|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:823645..825415- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006157-T1 ID=CBS51388_006157-T1|Name=CBS51388_006157-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1771bp|location=Sequence derived from alignment at An09:823645..825415- (Aspergillus niger CBS 513.88)
ATGGACCACTTCGACGCAGGCTCGCTGCGCTCCTACCCATCCACTGTCGC
ATTGGATAATTGCCCTCCCTCAAACGCGATTTCGCCATGGCGGTCATCCT
CCTCTTCCGCTCCCACCATTGAAGATGAATCGCGAGAGGGGCACAGGCGA
CGGCCCAGCGAGATCCTCCTGGGATTCCCTCGCCCTCCTAGCCGTGCACA
TGTCGCAACGAAAACCCTCATCTCGAGGCCTTCTATCAAGACGCTTCGTA
GGAATTTTATGATTCACGAGCTGCCCCTTCTTCAACAGCCGAACCCGTAC
TATGACGAATCTGAAGAGTTCAATCCTGTCTATGACCCTGGCTTATCCTA
TGATCTGATTGCACCATCGCACGATACAAACGAAGCTCCGCCGCTTCATG
ACCTTGAGCGTCTCGCTGATCTCGTATTCTCATCGGAGCATATGCTCACC
ATTCTGAACAACCCGCGCTATCTTGCGCAATTTCGCGAATTCCTGCTTGA
GGAACGTCCCCGCTCTCTCCATCGGTTGACTTATTATTTGACGGCGCGCA
AGGCTCTCAAGGCAATAGACTACGCGAACGGCTTGGTGCGATGCGTCGTC
GATGATGCTCAGCCGAAATCATCAACGTCGGGGTTGTTAGGACAGAAGAT
CGGAGAGATCGCCCACCCGGCACTGCAACAACGAGTACAGGAGGCTCTCA
AGGTACTCACTGACGAGGAACTCCCTGCATTTATTACCTCGCGCTGCATC
GGCATTACCAGCCGGGTAGTGGAGGAAAGGGTCAGGGGGACCTTACCGAA
AAGATTTCAAAGAACAGACGAGGAGAAGGGGTTGGCGGAGGTATTCTGTC
TTACGGATCCATCGAGGCGGGACAATCCGATAGTTTTTGCTTCGGAGGGT
GAGTAGATTCCTGTTTTTGCTGAGTGTGTGCTCTTTTGCTGATATTTGTT
GGTTGTGGCGGGGCGCAGAATTCCATCGCACGACACAGTATGGAATGGAC
TACGTGCTTGGTCGGAATTGTCGGTTTTTGCAGGGACCAAAGACAAATGC
GAATAGTGTGAGGAGAATTAAGGAGGCGATAGAAGCGGGGAGGCATCATT
CAGAGTTGTTTCTGAATTAGTGAGTTTGTCTGCACCCATACTGCGATCAT
TCGCTGACAGTCGAACGATGTAGCCGTCGGGATGGCTCACCATTTATGAA
TCTCCTCCAATGTGCTCCACTATGCGACAGCCATGGCAGAGTGCGGTACT
TTATTGGTGCTCAGATCGATGTTAGTGGATTGGTTATGGACGGCGTCCAG
ATGGAATCGCTGCGAGATTTGCAACAGCAACAGATGAGAGATGGTGTTGA
AGTGACAGATGCACCCCTTGGGATCCAGAAAGACGAGTTTCGTGATTTGA
GTGAGCTATTCAGTCCACGCGAGTTGAAGGTCACCCAAGATATTGGAGGA
AGTCTCTTCCAGCCGGTGACTTCTCCGGCATTGCGCAATAGCTCCCGGAC
AAAGTGGTCTGTTGCCGATGGCGAGGATTCTGTTGAGCCGAAGGCGAAAA
GAGAGACAAGCATCATGACAGGTACAGCGTTGGTGGGCGCTTACGAGAAT
GTAAGTATCCCTCACCTAATATGGGGCAGAGGGCTAACTCTTACAGTATC
TTCTCGTCCGACCTTATCCATCCCTAAGGATATTGTTTACTTCGCCGTCG
CTTCAAATTCCTGGAATACTACAGTCCTCTTTCCTCTCTAGAATTGGGAG
