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CBS51388_006213-T1, CBS51388_006213-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006213-T1
Unique NameCBS51388_006213-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:961792..963131+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006213-T1 ID=CBS51388_006213-T1|Name=CBS51388_006213-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1340bp|location=Sequence derived from alignment at An09:961792..963131+ (Aspergillus niger CBS 513.88)
ATGAGTTTGAAGGGCTTTCAGAAGAGCATTGTCCGCGCTCCACAACAGTT
CAAGGCCAAGTTCAATATTGGCGAGCATACCAAGGACCCTGTCTACCTGG
ACGCTGAGCGACGATTTCAAGAACTCGAAAAGGAGACCAAGAAGCTGCAC
GATGAGTCCAAGAAGTACTTCGATGCCATCAACGGTACACACGGATCCCC
CGTCTCGCAGCTACCCCTCCTTTTGCTGACTGGCGTATTTTTCCAGGCAT
GTTGAACCACCAGATTGGATTCTCCAAAGCGATGACGGAACTCTACAAAC
CCATCTCCGGTCGTGCTTCCGACCCTAGCTCCTATACAATCGAGGGTAAT
CCGGAGGGTATCCGGGCATGTGAGGAATACGAGGCGATTGTGCGGGACCT
CCAAGAATCGCTGGTGCCCGAGTTAGAGATGATCGACACCCGCGTCATCA
GCCCTGCACAGCAGCTATTGGAGGTAATCAAGGTGATCCGCAAAGTCGCG
GTGAAGCGAGACCACAAGAAACTGGACTACGACCGCCACAAGAACTCGCT
CAAGAAGCTTCAGGATAAAAAGGACAAGTCACTGAAGGATGAGAAGGCGC
TTTACAAGGCAGAAAATGATGTGGAACAAGCGACTCAGGACTACAACTAC
TACAACGACCTGCTCAAGGACGAGTTGCCCAAGCTGTTCGCTCTGGAGGC
TGAATTCATCCGTCCTCTGTTCCAGTCCTTCTACTACATGCAACTGAACG
TCTTCTACACACTACACGAGCGAATGCAGGGCATCAATATCGGTTACTTC
GACCTGAATCTGGACATCGAGGAAGCGTTCGAGAACAAGCGCGGAGACGT
CAAGGAGCGCGCCGAGGAGCTCAGCATCGTCCACTTTAAAGCCACGGGCG
GGCGCAAACCCGGCTCGAAGCTTGGCCCCAAGGACAAACTGGCGCAAGAG
GGCAAGAGTGGTTACGCCTCACGTCAGCGAGATCCCGATGTTGTCGAAAA
CCCCCCGCCGCCTTACTCTGCCACTGCAGGCAGCAGCTTTACCGCCGCAG
CGAAGAGCAAGCCCGCCCCTCCGCCGCCGAAACCGAAGCCCGCTCGTTTC
AGCGCTCCCGTCGAAACCGTCACGGCACTATATGACTATGAGGCCCAGGC
GCACGGCGACCTCAGCTTCTCCGCCGGGGATGTCATCGAGATCACACAGC
GAACGGATAACCAGAATGAGTGGTGGAGCGGCCGTGTTGACGGACGAGAG
GGACAATTTCCTGGTGAGCATGACCGGCTGTCATTATCAAAACATACCTC
GCTAACTTGTATTCCAGCAAACTACGTCCAGCTGAACTAG
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Coding sequence (CDS) from alignment at An09:961792..963131+

>CBS51388_006213-T1 ID=CBS51388_006213-T1|Name=CBS51388_006213-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3672bp|location=Sequence derived from alignment at An09:961792..963131+ (Aspergillus niger CBS 513.88)
ATGAGTTTGAAGGGCTTTCAGAAGAGCATTGTCCGCGCTCCACAACAGTT
