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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:683413..685593+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006113-T1 ID=CBS51388_006113-T1|Name=CBS51388_006113-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2181bp|location=Sequence derived from alignment at An09:683413..685593+ (Aspergillus niger CBS 513.88)
ATGGTAAGGATCAAGCTATTTCTTTCTTTGATCGATTGATCATCTAGCTA
ACGAGTCAACTGAAGTTCCCCGATTTCAGCGCCCATTTGCATGAGTACTA
TCGAAACAAGCAAACTCCCACCAACCCAGGTTTTACGGATTATCTGACCC
TGAGACGACTCAAGCACGATCTAAGGGGACCTGATAGACGACGGCAGGGG
GGTCAAGTACCCTCCTCAAAACTCAAGCTAGTTGAATTGTTGCCCGATCG
TCCTCTAGCTGAGTACTTGATGCAGCTGTACTTCTCAACCTTCGAGACCA
CACTGCGCATATTACACGTCCCATCATTTACCAGCGAATGGGACGCCTTC
TGGGATCGTAGCGCATCCCACATTGACGGATCTCTCAACAGCAACAAGAC
CGACGTATTGATCGCGAAACTCCTCATGTTAATGGCATGTGCCAGCTGCT
TCGCTACCAATAAGGCCGAACCACTAACATCTGCCGGCTTCAACCCGCAT
TCATTGATACAGAGGTGCCAGAAATGGATCGAAGCAGTCACCACATGGCT
AGCATCCATGACAAGCCACGCCCAAATGAATTCAGACGTGATCCAGATCA
AATGCCTATTACTGCTCGCACAGCAAGCAACCGCCCAAGAGGGCGACCTA
GTCAGCATGGCCTCCGGCTCACTACTCCGCGAAGCGATGCTAATGGGCCT
TCATCGGAACCCATGCAACTTCCCCAACGTCTCCCCGTATTGGGCCGAAC
TGCGAAAACGCCTCTGGCTGACGATCATCGAGCTGGAGCTCCAAGCCTCC
CTATATAGCGGGATACCATTGGCAATATCATGGGACGAATTCGACTGTCC
CTTGCCATCTGATATCGACGACGAGGACTTTACCATCGAGTCACCGCGCC
TACCTCCCCCAAGACGATCTGATACCTTAACCAGAACGTCCTTCCAGATT
GCTCTCGCGCGGACCTTGGAAACCCGAATGGCAATATCCAAGATCGTCAA
CCGGGTACGTCTGAGCGCAACATACGATAATGAAATCATGACCCTCAGCG
AACGCCTCACAACAGGACTGGCGCAGGCCCCGCCAGATCTCCGCGACGAC
ACCGGCACAACAACCACCGCAGGTGGTTCACCCGACAACAATAGCAGCAC
CTCACCCTTCCGCCGCTCATTCTTCCTCTTCCTGCACTACCGCAGCCTCC
TCGCTCTGCACCGACCCTTCTTCCTGCGCTTCTCAGAAACCCCCGACGAA
CCCTTCAATTATTCCAGACGAGTATGCATACAGACCAGCCTAGCTCTACT
TTCTCAGCTAGAACACTTCTCAAACCACTGCCCCAACAACAACCACCCAT
CACCACCACCAGCTGTAAATAACAACCATACTCCCCCACACATCCTCCAC
CTCAAAGGCGGCCTATTCCGGGACGACATCTTCCACGCCGCGGCAACCAT