CAGTGCAGCAGTCAGGGATGA back to topCoding sequence (CDS) from alignment at An09:823645..825415- >CBS51388_006157-T1 ID=CBS51388_006157-T1|Name=CBS51388_006157-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6024bp|location=Sequence derived from alignment at An09:823645..825415- (Aspergillus niger CBS 513.88)
AATTGGGAGCAGTGCAGCAGTCAGGGATGACCGTCGGGATGGCTCACCAT
TTATGAATCTCCTCCAATGTGCTCCACTATGCGACAGCCATGGCAGAGTG
CGGTACTTTATTGGTGCTCAGATCGATGTTAGTGGATTGGTTATGGACGG
CGTCCAGATGGAATCGCTGCGAGATTTGCAACAGCAACAGATGAGAGATG
GTGTTGAAGTGACAGATGCACCCCTTGGGATCCAGAAAGACGAGTTTCGT
GATTTGAGTGAGCTATTCAGTCCACGCGAGTTGAAGGTCACCCAAGATAT
TGGAGGAAGTCTCTTCCAGCCGGTGACTTCTCCGGCATTGCGCAATAGCT
CCCGGACAAAGTGGTCTGTTGCCGATGGCGAGGATTCTGTTGAGCCGAAG
GCGAAAAGAGAGACAAGCATCATGACAGGTACAGCGTTGGTGGGCGCTTA
CGAGAATAATTCCATCGCACGACACAGTATGGAATGGACTACGTGCTTGG
TCGGAATTGTCGGTTTTTGCAGGGACCAAAGACAAATGCGAATAGTGTGA
GGAGAATTAAGGAGGCGATAGAAGCGGGGAGGCATCATTCAGAGTTGTTT
CTGAATTAATGGACCACTTCGACGCAGGCTCGCTGCGCTCCTACCCATCC
ACTGTCGCATTGGATAATTGCCCTCCCTCAAACGCGATTTCGCCATGGCG
GTCATCCTCCTCTTCCGCTCCCACCATTGAAGATGAATCGCGAGAGGGGC
ACAGGCGACGGCCCAGCGAGATCCTCCTGGGATTCCCTCGCCCTCCTAGC
CGTGCACATGTCGCAACGAAAACCCTCATCTCGAGGCCTTCTATCAAGAC
GCTTCGTAGGAATTTTATGATTCACGAGCTGCCCCTTCTTCAACAGCCGA
ACCCGTACTATGACGAATCTGAAGAGTTCAATCCTGTCTATGACCCTGGC
TTATCCTATGATCTGATTGCACCATCGCACGATACAAACGAAGCTCCGCC
GCTTCATGACCTTGAGCGTCTCGCTGATCTCGTATTCTCATCGGAGCATA
TGCTCACCATTCTGAACAACCCGCGCTATCTTGCGCAATTTCGCGAATTC
CTGCTTGAGGAACGTCCCCGCTCTCTCCATCGGTTGACTTATTATTTGAC
GGCGCGCAAGGCTCTCAAGGCAATAGACTACGCGAACGGCTTGGTGCGAT
GCGTCGTCGATGATGCTCAGCCGAAATCATCAACGTCGGGGTTGTTAGGA
CAGAAGATCGGAGAGATCGCCCACCCGGCACTGCAACAACGAGTACAGGA
GGCTCTCAAGGTACTCACTGACGAGGAACTCCCTGCATTTATTACCTCGC
GCTGCATCGGCATTACCAGCCGGGTAGTGGAGGAAAGGGTCAGGGGGACC
TTACCGAAAAGATTTCAAAGAACAGACGAGGAGAAGGGGTTGGCGGAGGT
ATTCTGTCTTACGGATCCATCGAGGCGGGACAATCCGATAGTTTTTGCTT
CGGAGGAATTGGGAGCAGTGCAGCAGTCAGGGATGACCGTCGGGATGGCT
CACCATTTATGAATCTCCTCCAATGTGCTCCACTATGCGACAGCCATGGC
AGAGTGCGGTACTTTATTGGTGCTCAGATCGATGTTAGTGGATTGGTTAT
GGACGGCGTCCAGATGGAATCGCTGCGAGATTTGCAACAGCAACAGATGA
GAGATGGTGTTGAAGTGACAGATGCACCCCTTGGGATCCAGAAAGACGAG
TTTCGTGATTTGAGTGAGCTATTCAGTCCACGCGAGTTGAAGGTCACCCA
AGATATTGGAGGAAGTCTCTTCCAGCCGGTGACTTCTCCGGCATTGCGCA
ATAGCTCCCGGACAAAGTGGTCTGTTGCCGATGGCGAGGATTCTGTTGAG
CCGAAGGCGAAAAGAGAGACAAGCATCATGACAGGTACAGCGTTGGTGGG
