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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:834463..836352- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006161-T1 ID=CBS51388_006161-T1|Name=CBS51388_006161-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1890bp|location=Sequence derived from alignment at An09:834463..836352- (Aspergillus niger CBS 513.88)
ATGCTTCAATGGAGCTCGCGCTGCCTTCCTGGGTTTAGCATTCTGCTACT
GATAGCCCTTCTTCTCCTGGCTTTCTTCGATAATGCGGACTGGAACCTCA
GGAAAGGTCTGAGGCCATCGCCACCTAGGAAACCGGGTCATGATCCCAAC
CGTGTACTGACCTTGGCGCAAGCCTTGTTTTCCATATACACTGTGGTAAT
TCACCTGAACATGTTTTCCTTCACACTCCGACTTACATGGTCGCTGTTCT
GGGTGACAAGGCGAACGCGGCAGGTTTTCCAAAGGCGCATCTGGTCCAAT
GCGAGCAAACTGGACTCTACAGGCGACAACCTTCTGGATCTCAGCACCTT
GCAGGGCTCAGCCAGAGAGCGGACCATACCACACTCACGGGGTATAGACA
TTATTCACGCCATTATTGTGCCCAACTACCGTGAGGACGTGGACACCCTT
CGAACTACTTTAAGCGTATTGGCAAGCCATCCACATGCAAGATTTCACTA
TGAGGTCTGGCCTAGTCTGGAATGTGGTCGCCGCTGAATGATGCTTACTC
GTTTTAGATCTACCTTGCCATGGAGGAGAAAGAGTCAAATGCCGTCGAAA
AGGCAATGAAGCTAGCTGCCACTTTCGATGCCTCGTTCCGCACCATTCAA
ACCACATTTCATCCTTCTGGAATTGACGGTGAGATTTCCGGCAAGGGTTC
CAACGTGGCATATGCAGCACGTCATATTGTCGGTGTCCACCATAAGACCC
TGCGCATGGAAACTTGTAATGTTATCATCACAGTCATAGATGGTACGCCG
ATCTTCCATTCATTCCCTCTTCCAGCCTAGTTACTGACCTAGGGGTAAAG
CCGATACCCATCTTTCCAGGGATTACTTCACCGAGATACAACGCATTCGT
GATTTGAATCTTCTGGAGGCTGAGCGTACCCTATACTGCTGCCCCATCAT
ATTTGATCGAAATTCAGTCGAAAGTCCCGTCCTAGTGCGATGTGCCGATC
TCCTTTGGGGATTCGCCGGCCTATCCACCATGTACCCAGGGACCGTGCTT
GCTATTCCCACGTCAGTTTACTCGTTACCGCTATCCCTAGCAGAAAAGGT
TGGGGGATGGGATAGCGATCCAACGGCGATTGGAGAGGACATGCACATGC
TGCTGAAGTGCTACTTTGAGACTTCGGGTAACTTGATAACACAGGCCATC
TATGTCCCCGCCAGTCAGTGTAATGTTTCGAGCGACACTCGCCGAGGATG
GCGGTGCTACCTAGATACATGCGTTGCTCGATACAGACAAGCGCTGCGAC
ACATGTGGGGGGCTCTAGATTCAGGATATGCGGTACGACGGACGATGGGC
CATCTGCGCTTCCGACGTTGCTTTGTCCTGCGGCCACGCCAGCTAGCTCT
CACCCACCTCCTCTGGGAGGCTCATTTCCTGCCCTGCCATGTCACGATCC
TTCTGGTGTTCTCCGTGTTCTATACCATATGCAACCCCAGTGGCCATATG
CACCCGACCTTGGCATTCGCATTCAACTTCACCAATACCCTTCGTACTTG
CTCGTTCGTCGGCATGAACTTGGCTATCTCGCTATACGACCGCTGGCATC