TTGCTTCGAGCTGCGCCTACAAACCAAATCCCAGGACCGCGTAATCGATC
CTCCCTTACCGGGTAGTAATATCTCGAAATACATGGACCAAAGTGTCCAT
TATCAACGGATGGCACTGTTCGAGGGCGTGGATAATGCGATTAGGTATTT
CGAGGGAAAGGTGCGGGTGGAGAAGAGAGCGACGAAGATGTTTAGTATCT
TGATGATTCTGTTTATGGTGGTTAGGAGTGAGATGGAGGGGGTTCAGATG
GATGGGGGTGGAGTAAGGGATGTGTTGAGGGTTGATGATGCTTGTCCGAT
TGCGTCGCGGAGGTGTAGGGAGGTGTTATTGGAGGGGTATCAATATCAGG
ATGAACATATTCAAGAAGGAGAGAGTGGTTGGATAATACAGCATCTAGTA
GGTTTTATTCACGGTCTTCGGGTGGTGTTATTCTGGATATACTGGCTAAG
TATAAGCAGGCATATTCATCGCAAATGCAGGGTTCGGAGACAGAATCCGT
TGGAGATGCGTGTCATCATACAAATGCTCTGCGGCCTATGGGTTGGGACG
AGGCTGTGGGTGGTGATTTGGTACGTGTTTGCATCCAGGAGCTCCTGGTT
TTGATGTGCCTCGATTCTGACTATCTCTTTGAATGTAGAGGCATCTCGAT
TTCGACTGGTGTTTCGCGCTTGATCCGTTATCTCCTTATCCGATGAATAA
CTGGTCGGATTTGGATCCTTTGGTTATGTGA back to topCoding sequence (CDS) from alignment at An09:683413..685593+ >CBS51388_006113-T1 ID=CBS51388_006113-T1|Name=CBS51388_006113-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=8028bp|location=Sequence derived from alignment at An09:683413..685593+ (Aspergillus niger CBS 513.88)
ATGCTAACGAGTCAACTGAAGTTCCCCGATTTCAGCGCCCATTTGCATGA
GTACTATCGAAACAAGCAAACTCCCACCAACCCAGGTTTTACGGATTATC
TGACCCTGAGACGACTCAAGCACGATCTAAGGGGACCTGATAGACGACGG
CAGGGGGGTCAAGTACCCTCCTCAAAACTCAAGCTAGTTGAATTGTTGCC
CGATCGTCCTCTAGCTGAGTACTTGATGCAGCTGTACTTCTCAACCTTCG
AGACCACACTGCGCATATTACACGTCCCATCATTTACCAGCGAATGGGAC
GCCTTCTGGGATCGTAGCGCATCCCACATTGACGGATCTCTCAACAGCAA
CAAGACCGACGTATTGATCGCGAAACTCCTCATGTTAATGGCATGTGCCA
GCTGCTTCGCTACCAATAAGGCCGAACCACTAACATCTGCCGGCTTCAAC
CCGCATTCATTGATACAGAGGTGCCAGAAATGGATCGAAGCAGTCACCAC
ATGGCTAGCATCCATGACAAGCCACGCCCAAATGAATTCAGACGTGATCC
AGATCAAATGCCTATTACTGCTCGCACAGCAAGCAACCGCCCAAGAGGGC
GACCTAGTCAGCATGGCCTCCGGCTCACTACTCCGCGAAGCGATGCTAAT
GGGCCTTCATCGGAACCCATGCAACTTCCCCAACGTCTCCCCGTATTGGG
CCGAACTGCGAAAACGCCTCTGGCTGACGATCATCGAGCTGGAGCTCCAA
GCCTCCCTATATAGCGGGATACCATTGGCAATATCATGGGACGAATTCGA