CGCTTACGAGAATAATTCCATCGCACGACACAGTATGGAATGGACTACGT
GCTTGGTCGGAATTGTCGGTTTTTGCAGGGACCAAAGACAAATGCGAATA
GTGTGAGGAGAATTAAGGAGGCGATAGAAGCGGGGAGGCATCATTCAGAG
TTGTTTCTGAATTAATGGACCACTTCGACGCAGGCTCGCTGCGCTCCTAC
CCATCCACTGTCGCATTGGATAATTGCCCTCCCTCAAACGCGATTTCGCC
ATGGCGGTCATCCTCCTCTTCCGCTCCCACCATTGAAGATGAATCGCGAG
AGGGGCACAGGCGACGGCCCAGCGAGATCCTCCTGGGATTCCCTCGCCCT
CCTAGCCGTGCACATGTCGCAACGAAAACCCTCATCTCGAGGCCTTCTAT
CAAGACGCTTCGTAGGAATTTTATGATTCACGAGCTGCCCCTTCTTCAAC
AGCCGAACCCGTACTATGACGAATCTGAAGAGTTCAATCCTGTCTATGAC
CCTGGCTTATCCTATGATCTGATTGCACCATCGCACGATACAAACGAAGC
TCCGCCGCTTCATGACCTTGAGCGTCTCGCTGATCTCGTATTCTCATCGG
AGCATATGCTCACCATTCTGAACAACCCGCGCTATCTTGCGCAATTTCGC
GAATTCCTGCTTGAGGAACGTCCCCGCTCTCTCCATCGGTTGACTTATTA
TTTGACGGCGCGCAAGGCTCTCAAGGCAATAGACTACGCGAACGGCTTGG
TGCGATGCGTCGTCGATGATGCTCAGCCGAAATCATCAACGTCGGGGTTG
TTAGGACAGAAGATCGGAGAGATCGCCCACCCGGCACTGCAACAACGAGT
ACAGGAGGCTCTCAAGGTACTCACTGACGAGGAACTCCCTGCATTTATTA
CCTCGCGCTGCATCGGCATTACCAGCCGGGTAGTGGAGGAAAGGGTCAGG
GGGACCTTACCGAAAAGATTTCAAAGAACAGACGAGGAGAAGGGGTTGGC
GGAGGTATTCTGTCTTACGGATCCATCGAGGCGGGACAATCCGATAGTTT
TTGCTTCGGAGGAATTGGGAGCAGTGCAGCAGTCAGGGATGACCGTCGGG
ATGGCTCACCATTTATGAATCTCCTCCAATGTGCTCCACTATGCGACAGC
CATGGCAGAGTGCGGTACTTTATTGGTGCTCAGATCGATGTTAGTGGATT
GGTTATGGACGGCGTCCAGATGGAATCGCTGCGAGATTTGCAACAGCAAC
AGATGAGAGATGGTGTTGAAGTGACAGATGCACCCCTTGGGATCCAGAAA
GACGAGTTTCGTGATTTGAGTGAGCTATTCAGTCCACGCGAGTTGAAGGT
CACCCAAGATATTGGAGGAAGTCTCTTCCAGCCGGTGACTTCTCCGGCAT
TGCGCAATAGCTCCCGGACAAAGTGGTCTGTTGCCGATGGCGAGGATTCT
GTTGAGCCGAAGGCGAAAAGAGAGACAAGCATCATGACAGGTACAGCGTT
GGTGGGCGCTTACGAGAATAATTCCATCGCACGACACAGTATGGAATGGA
CTACGTGCTTGGTCGGAATTGTCGGTTTTTGCAGGGACCAAAGACAAATG
CGAATAGTGTGAGGAGAATTAAGGAGGCGATAGAAGCGGGGAGGCATCAT
TCAGAGTTGTTTCTGAATTAATGGACCACTTCGACGCAGGCTCGCTGCGC
TCCTACCCATCCACTGTCGCATTGGATAATTGCCCTCCCTCAAACGCGAT
TTCGCCATGGCGGTCATCCTCCTCTTCCGCTCCCACCATTGAAGATGAAT
CGCGAGAGGGGCACAGGCGACGGCCCAGCGAGATCCTCCTGGGATTCCCT
CGCCCTCCTAGCCGTGCACATGTCGCAACGAAAACCCTCATCTCGAGGCC
TTCTATCAAGACGCTTCGTAGGAATTTTATGATTCACGAGCTGCCCCTTC
TTCAACAGCCGAACCCGTACTATGACGAATCTGAAGAGTTCAATCCTGTC
TATGACCCTGGCTTATCCTATGATCTGATTGCACCATCGCACGATACAAA
CGAAGCTCCGCCGCTTCATGACCTTGAGCGTCTCGCTGATCTCGTATTCT
CATCGGAGCATATGCTCACCATTCTGAACAACCCGCGCTATCTTGCGCAA