AGATCTGTGTTGACCGGCGCATGCAGGACATGCATGCCGCTCAAATTCCC
GGCACTGGCTGCTCACGACGCAAGTGGTACATGCCACAATGTCTGCTGGA
GCGAGTTATCTTTCCCATTTCCGGCACACTGTATGGCGCCATCCCCACGT
TACAGGCCGCTTTCTCGCATTTTTGGACTGATCGGCTGGAGTACCGGGTG
AGTAAAAAGCCTAGCTTTGAGGCCGAGTACGTGGCCGAAGCGCCGATCTG
CGCACCGGTCCATGTTCATGTTGCTACTGAGTGTGCTTGA back to topCoding sequence (CDS) from alignment at An09:834463..836352- >CBS51388_006161-T1 ID=CBS51388_006161-T1|Name=CBS51388_006161-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4986bp|location=Sequence derived from alignment at An09:834463..836352- (Aspergillus niger CBS 513.88)
TCGAAAGTCCCGTCCTAGTGCGATGTGCCGATCTCCTTTGGGGATTCGCC
GGCCTATCCACCATGTACCCAGGGACCGTGCTTGCTATTCCCACGTCAGT
TTACTCGTTACCGCTATCCCTAGCAGAAAAGGTTGGGGGATGGGATAGCG
ATCCAACGGCGATTGGAGAGGACATGCACATGCTGCTGAAGTGCTACTTT
GAGACTTCGGGTAACTTGATAACACAGGCCATCTATGTCCCCGCCAGTCA
GTGTAATGTTTCGAGCGACACTCGCCGAGGATGGCGGTGCTACCTAGATA
CATGCGTTGCTCGATACAGACAAGCGCTGCGACACATGTGGGGGGCTCTA
GATTCAGGATATGCGGTACGACGGACGATGGGCCATCTGCGCTTCCGACG
TTGCTTTGTCCTGCGGCCACGCCAGCTAGCTCTCACCCACCTCCTCTGGG
AGGCTCATTTCCTGCCCTGCCATGTCACGATCCTTCTGGTGTTCTCCGTG
TTCTATACCATATGCAACCCCAGTGGCCATATGCACCCGACCTTGGCATT
CGCATTCAACTTCACCAATACCCTTCGTACTTGCTCGTTCGTCGGCATGA
ACTTGGCTATCTCGCTATACGACCGCTGGCATCAGATCTGTGTTGACCGG
CGCATGCAGGACATGCATGCCGCTCAAATTCCCGGCACTGGCTGCTCACG
ACGCAAGTGGTACATGCCACAATGTCTGCTGGAGCGAGTTATCTTTCCCA
TTTCCGGCACACTGTATGGCGCCATCCCCACGTTACAGGCCGCTTTCTCG
CATTTTTGGACTGATCGGCTGGAGTACCGGGTGAGTAAAAAGCCTAGCTT
TGAGGCCGAGTACGTGGCCGAAGCGCCGATCTGCGCACCGGTCCATGTTC
ATGTTGCTACTGAGTGTGCTTGAATCTACCTTGCCATGGAGGAGAAAGAG
TCAAATGCCGTCGAAAAGGCAATGAAGCTAGCTGCCACTTTCGATGCCTC
GTTCCGCACCATTCAAACCACATTTCATCCTTCTGGAATTGACGGTGAGA
TTTCCGGCAAGGGTTCCAACGTGGCATATGCAGCACGTCATATTGTCGGT
GTCCACCATAAGACCCTGCGCATGGAAACTTGTAATGTTATCATCACAGT
CATAGATGATGCTTCAATGGAGCTCGCGCTGCCTTCCTGGGTTTAGCATT
CTGCTACTGATAGCCCTTCTTCTCCTGGCTTTCTTCGATAATGCGGACTG
GAACCTCAGGAAAGGTCTGAGGCCATCGCCACCTAGGAAACCGGGTCATG
ATCCCAACCGTGTACTGACCTTGGCGCAAGCCTTGTTTTCCATATACACT
