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CBS51388_006172-T1, CBS51388_006172-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006172-T1
Unique NameCBS51388_006172-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:864645..866221+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006172-T1 ID=CBS51388_006172-T1|Name=CBS51388_006172-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1577bp|location=Sequence derived from alignment at An09:864645..866221+ (Aspergillus niger CBS 513.88)
ATGACTGTCGTCGACCCTACGGCCCAGCCGCCACCATCTCGACCAGCAGA
TGCAGAAAAGGGCAAGGCCGGACATGCAGGCGGCCCCGAGCCTAACCTAG
TGACATGGGAGGAAAACGACCCCGAAAATCCACATAACTTCTCGACGGCG
TACAAATGCTGGATCACGTTTCAGCTGGGTTTATTGGCGTTGAGCGCCAG
TCTGGGATCCAGTATTATTTCCCCGGCGGAGACGGAACTCAAGGCTTATT
TGAAGATTGGCACGGAAGTTAGTATTCTTCCGGTGTCGCTTTATATGTAT
GTAAATCACTGGAATTAAATTATCCGCGAAGGGATAGAAGCTTTTTCTCT
CGACAATTATATACTAACAAAGATACCAGTCTCGGCTTCGCCTTCGGCCC
CCTATGCTGGGCGCCCATCTCCGAGCTCTTCGGCCGACGATGGTCGATGC
TGCCCGCGGTATTCATCCTGGGACTGTTCAGCATCGGCACCGCAACCAGC
AAAAACACCGCCTCAGTTCTCATCACCCGGTACTTCGCGGGCCTGTTCGG
CTCCGCACCAGTCAGTAATGTCTCCGCCGCGCTCGGCGACATCTTCCACA
TGAAGGCGCGCGGCATCGCCAGCACCTCGTACGCCATCTGCGTCGTCGGC
GGCCCAACCATGGGACCCATCATCGGGGCTGCGCTGGTCTCGAATCCGCA
CCTAGGGTGGCGCTGGACCGAGTACATCGAAGCCATCATCGTGTTCTTCA
TCTTCGGTATCACCTTCTTCTGTCTGCCGGAGGTATACGGCCCCGTGCTG
CTGCATCGTAAGGCGGTGCGTATGCGCAAGGAGACCGGGAATGACGAACT
GTATCATCCGCACGAGCATATCAAGGTGGACGTGCATAGTATCGTCACGA
AGCATTTTTCGCGTCCGCTGGTCATGCTTGTTACGGAACCGATGGTTACG
GTGATTGCGCTGTATGCGTCGTTTACGTATGCGTTGCTGTATCTCACCTT
GGAGGTGTTCCCTATTGTTTTTGATGATATTCGCCAGTGGAAACCTGTGG
TTGCTACGCTGCCGTTCATCGGCCTGTTCGTCGGCGTGCTGCTATCCTCT
GCATTCATTATCTTCATCGGCCAGCCGTACTACATCCGCAAGTGGGAGGA
AGGTGGCGGTAAGCCTGTGCCGGAGGCGCGTCTGATGCCCATGGCTGTTG
GGGGGTTCTTGTTCGCGGGTGGTCTGTTCTGGTTTGGGTGGACGGCTGAG
CCTAAGTATTCATGGGGGTTGCCGGTTGTGGCGGCGATGGTGTTTGGATG
TGGGTTTTGTATTATCTTTGGGCAGTGTATCAACTTTCTGGTCGATACGT
ATGGGCCTTATGCGGCGTCGGCGACGGCTTCGAATACTTTCCTGCGGAGT
GTGTTGGCTGCTGCATTTCCGCTGTTCTCGCAGCCGATGTTTCGCAATTT
GGGGGTTGGGCCGGCCATGTCCATTTTGGGGGGCGTCGCCGCGGCGGCGA
TCCCGGTGCCGTTTTTGTTCATGATTTACGGGGTCAGGTTGAGGAAGATG
TCGAGGTTTGCGCCGTTTAAGGGGTAG
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Coding sequence (CDS) from alignment at An09:864645..866221+

>CBS51388_006172-T1 ID=CBS51388_006172-T1|Name=CBS51388_006172-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2988bp|location=Sequence derived from alignment at An09:864645..866221+ (Aspergillus niger CBS 513.88)
ATGACTGTCGTCGACCCTACGGCCCAGCCGCCACCATCTCGACCAGCAGA
TGCAGAAAAGGGCAAGGCCGGACATGCAGGCGGCCCCGAGCCTAACCTAG
TGACATGGGAGGAAAACGACCCCGAAAATCCACATAACTTCTCGACGGCG
TACAAATGCTGGATCACGTTTCAGCTGGGTTTATTGGCGTTGAGCGCCAG
TCTGGGATCCAGTATTATTTCCCCGGCGGAGACGGAACTCAAGGCTTATT
TGAAGATTGGCACGGAAGTTAGTATTCTTCCGGTGTCGCTTTATATTCTC
GGCTTCGCCTTCGGCCCCCTATGCTGGGCGCCCATCTCCGAGCTCTTCGG
CCGACGATGGTCGATGCTGCCCGCGGTATTCATCCTGGGACTGTTCAGCA
TCGGCACCGCAACCAGCAAAAACACCGCCTCAGTTCTCATCACCCGGTAC
TTCGCGGGCCTGTTCGGCTCCGCACCAGTCAGTAATGTCTCCGCCGCGCT
CGGCGACATCTTCCACATGAAGGCGCGCGGCATCGCCAGCACCTCGTACG