CTGTCCCTTGCCATCTGATATCGACGACGAGGACTTTACCATCGAGTCAC
CGCGCCTACCTCCCCCAAGACGATCTGATACCTTAACCAGAACGTCCTTC
CAGATTGCTCTCGCGCGGACCTTGGAAACCCGAATGGCAATATCCAAGAT
CGTCAACCGGGTACGTCTGAGCGCAACATACGATAATGAAATCATGACCC
TCAGCGAACGCCTCACAACAGGACTGGCGCAGGCCCCGCCAGATCTCCGC
GACGACACCGGCACAACAACCACCGCAGGTGGTTCACCCGACAACAATAG
CAGCACCTCACCCTTCCGCCGCTCATTCTTCCTCTTCCTGCACTACCGCA
GCCTCCTCGCTCTGCACCGACCCTTCTTCCTGCGCTTCTCAGAAACCCCC
GACGAACCCTTCAATTATTCCAGACGAGTATGCATACAGACCAGCCTAGC
TCTACTTTCTCAGCTAGAACACTTCTCAAACCACTGCCCCAACAACAACC
ACCCATCACCACCACCAGCTGTAAATAACAACCATACTCCCCCACACATC
CTCCACCTCAAAGGCGGCCTATTCCGGGACGACATCTTCCACGCCGCGGC
AACCATTTGCTTCGAGCTGCGCCTACAAACCAAATCCCAGGACCGCGTAA
TCGATCCTCCCTTACCGGGTAGTAATATCTCGAAATACATGGACCAAAGT
GTCCATTATCAACGGATGGCACTGTTCGAGGGCGTGGATAATGCGATTAG
GTATTTCGAGGGAAAGGTGCGGGTGGAGAAGAGAGCGACGAAGATGTTTA
GTATCTTGATGATTCTGTTTATGGTGGTTAGGAGTGAGATGGAGGGGGTT
CAGATGGATGGGGGTGGAGTAAGGGATGTGTTGAGGGTTGATGATGCTTG
TCCGATTGCGTCGCGGAGGTGTAGGGAGGTGTTATTGGAGGGGTATCAAT
ATCAGGATGAACATATTCAAGAAGGAGAGAGTGGTTGGATAATACAGCAT
CTAGCATATTCATCGCAAATGCAGGGTTCGGAGACAGAATCCGTTGGAGA
TGCGTGTCATCATACAAATGCTCTGCGGCCTATGGGTTGGGACGAGGCTG
TGGGTGGTGATTTGAGGCATCTCGATTTCGACTGGTGTTTCGCGCTTGAT
CCGTTATCTCCTTATCCGATGAATAACTGGTCGGATTTGGATCCTTTGGT
TATGTGAATGCTAACGAGTCAACTGAAGTTCCCCGATTTCAGCGCCCATT
TGCATGAGTACTATCGAAACAAGCAAACTCCCACCAACCCAGGTTTTACG
GATTATCTGACCCTGAGACGACTCAAGCACGATCTAAGGGGACCTGATAG
ACGACGGCAGGGGGGTCAAGTACCCTCCTCAAAACTCAAGCTAGTTGAAT
TGTTGCCCGATCGTCCTCTAGCTGAGTACTTGATGCAGCTGTACTTCTCA
ACCTTCGAGACCACACTGCGCATATTACACGTCCCATCATTTACCAGCGA
ATGGGACGCCTTCTGGGATCGTAGCGCATCCCACATTGACGGATCTCTCA
ACAGCAACAAGACCGACGTATTGATCGCGAAACTCCTCATGTTAATGGCA
TGTGCCAGCTGCTTCGCTACCAATAAGGCCGAACCACTAACATCTGCCGG
CTTCAACCCGCATTCATTGATACAGAGGTGCCAGAAATGGATCGAAGCAG
TCACCACATGGCTAGCATCCATGACAAGCCACGCCCAAATGAATTCAGAC
GTGATCCAGATCAAATGCCTATTACTGCTCGCACAGCAAGCAACCGCCCA
AGAGGGCGACCTAGTCAGCATGGCCTCCGGCTCACTACTCCGCGAAGCGA