GTGGTAATTCACCTGAACATGTTTTCCTTCACACTCCGACTTACATGGTC
GCTGTTCTGGGTGACAAGGCGAACGCGGCAGGTTTTCCAAAGGCGCATCT
GGTCCAATGCGAGCAAACTGGACTCTACAGGCGACAACCTTCTGGATCTC
AGCACCTTGCAGGGCTCAGCCAGAGAGCGGACCATACCACACTCACGGGG
TATAGACATTATTCACGCCATTATTGTGCCCAACTACCGTGAGGACGTGG
ACACCCTTCGAACTACTTTAAGCGTATTGGCAAGCCATCCACATGCAAGA
TTTCACTATGAGTCGAAAGTCCCGTCCTAGTGCGATGTGCCGATCTCCTT
TGGGGATTCGCCGGCCTATCCACCATGTACCCAGGGACCGTGCTTGCTAT
TCCCACGTCAGTTTACTCGTTACCGCTATCCCTAGCAGAAAAGGTTGGGG
GATGGGATAGCGATCCAACGGCGATTGGAGAGGACATGCACATGCTGCTG
AAGTGCTACTTTGAGACTTCGGGTAACTTGATAACACAGGCCATCTATGT
CCCCGCCAGTCAGTGTAATGTTTCGAGCGACACTCGCCGAGGATGGCGGT
GCTACCTAGATACATGCGTTGCTCGATACAGACAAGCGCTGCGACACATG
TGGGGGGCTCTAGATTCAGGATATGCGGTACGACGGACGATGGGCCATCT
GCGCTTCCGACGTTGCTTTGTCCTGCGGCCACGCCAGCTAGCTCTCACCC
ACCTCCTCTGGGAGGCTCATTTCCTGCCCTGCCATGTCACGATCCTTCTG
GTGTTCTCCGTGTTCTATACCATATGCAACCCCAGTGGCCATATGCACCC
GACCTTGGCATTCGCATTCAACTTCACCAATACCCTTCGTACTTGCTCGT
TCGTCGGCATGAACTTGGCTATCTCGCTATACGACCGCTGGCATCAGATC
TGTGTTGACCGGCGCATGCAGGACATGCATGCCGCTCAAATTCCCGGCAC
TGGCTGCTCACGACGCAAGTGGTACATGCCACAATGTCTGCTGGAGCGAG
TTATCTTTCCCATTTCCGGCACACTGTATGGCGCCATCCCCACGTTACAG
GCCGCTTTCTCGCATTTTTGGACTGATCGGCTGGAGTACCGGGTGAGTAA
AAAGCCTAGCTTTGAGGCCGAGTACGTGGCCGAAGCGCCGATCTGCGCAC
CGGTCCATGTTCATGTTGCTACTGAGTGTGCTTGAATCTACCTTGCCATG
GAGGAGAAAGAGTCAAATGCCGTCGAAAAGGCAATGAAGCTAGCTGCCAC
TTTCGATGCCTCGTTCCGCACCATTCAAACCACATTTCATCCTTCTGGAA
TTGACGGTGAGATTTCCGGCAAGGGTTCCAACGTGGCATATGCAGCACGT
CATATTGTCGGTGTCCACCATAAGACCCTGCGCATGGAAACTTGTAATGT
TATCATCACAGTCATAGATGATGCTTCAATGGAGCTCGCGCTGCCTTCCT
GGGTTTAGCATTCTGCTACTGATAGCCCTTCTTCTCCTGGCTTTCTTCGA
TAATGCGGACTGGAACCTCAGGAAAGGTCTGAGGCCATCGCCACCTAGGA
AACCGGGTCATGATCCCAACCGTGTACTGACCTTGGCGCAAGCCTTGTTT
TCCATATACACTGTGGTAATTCACCTGAACATGTTTTCCTTCACACTCCG
ACTTACATGGTCGCTGTTCTGGGTGACAAGGCGAACGCGGCAGGTTTTCC
AAAGGCGCATCTGGTCCAATGCGAGCAAACTGGACTCTACAGGCGACAAC
CTTCTGGATCTCAGCACCTTGCAGGGCTCAGCCAGAGAGCGGACCATACC
ACACTCACGGGGTATAGACATTATTCACGCCATTATTGTGCCCAACTACC
GTGAGGACGTGGACACCCTTCGAACTACTTTAAGCGTATTGGCAAGCCAT