CAAGGCCAAGTTCAATATTGGCGAGCATACCAAGGACCCTGTCTACCTGG
ACGCTGAGCGACGATTTCAAGAACTCGAAAAGGAGACCAAGAAGCTGCAC
GATGAGTCCAAGAAGTACTTCGATGCCATCAACGGCATGTTGAACCACCA
GATTGGATTCTCCAAAGCGATGACGGAACTCTACAAACCCATCTCCGGTC
GTGCTTCCGACCCTAGCTCCTATACAATCGAGGGTAATCCGGAGGGTATC
CGGGCATGTGAGGAATACGAGGCGATTGTGCGGGACCTCCAAGAATCGCT
GGTGCCCGAGTTAGAGATGATCGACACCCGCGTCATCAGCCCTGCACAGC
AGCTATTGGAGGTAATCAAGGTGATCCGCAAAGTCGCGGTGAAGCGAGAC
CACAAGAAACTGGACTACGACCGCCACAAGAACTCGCTCAAGAAGCTTCA
GGATAAAAAGGACAAGTCACTGAAGGATGAGAAGGCGCTTTACAAGGCAG
AAAATGATGTGGAACAAGCGACTCAGGACTACAACTACTACAACGACCTG
CTCAAGGACGAGTTGCCCAAGCTGTTCGCTCTGGAGGCTGAATTCATCCG
TCCTCTGTTCCAGTCCTTCTACTACATGCAACTGAACGTCTTCTACACAC
TACACGAGCGAATGCAGGGCATCAATATCGGTTACTTCGACCTGAATCTG
GACATCGAGGAAGCGTTCGAGAACAAGCGCGGAGACGTCAAGGAGCGCGC
CGAGGAGCTCAGCATCGTCCACTTTAAAGCCACGGGCGGGCGCAAACCCG
GCTCGAAGCTTGGCCCCAAGGACAAACTGGCGCAAGAGGGCAAGAGTGGT
TACGCCTCACGTCAGCGAGATCCCGATGTTGTCGAAAACCCCCCGCCGCC
TTACTCTGCCACTGCAGGCAGCAGCTTTACCGCCGCAGCGAAGAGCAAGC
CCGCCCCTCCGCCGCCGAAACCGAAGCCCGCTCGTTTCAGCGCTCCCGTC
GAAACCGTCACGGCACTATATGACTATGAGGCCCAGGCGCACGGCGACCT
CAGCTTCTCCGCCGGGGATGTCATCGAGATCACACAGCGAACGGATAACC
AGAATGAGTGGTGGAGCGGCCGTGTTGACGGACGAGAGGGACAATTTCCT
GCAAACTACGTCCAGCTGAACTAGATGAGTTTGAAGGGCTTTCAGAAGAG
CATTGTCCGCGCTCCACAACAGTTCAAGGCCAAGTTCAATATTGGCGAGC
ATACCAAGGACCCTGTCTACCTGGACGCTGAGCGACGATTTCAAGAACTC
GAAAAGGAGACCAAGAAGCTGCACGATGAGTCCAAGAAGTACTTCGATGC
CATCAACGGCATGTTGAACCACCAGATTGGATTCTCCAAAGCGATGACGG
AACTCTACAAACCCATCTCCGGTCGTGCTTCCGACCCTAGCTCCTATACA
ATCGAGGGTAATCCGGAGGGTATCCGGGCATGTGAGGAATACGAGGCGAT
TGTGCGGGACCTCCAAGAATCGCTGGTGCCCGAGTTAGAGATGATCGACA
CCCGCGTCATCAGCCCTGCACAGCAGCTATTGGAGGTAATCAAGGTGATC
CGCAAAGTCGCGGTGAAGCGAGACCACAAGAAACTGGACTACGACCGCCA
CAAGAACTCGCTCAAGAAGCTTCAGGATAAAAAGGACAAGTCACTGAAGG
ATGAGAAGGCGCTTTACAAGGCAGAAAATGATGTGGAACAAGCGACTCAG
GACTACAACTACTACAACGACCTGCTCAAGGACGAGTTGCCCAAGCTGTT
CGCTCTGGAGGCTGAATTCATCCGTCCTCTGTTCCAGTCCTTCTACTACA
TGCAACTGAACGTCTTCTACACACTACACGAGCGAATGCAGGGCATCAAT
ATCGGTTACTTCGACCTGAATCTGGACATCGAGGAAGCGTTCGAGAACAA
GCGCGGAGACGTCAAGGAGCGCGCCGAGGAGCTCAGCATCGTCCACTTTA
AAGCCACGGGCGGGCGCAAACCCGGCTCGAAGCTTGGCCCCAAGGACAAA
CTGGCGCAAGAGGGCAAGAGTGGTTACGCCTCACGTCAGCGAGATCCCGA
TGTTGTCGAAAACCCCCCGCCGCCTTACTCTGCCACTGCAGGCAGCAGCT
TTACCGCCGCAGCGAAGAGCAAGCCCGCCCCTCCGCCGCCGAAACCGAAG
CCCGCTCGTTTCAGCGCTCCCGTCGAAACCGTCACGGCACTATATGACTA
