT
GTCGTCGGCGATTATTACTAGTGTGGCGGATGCGATTGGCACGCGGGTCG
ATAAGCAGGCCGATGGAAGTGTTGGGCTTAGTGGGCTGCGTGCTATTTGG
TGGTTTGCGCTGGCGTGTCAGTTGCTGGCGGCGCTGGTTACGGTGACGTC
GGTGAGGATACCCAAGGAGGAAGAGAAGGAGCACGTTACTTAA back to topCoding sequence (CDS) from alignment at An09:637458..639350- >CBS51388_006100-T1 ID=CBS51388_006100-T1|Name=CBS51388_006100-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1893bp|location=Sequence derived from alignment at An09:637458..639350- (Aspergillus niger CBS 513.88)
ATGCCGTCCGACCAGCCCTACCCGACCCGAGAGGATGATGCCTCCCGATC
CCCGAGTCCAAGCAATGACAAGAACAAGGCCGCCGTTGAAGTGACGCAGA
CCAGCCTGGACTCGGCTCCAATGTCTGGGCGATCCTCCCTCTCACTGACC
GATCAAGCCAGCAGTAGTAAATTCGCCTCCACCCCCGCGACCGGAGCTCA
AACCCCGGATCCGTTGTATGCCCACCTCGCCGGCCACGACGACACGCTCA
AGAAATTCCCCCAGATTATTGCGCGCGCCCGAGACGACAGTGAAGATGAA
TCTTATGAGCTACCGGTTGGGCAACACAATCGCGGCGATGCGGATCCTAC
CGATGGCCAGCACCTCAGCTACCGCCGGCCTTCTATGGTGGTTGCTCAGG
GCAGGGACTTCCCCGACGAGGCCGGCTCTCCACCCCCCAAGCCCACCCAG
GGTCGTCCGCCGGAAATCAGCAGCTTTGGTGCCGAGATCGTGTTGATCGC
GGTCTGCTCCGCAGGTCTGATGTTGTTCTCCTTCCTCCTGGGTGATGTGC
TCGCTCCGCAGCTCCAGTTCCGGCAAGCCCTCGGCATCACCAATACCGAG
TTGCCTTGGCTTGTCGGCTCCTTCAACGTCGCCAATGGCCTGTCCGTCGT
GGTGTCCGGCTCGTTGACCGACCTGACGCCTCCCAAAGCCCTGATGGTTG
GGGCCTTCATCTGGCTCACTGTCTGGAACATCATCGGCGCCTTCTCCGTC
CATCCCTCCCGCTATGTACTCTTCTTCGTGGTGCGTGCCATGCAGGGCCT
GGCCATCGGTGTCTTGGTCTCCGGTAGCATGAGCATCCTCGGCCGCGTCT
ACAAGCCAGGAATTCGCAAGAACCGCGTCTTCTCCGCCATGGCCGCCTGC
GCCCCATTCGGCTTCTCTCTGGGCGCCATCGAAGGCGGTCTCCTCTATCA
GAATCTTCCTTGGATCTTCGGCTGCAACGCCATCATCACCGCCATCTGTG
CCGTAGGCGCCTACTTCTCCATCCCCCCGCTGCGCCCCATGGCAGACTCC
GCCGGAGGTGAAGTGCCCTCGCTGCGCCAGTTCGACTACCTCGGCGCCGC
CTTCGCCGTCGGCGGCTGTGTCTGCTTGCTCTTCGGACTCACCCAGGGCG
GCGTCACCGACTGGTCCGTATATACCTGCGTGCTCACAGCGGTGGGCATT
GTCCTGCTCATCGGCCTCTTCATCGTAGAGCGCTACGTACCACGCCCTCT
GATCCCGAACCGCCTCTGGAAGACCAAGGGGTTCACCCCGCTCATGATCG
CCTACTTCCTGGGCTTCGGATCTTTCTTCGGCGCCTGGCAGTTCTACGCC
ATCCAGTTCTGGCTGCGCATCCAGCACGCCAGTCCCATCGATGTGGCGCT
ATACCATCTCCCAAACGCCATCTTCGGCGTCATCGCCACCTGGGTAGTCA
GTCGCACCTTGCATCTTGTCCCGGGCCATTACATCTACACCATCTCCATG
TTCGCCTTCACGCTCGGTCCGGCCTTCTTCCTCCCGCAGAGCCCTACCAC
TACGTACTGGGAATTGTCCCTGCCTGGAGTTGCCCTCGTCACTTTCGGCC
CCGATCTGGCTTTCGCGGCCGCTTCCATCTTCATTACTAGTAATGTGGCG
CGCTCGTACCAGGGCAGTGCTGGGAGTCTGCTGGTCACGAACCAGAACCT
GTCGTCGGCGATTATTACTAGTGTGGCGGATGCGATTGGCACGCGGGTCG
ATAAGCAGGCCGATGGAAGTGTTGGGCTTAGTGGGCTGCGTGCTATTTGG
TGGTTTGCGCTGGCGTGTCAGTTGCTGGCGGCGCTGGTTACGGTGACGTC
GGTGAGGATACCCAAGGAGGAAGAGAAGGAGCACGTTACTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:637458..639350 - |
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