CCACATGCAAGATTTCACTATGAGTCGAAAGTCCCGTCCTAGTGCGATGT
GCCGATCTCCTTTGGGGATTCGCCGGCCTATCCACCATGTACCCAGGGAC
CGTGCTTGCTATTCCCACGTCAGTTTACTCGTTACCGCTATCCCTAGCAG
AAAAGGTTGGGGGATGGGATAGCGATCCAACGGCGATTGGAGAGGACATG
CACATGCTGCTGAAGTGCTACTTTGAGACTTCGGGTAACTTGATAACACA
GGCCATCTATGTCCCCGCCAGTCAGTGTAATGTTTCGAGCGACACTCGCC
GAGGATGGCGGTGCTACCTAGATACATGCGTTGCTCGATACAGACAAGCG
CTGCGACACATGTGGGGGGCTCTAGATTCAGGATATGCGGTACGACGGAC
GATGGGCCATCTGCGCTTCCGACGTTGCTTTGTCCTGCGGCCACGCCAGC
TAGCTCTCACCCACCTCCTCTGGGAGGCTCATTTCCTGCCCTGCCATGTC
ACGATCCTTCTGGTGTTCTCCGTGTTCTATACCATATGCAACCCCAGTGG
CCATATGCACCCGACCTTGGCATTCGCATTCAACTTCACCAATACCCTTC
GTACTTGCTCGTTCGTCGGCATGAACTTGGCTATCTCGCTATACGACCGC
TGGCATCAGATCTGTGTTGACCGGCGCATGCAGGACATGCATGCCGCTCA
AATTCCCGGCACTGGCTGCTCACGACGCAAGTGGTACATGCCACAATGTC
TGCTGGAGCGAGTTATCTTTCCCATTTCCGGCACACTGTATGGCGCCATC
CCCACGTTACAGGCCGCTTTCTCGCATTTTTGGACTGATCGGCTGGAGTA
CCGGGTGAGTAAAAAGCCTAGCTTTGAGGCCGAGTACGTGGCCGAAGCGC
CGATCTGCGCACCGGTCCATGTTCATGTTGCTACTGAGTGTGCTTGAATC
TACCTTGCCATGGAGGAGAAAGAGTCAAATGCCGTCGAAAAGGCAATGAA
GCTAGCTGCCACTTTCGATGCCTCGTTCCGCACCATTCAAACCACATTTC
ATCCTTCTGGAATTGACGGTGAGATTTCCGGCAAGGGTTCCAACGTGGCA
TATGCAGCACGTCATATTGTCGGTGTCCACCATAAGACCCTGCGCATGGA
AACTTGTAATGTTATCATCACAGTCATAGATGATGCTTCAATGGAGCTCG
CGCTGCCTTCCTGGGTTTAGCATTCTGCTACTGATAGCCCTTCTTCTCCT
GGCTTTCTTCGATAATGCGGACTGGAACCTCAGGAAAGGTCTGAGGCCAT
CGCCACCTAGGAAACCGGGTCATGATCCCAACCGTGTACTGACCTTGGCG
CAAGCCTTGTTTTCCATATACACTGTGGTAATTCACCTGAACATGTTTTC
CTTCACACTCCGACTTACATGGTCGCTGTTCTGGGTGACAAGGCGAACGC
GGCAGGTTTTCCAAAGGCGCATCTGGTCCAATGCGAGCAAACTGGACTCT
ACAGGCGACAACCTTCTGGATCTCAGCACCTTGCAGGGCTCAGCCAGAGA
GCGGACCATACCACACTCACGGGGTATAGACATTATTCACGCCATTATTG
TGCCCAACTACCGTGAGGACGTGGACACCCTTCGAACTACTTTAAGCGTA
TTGGCAAGCCATCCACATGCAAGATTTCACTATGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT2_Glyco_trans_2_3 |
| DBxref | InterPro:IPR029044 |
| DBxref | InterPro:IPR001173 |
| DBxref | PFAM:PF13632 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:834463..836352 - |
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