TTTCGCGAATTCCTGCTTGAGGAACGTCCCCGCTCTCTCCATCGGTTGAC
TTATTATTTGACGGCGCGCAAGGCTCTCAAGGCAATAGACTACGCGAACG
GCTTGGTGCGATGCGTCGTCGATGATGCTCAGCCGAAATCATCAACGTCG
GGGTTGTTAGGACAGAAGATCGGAGAGATCGCCCACCCGGCACTGCAACA
ACGAGTACAGGAGGCTCTCAAGGTACTCACTGACGAGGAACTCCCTGCAT
TTATTACCTCGCGCTGCATCGGCATTACCAGCCGGGTAGTGGAGGAAAGG
GTCAGGGGGACCTTACCGAAAAGATTTCAAAGAACAGACGAGGAGAAGGG
GTTGGCGGAGGTATTCTGTCTTACGGATCCATCGAGGCGGGACAATCCGA
TAGTTTTTGCTTCGGAGGAATTGGGAGCAGTGCAGCAGTCAGGGATGACC
GTCGGGATGGCTCACCATTTATGAATCTCCTCCAATGTGCTCCACTATGC
GACAGCCATGGCAGAGTGCGGTACTTTATTGGTGCTCAGATCGATGTTAG
TGGATTGGTTATGGACGGCGTCCAGATGGAATCGCTGCGAGATTTGCAAC
AGCAACAGATGAGAGATGGTGTTGAAGTGACAGATGCACCCCTTGGGATC
CAGAAAGACGAGTTTCGTGATTTGAGTGAGCTATTCAGTCCACGCGAGTT
GAAGGTCACCCAAGATATTGGAGGAAGTCTCTTCCAGCCGGTGACTTCTC
CGGCATTGCGCAATAGCTCCCGGACAAAGTGGTCTGTTGCCGATGGCGAG
GATTCTGTTGAGCCGAAGGCGAAAAGAGAGACAAGCATCATGACAGGTAC
AGCGTTGGTGGGCGCTTACGAGAATAATTCCATCGCACGACACAGTATGG
AATGGACTACGTGCTTGGTCGGAATTGTCGGTTTTTGCAGGGACCAAAGA
CAAATGCGAATAGTGTGAGGAGAATTAAGGAGGCGATAGAAGCGGGGAGG
CATCATTCAGAGTTGTTTCTGAATTAATGGACCACTTCGACGCAGGCTCG
CTGCGCTCCTACCCATCCACTGTCGCATTGGATAATTGCCCTCCCTCAAA
CGCGATTTCGCCATGGCGGTCATCCTCCTCTTCCGCTCCCACCATTGAAG
ATGAATCGCGAGAGGGGCACAGGCGACGGCCCAGCGAGATCCTCCTGGGA
TTCCCTCGCCCTCCTAGCCGTGCACATGTCGCAACGAAAACCCTCATCTC
GAGGCCTTCTATCAAGACGCTTCGTAGGAATTTTATGATTCACGAGCTGC
CCCTTCTTCAACAGCCGAACCCGTACTATGACGAATCTGAAGAGTTCAAT
CCTGTCTATGACCCTGGCTTATCCTATGATCTGATTGCACCATCGCACGA
TACAAACGAAGCTCCGCCGCTTCATGACCTTGAGCGTCTCGCTGATCTCG
TATTCTCATCGGAGCATATGCTCACCATTCTGAACAACCCGCGCTATCTT
GCGCAATTTCGCGAATTCCTGCTTGAGGAACGTCCCCGCTCTCTCCATCG
GTTGACTTATTATTTGACGGCGCGCAAGGCTCTCAAGGCAATAGACTACG
CGAACGGCTTGGTGCGATGCGTCGTCGATGATGCTCAGCCGAAATCATCA
ACGTCGGGGTTGTTAGGACAGAAGATCGGAGAGATCGCCCACCCGGCACT
GCAACAACGAGTACAGGAGGCTCTCAAGGTACTCACTGACGAGGAACTCC
CTGCATTTATTACCTCGCGCTGCATCGGCATTACCAGCCGGGTAGTGGAG
GAAAGGGTCAGGGGGACCTTACCGAAAAGATTTCAAAGAACAGACGAGGA
GAAGGGGTTGGCGGAGGTATTCTGTCTTACGGATCCATCGAGGCGGGACA
ATCCGATAGTTTTTGCTTCGGAGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035965 |
| DBxref | InterPro:IPR000700 |
| DBxref | InterPro:IPR000014 |
| DBxref | PFAM:PF13426 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:823645..825415 - |
|