TGCTAATGGGCCTTCATCGGAACCCATGCAACTTCCCCAACGTCTCCCCG
TATTGGGCCGAACTGCGAAAACGCCTCTGGCTGACGATCATCGAGCTGGA
GCTCCAAGCCTCCCTATATAGCGGGATACCATTGGCAATATCATGGGACG
AATTCGACTGTCCCTTGCCATCTGATATCGACGACGAGGACTTTACCATC
GAGTCACCGCGCCTACCTCCCCCAAGACGATCTGATACCTTAACCAGAAC
GTCCTTCCAGATTGCTCTCGCGCGGACCTTGGAAACCCGAATGGCAATAT
CCAAGATCGTCAACCGGGTACGTCTGAGCGCAACATACGATAATGAAATC
ATGACCCTCAGCGAACGCCTCACAACAGGACTGGCGCAGGCCCCGCCAGA
TCTCCGCGACGACACCGGCACAACAACCACCGCAGGTGGTTCACCCGACA
ACAATAGCAGCACCTCACCCTTCCGCCGCTCATTCTTCCTCTTCCTGCAC
TACCGCAGCCTCCTCGCTCTGCACCGACCCTTCTTCCTGCGCTTCTCAGA
AACCCCCGACGAACCCTTCAATTATTCCAGACGAGTATGCATACAGACCA
GCCTAGCTCTACTTTCTCAGCTAGAACACTTCTCAAACCACTGCCCCAAC
AACAACCACCCATCACCACCACCAGCTGTAAATAACAACCATACTCCCCC
ACACATCCTCCACCTCAAAGGCGGCCTATTCCGGGACGACATCTTCCACG
CCGCGGCAACCATTTGCTTCGAGCTGCGCCTACAAACCAAATCCCAGGAC
CGCGTAATCGATCCTCCCTTACCGGGTAGTAATATCTCGAAATACATGGA
CCAAAGTGTCCATTATCAACGGATGGCACTGTTCGAGGGCGTGGATAATG
CGATTAGGTATTTCGAGGGAAAGGTGCGGGTGGAGAAGAGAGCGACGAAG
ATGTTTAGTATCTTGATGATTCTGTTTATGGTGGTTAGGAGTGAGATGGA
GGGGGTTCAGATGGATGGGGGTGGAGTAAGGGATGTGTTGAGGGTTGATG
ATGCTTGTCCGATTGCGTCGCGGAGGTGTAGGGAGGTGTTATTGGAGGGG
TATCAATATCAGGATGAACATATTCAAGAAGGAGAGAGTGGTTGGATAAT
ACAGCATCTAGCATATTCATCGCAAATGCAGGGTTCGGAGACAGAATCCG
TTGGAGATGCGTGTCATCATACAAATGCTCTGCGGCCTATGGGTTGGGAC
GAGGCTGTGGGTGGTGATTTGAGGCATCTCGATTTCGACTGGTGTTTCGC
GCTTGATCCGTTATCTCCTTATCCGATGAATAACTGGTCGGATTTGGATC
CTTTGGTTATGTGAATGCTAACGAGTCAACTGAAGTTCCCCGATTTCAGC
GCCCATTTGCATGAGTACTATCGAAACAAGCAAACTCCCACCAACCCAGG
TTTTACGGATTATCTGACCCTGAGACGACTCAAGCACGATCTAAGGGGAC
CTGATAGACGACGGCAGGGGGGTCAAGTACCCTCCTCAAAACTCAAGCTA
GTTGAATTGTTGCCCGATCGTCCTCTAGCTGAGTACTTGATGCAGCTGTA
CTTCTCAACCTTCGAGACCACACTGCGCATATTACACGTCCCATCATTTA
CCAGCGAATGGGACGCCTTCTGGGATCGTAGCGCATCCCACATTGACGGA
TCTCTCAACAGCAACAAGACCGACGTATTGATCGCGAAACTCCTCATGTT
AATGGCATGTGCCAGCTGCTTCGCTACCAATAAGGCCGAACCACTAACAT
CTGCCGGCTTCAACCCGCATTCATTGATACAGAGGTGCCAGAAATGGATC