CCATCTGCGTCGTCGGCGGCCCAACCATGGGACCCATCATCGGGGCTGCG
CTGGTCTCGAATCCGCACCTAGGGTGGCGCTGGACCGAGTACATCGAAGC
CATCATCGTGTTCTTCATCTTCGGTATCACCTTCTTCTGTCTGCCGGAGG
TATACGGCCCCGTGCTGCTGCATCGTAAGGCGGTGCGTATGCGCAAGGAG
ACCGGGAATGACGAACTGTATCATCCGCACGAGCATATCAAGGTGGACGT
GCATAGTATCGTCACGAAGCATTTTTCGCGTCCGCTGGTCATGCTTGTTA
CGGAACCGATGGTTACGGTGATTGCGCTGTATGCGTCGTTTACGTATGCG
TTGCTGTATCTCACCTTGGAGGTGTTCCCTATTGTTTTTGATGATATTCG
CCAGTGGAAACCTGTGGTTGCTACGCTGCCGTTCATCGGCCTGTTCGTCG
GCGTGCTGCTATCCTCTGCATTCATTATCTTCATCGGCCAGCCGTACTAC
ATCCGCAAGTGGGAGGAAGGTGGCGGTAAGCCTGTGCCGGAGGCGCGTCT
GATGCCCATGGCTGTTGGGGGGTTCTTGTTCGCGGGTGGTCTGTTCTGGT
TTGGGTGGACGGCTGAGCCTAAGTATTCATGGGGGTTGCCGGTTGTGGCG
GCGATGGTGTTTGGATGTGGGTTTTGTATTATCTTTGGGCAGTGTATCAA
CTTTCTGGTCGATACGTATGGGCCTTATGCGGCGTCGGCGACGGCTTCGA
ATACTTTCCTGCGGAGTGTGTTGGCTGCTGCATTTCCGCTGTTCTCGCAG
CCGATGTTTCGCAATTTGGGGGTTGGGCCGGCCATGTCCATTTTGGGGGG
CGTCGCCGCGGCGGCGATCCCGGTGCCGTTTTTGTTCATGATTTACGGGG
TCAGGTTGAGGAAGATGTCGAGGTTTGCGCCGTTTAAGGGGTAGATGACT
GTCGTCGACCCTACGGCCCAGCCGCCACCATCTCGACCAGCAGATGCAGA
AAAGGGCAAGGCCGGACATGCAGGCGGCCCCGAGCCTAACCTAGTGACAT
GGGAGGAAAACGACCCCGAAAATCCACATAACTTCTCGACGGCGTACAAA
TGCTGGATCACGTTTCAGCTGGGTTTATTGGCGTTGAGCGCCAGTCTGGG
ATCCAGTATTATTTCCCCGGCGGAGACGGAACTCAAGGCTTATTTGAAGA
TTGGCACGGAAGTTAGTATTCTTCCGGTGTCGCTTTATATTCTCGGCTTC
GCCTTCGGCCCCCTATGCTGGGCGCCCATCTCCGAGCTCTTCGGCCGACG
ATGGTCGATGCTGCCCGCGGTATTCATCCTGGGACTGTTCAGCATCGGCA
CCGCAACCAGCAAAAACACCGCCTCAGTTCTCATCACCCGGTACTTCGCG
GGCCTGTTCGGCTCCGCACCAGTCAGTAATGTCTCCGCCGCGCTCGGCGA
CATCTTCCACATGAAGGCGCGCGGCATCGCCAGCACCTCGTACGCCATCT
GCGTCGTCGGCGGCCCAACCATGGGACCCATCATCGGGGCTGCGCTGGTC
TCGAATCCGCACCTAGGGTGGCGCTGGACCGAGTACATCGAAGCCATCAT
CGTGTTCTTCATCTTCGGTATCACCTTCTTCTGTCTGCCGGAGGTATACG
GCCCCGTGCTGCTGCATCGTAAGGCGGTGCGTATGCGCAAGGAGACCGGG
AATGACGAACTGTATCATCCGCACGAGCATATCAAGGTGGACGTGCATAG
TATCGTCACGAAGCATTTTTCGCGTCCGCTGGTCATGCTTGTTACGGAAC
CGATGGTTACGGTGATTGCGCTGTATGCGTCGTTTACGTATGCGTTGCTG
TATCTCACCTTGGAGGTGTTCCCTATTGTTTTTGATGATATTCGCCAGTG
GAAACCTGTGGTTGCTACGCTGCCGTTCATCGGCCTGTTCGTCGGCGTGC
TGCTATCCTCTGCATTCATTATCTTCATCGGCCAGCCGTACTACATCCGC
AAGTGGGAGGAAGGTGGCGGTAAGCCTGTGCCGGAGGCGCGTCTGATGCC
CATGGCTGTTGGGGGGTTCTTGTTCGCGGGTGGTCTGTTCTGGTTTGGGT
GGACGGCTGAGCCTAAGTATTCATGGGGGTTGCCGGTTGTGGCGGCGATG
GTGTTTGGATGTGGGTTTTGTATTATCTTTGGGCAGTGTATCAACTTTCT
GGTCGATACGTATGGGCCTTATGCGGCGTCGGCGACGGCTTCGAATACTT
TCCTGCGGAGTGTGTTGGCTGCTGCATTTCCGCTGTTCTCGCAGCCGATG
TTTCGCAATTTGGGGGTTGGGCCGGCCATGTCCATTTTGGGGGGCGTCGC
CGCGGCGGCGATCCCGGTGCCGTTTTTGTTCATGATTTACGGGGTCAGGT
TGAGGAAGATGTCGAGGTTTGCGCCGTTTAAGGGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006172CBS51388_006172Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006172-T1.exon1CBS51388_006172-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006172-T1.exon2CBS51388_006172-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006172-T1.cdsCBS51388_006172-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006172-T1CBS51388_006172-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:864645..866221 +
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