TGAGGCCCAGGCGCACGGCGACCTCAGCTTCTCCGCCGGGGATGTCATCG
AGATCACACAGCGAACGGATAACCAGAATGAGTGGTGGAGCGGCCGTGTT
GACGGACGAGAGGGACAATTTCCTGCAAACTACGTCCAGCTGAACTAGAT
GAGTTTGAAGGGCTTTCAGAAGAGCATTGTCCGCGCTCCACAACAGTTCA
AGGCCAAGTTCAATATTGGCGAGCATACCAAGGACCCTGTCTACCTGGAC
GCTGAGCGACGATTTCAAGAACTCGAAAAGGAGACCAAGAAGCTGCACGA
TGAGTCCAAGAAGTACTTCGATGCCATCAACGGCATGTTGAACCACCAGA
TTGGATTCTCCAAAGCGATGACGGAACTCTACAAACCCATCTCCGGTCGT
GCTTCCGACCCTAGCTCCTATACAATCGAGGGTAATCCGGAGGGTATCCG
GGCATGTGAGGAATACGAGGCGATTGTGCGGGACCTCCAAGAATCGCTGG
TGCCCGAGTTAGAGATGATCGACACCCGCGTCATCAGCCCTGCACAGCAG
CTATTGGAGGTAATCAAGGTGATCCGCAAAGTCGCGGTGAAGCGAGACCA
CAAGAAACTGGACTACGACCGCCACAAGAACTCGCTCAAGAAGCTTCAGG
ATAAAAAGGACAAGTCACTGAAGGATGAGAAGGCGCTTTACAAGGCAGAA
AATGATGTGGAACAAGCGACTCAGGACTACAACTACTACAACGACCTGCT
CAAGGACGAGTTGCCCAAGCTGTTCGCTCTGGAGGCTGAATTCATCCGTC
CTCTGTTCCAGTCCTTCTACTACATGCAACTGAACGTCTTCTACACACTA
CACGAGCGAATGCAGGGCATCAATATCGGTTACTTCGACCTGAATCTGGA
CATCGAGGAAGCGTTCGAGAACAAGCGCGGAGACGTCAAGGAGCGCGCCG
AGGAGCTCAGCATCGTCCACTTTAAAGCCACGGGCGGGCGCAAACCCGGC
TCGAAGCTTGGCCCCAAGGACAAACTGGCGCAAGAGGGCAAGAGTGGTTA
CGCCTCACGTCAGCGAGATCCCGATGTTGTCGAAAACCCCCCGCCGCCTT
ACTCTGCCACTGCAGGCAGCAGCTTTACCGCCGCAGCGAAGAGCAAGCCC
GCCCCTCCGCCGCCGAAACCGAAGCCCGCTCGTTTCAGCGCTCCCGTCGA
AACCGTCACGGCACTATATGACTATGAGGCCCAGGCGCACGGCGACCTCA
GCTTCTCCGCCGGGGATGTCATCGAGATCACACAGCGAACGGATAACCAG
AATGAGTGGTGGAGCGGCCGTGTTGACGGACGAGAGGGACAATTTCCTGC
AAACTACGTCCAGCTGAACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006213CBS51388_006213Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006213-T1.exon1CBS51388_006213-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006213-T1.exon2CBS51388_006213-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006213-T1.exon3CBS51388_006213-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006213-T1.cdsCBS51388_006213-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006213-T1CBS51388_006213-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262PPU
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR027267
DBxrefInterPro:IPR004148
DBxrefInterPro:IPR001452
DBxrefPFAM:PF14604
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
DBxrefPFAM:PF03114
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:961792..963131 +
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