GAAGCAGTCACCACATGGCTAGCATCCATGACAAGCCACGCCCAAATGAA
TTCAGACGTGATCCAGATCAAATGCCTATTACTGCTCGCACAGCAAGCAA
CCGCCCAAGAGGGCGACCTAGTCAGCATGGCCTCCGGCTCACTACTCCGC
GAAGCGATGCTAATGGGCCTTCATCGGAACCCATGCAACTTCCCCAACGT
CTCCCCGTATTGGGCCGAACTGCGAAAACGCCTCTGGCTGACGATCATCG
AGCTGGAGCTCCAAGCCTCCCTATATAGCGGGATACCATTGGCAATATCA
TGGGACGAATTCGACTGTCCCTTGCCATCTGATATCGACGACGAGGACTT
TACCATCGAGTCACCGCGCCTACCTCCCCCAAGACGATCTGATACCTTAA
CCAGAACGTCCTTCCAGATTGCTCTCGCGCGGACCTTGGAAACCCGAATG
GCAATATCCAAGATCGTCAACCGGGTACGTCTGAGCGCAACATACGATAA
TGAAATCATGACCCTCAGCGAACGCCTCACAACAGGACTGGCGCAGGCCC
CGCCAGATCTCCGCGACGACACCGGCACAACAACCACCGCAGGTGGTTCA
CCCGACAACAATAGCAGCACCTCACCCTTCCGCCGCTCATTCTTCCTCTT
CCTGCACTACCGCAGCCTCCTCGCTCTGCACCGACCCTTCTTCCTGCGCT
TCTCAGAAACCCCCGACGAACCCTTCAATTATTCCAGACGAGTATGCATA
CAGACCAGCCTAGCTCTACTTTCTCAGCTAGAACACTTCTCAAACCACTG
CCCCAACAACAACCACCCATCACCACCACCAGCTGTAAATAACAACCATA
CTCCCCCACACATCCTCCACCTCAAAGGCGGCCTATTCCGGGACGACATC
TTCCACGCCGCGGCAACCATTTGCTTCGAGCTGCGCCTACAAACCAAATC
CCAGGACCGCGTAATCGATCCTCCCTTACCGGGTAGTAATATCTCGAAAT
ACATGGACCAAAGTGTCCATTATCAACGGATGGCACTGTTCGAGGGCGTG
GATAATGCGATTAGGTATTTCGAGGGAAAGGTGCGGGTGGAGAAGAGAGC
GACGAAGATGTTTAGTATCTTGATGATTCTGTTTATGGTGGTTAGGAGTG
AGATGGAGGGGGTTCAGATGGATGGGGGTGGAGTAAGGGATGTGTTGAGG
GTTGATGATGCTTGTCCGATTGCGTCGCGGAGGTGTAGGGAGGTGTTATT
GGAGGGGTATCAATATCAGGATGAACATATTCAAGAAGGAGAGAGTGGTT
GGATAATACAGCATCTAGCATATTCATCGCAAATGCAGGGTTCGGAGACA
GAATCCGTTGGAGATGCGTGTCATCATACAAATGCTCTGCGGCCTATGGG
TTGGGACGAGGCTGTGGGTGGTGATTTGAGGCATCTCGATTTCGACTGGT
GTTTCGCGCTTGATCCGTTATCTCCTTATCCGATGAATAACTGGTCGGAT
TTGGATCCTTTGGTTATGTGAATGCTAACGAGTCAACTGAAGTTCCCCGA
TTTCAGCGCCCATTTGCATGAGTACTATCGAAACAAGCAAACTCCCACCA
ACCCAGGTTTTACGGATTATCTGACCCTGAGACGACTCAAGCACGATCTA
AGGGGACCTGATAGACGACGGCAGGGGGGTCAAGTACCCTCCTCAAAACT
CAAGCTAGTTGAATTGTTGCCCGATCGTCCTCTAGCTGAGTACTTGATGC
AGCTGTACTTCTCAACCTTCGAGACCACACTGCGCATATTACACGTCCCA
TCATTTACCAGCGAATGGGACGCCTTCTGGGATCGTAGCGCATCCCACAT
TGACGGATCTCTCAACAGCAACAAGACCGACGTATTGATCGCGAAACTCC
TCATGTTAATGGCATGTGCCAGCTGCTTCGCTACCAATAAGGCCGAACCA
CTAACATCTGCCGGCTTCAACCCGCATTCATTGATACAGAGGTGCCAGAA
ATGGATCGAAGCAGTCACCACATGGCTAGCATCCATGACAAGCCACGCCC
AAATGAATTCAGACGTGATCCAGATCAAATGCCTATTACTGCTCGCACAG
CAAGCAACCGCCCAAGAGGGCGACCTAGTCAGCATGGCCTCCGGCTCACT
ACTCCGCGAAGCGATGCTAATGGGCCTTCATCGGAACCCATGCAACTTCC
CCAACGTCTCCCCGTATTGGGCCGAACTGCGAAAACGCCTCTGGCTGACG
ATCATCGAGCTGGAGCTCCAAGCCTCCCTATATAGCGGGATACCATTGGC
AATATCATGGGACGAATTCGACTGTCCCTTGCCATCTGATATCGACGACG
AGGACTTTACCATCGAGTCACCGCGCCTACCTCCCCCAAGACGATCTGAT
ACCTTAACCAGAACGTCCTTCCAGATTGCTCTCGCGCGGACCTTGGAAAC
CCGAATGGCAATATCCAAGATCGTCAACCGGGTACGTCTGAGCGCAACAT
ACGATAATGAAATCATGACCCTCAGCGAACGCCTCACAACAGGACTGGCG
CAGGCCCCGCCAGATCTCCGCGACGACACCGGCACAACAACCACCGCAGG
TGGTTCACCCGACAACAATAGCAGCACCTCACCCTTCCGCCGCTCATTCT
TCCTCTTCCTGCACTACCGCAGCCTCCTCGCTCTGCACCGACCCTTCTTC
CTGCGCTTCTCAGAAACCCCCGACGAACCCTTCAATTATTCCAGACGAGT
ATGCATACAGACCAGCCTAGCTCTACTTTCTCAGCTAGAACACTTCTCAA
ACCACTGCCCCAACAACAACCACCCATCACCACCACCAGCTGTAAATAAC
AACCATACTCCCCCACACATCCTCCACCTCAAAGGCGGCCTATTCCGGGA
CGACATCTTCCACGCCGCGGCAACCATTTGCTTCGAGCTGCGCCTACAAA
CCAAATCCCAGGACCGCGTAATCGATCCTCCCTTACCGGGTAGTAATATC
TCGAAATACATGGACCAAAGTGTCCATTATCAACGGATGGCACTGTTCGA
GGGCGTGGATAATGCGATTAGGTATTTCGAGGGAAAGGTGCGGGTGGAGA
AGAGAGCGACGAAGATGTTTAGTATCTTGATGATTCTGTTTATGGTGGTT
AGGAGTGAGATGGAGGGGGTTCAGATGGATGGGGGTGGAGTAAGGGATGT
GTTGAGGGTTGATGATGCTTGTCCGATTGCGTCGCGGAGGTGTAGGGAGG
TGTTATTGGAGGGGTATCAATATCAGGATGAACATATTCAAGAAGGAGAG
AGTGGTTGGATAATACAGCATCTAGCATATTCATCGCAAATGCAGGGTTC
GGAGACAGAATCCGTTGGAGATGCGTGTCATCATACAAATGCTCTGCGGC
CTATGGGTTGGGACGAGGCTGTGGGTGGTGATTTGAGGCATCTCGATTTC
GACTGGTGTTTCGCGCTTGATCCGTTATCTCCTTATCCGATGAATAACTG
GTCGGATTTGGATCCTTTGGTTATGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:683413..685593 + |
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