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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:985894..987939- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006222-T1 ID=CBS51388_006222-T1|Name=CBS51388_006222-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2046bp|location=Sequence derived from alignment at An09:985894..987939- (Aspergillus niger CBS 513.88)
ATGGTCACTTCTGGAATGGTCAGAAATTTGGATAGCATCCCTTATGATGT
ATTCTACCAAGTGGCTTCTACCCTCGACTGTCAAGACCTCATTCATCTTA
GCCGCGTTAACCGAACATTAAATCAGTTGGTGCAAAATGAGTCAATTGCG
CGCAAGACAATCCAAGTAAGTAGCACCTCTTTGTTTGTGAATTGCGTCTT
ATACTGACTGTTTTAGAATGATCTACTGCACACGAAGGAAGGACAACAGG
CACACCAGGCCAAGACTGGATATCGCAGGGCTCTCGGGCGCCTGTTCGAC
ATCAAGGAATCATTCGCAACAGCACAGCCGTATTCTGCTTCCATTCTGGC
TTATGCGAGCTCCTTCATCTACAGTGAGGGCTGTCTCAGCTACATCTACA
ACGATGAAATCCGCGTTCTAGACGTGCACGGTGCCAGCCAAGTTGAGCAG
GTGCTGAACATCCACAACGTCCTATCCCGGGCTATCCAAGGGTGCAATCC
ACAGACAGATACGTTCCAGGTCTGCCTCATGTACTACAGTAACTGGGTTC
TGGCATTTACAGTGGAGTTTGTAGACAGACCCGAAGCCTGGCTTCTGGTA
GTGGACATGCGACGCAAAGTGACCAACAAGAAATGTGGACGACTCCGTCT
CCTGACTCGGCTTCAACACACACGACGATTATTCGTTCGACACAATGGCT
CCTATCTGTACTACGGAACGCACACCGCCATGGGGGATCGTGGCTACTCA
CAATGGGCAATCCATTGTGTGGATCTCAAAACAAGCCAGCACATGACTGA
AAAGCCAACCGTGCTGGAAAACTTCGCCGGCAGCGAGATTGGGCAGACCG
TATGTTTTGAAGTTCATCAGGACCACCTCTACGCAGTGTCAACGCTCGTT
GACTTTGAAGCGGAGGAGGTCGATTGGACCTCGTACTACGTGTGGCTCTG
CCTTCCCCCCAAGTCCAACGCCGCCAAACGATTCATCACGCCCAACCGTA
CTTGGCGTCGTCAGCATCGTGAAGGCCCGATCAATGACACCTGGTCGGAT
CTCACGCTGCGCCAGGATGAGGCAACCAAGCGACTGATGATCCTCGAATG
CCGCCGGGAATGGCGCGATGGTAGGAGCGAAAATGCACGCACATATTACA
TGCAGCCTTTACCGTCCCCAGCCGAAGCCACTCAGAATAAGCAGCAAGGC
TTGCATTCCACGCCCAACGCAACGCCTGTCACCCTCCCTGACGAGCCTCT
CACCAGAACCCTCGACTCCACCAGCAAACCCAATTACGAACCCCCGCGTA
AGCGTCTACGCCGGCATTTCCACCAGGAATACGCACACGGCGGGGAACCG
GCCCACCGACAAGACTACATTCTTGCCAAAACCAAATTCCGCAGCTACAA
CCTCTCCGCTTCGACGTTTATCGATCTGGTCAACGACCCCTCTCCGGACA
CCCCCGGCAGCTTCATCCCCCATGACCGACTCCGTGTGCGCATGGTATCA
CGCAAACGCAAATGTCCCATTGACGAGAACGGGGACGAAGGCGAACCGGG
CCTGCTCTTCCGCCCCGAACTCAGCGATGCAGATGGCCAGCCGATTGAGC
ACAGCGAAGAACGCTACGCCTCACGCGGGGTCCGTCTGTGGCCCCCCGAC
AACGCCCCGCGGGAATTGACTCAGCTCCTCTGCCCATCGAAGCGCTGTGG
CCCCGTTCGGGCAGCCGCCGACGAACGGTCCCTCGTGTACTCGGTTGATC
AGGAAGGCCTGGAAGGGACCGGACATCAGGCGATTGTGCTGATCAATTTC
GACCCGTCGCTACGCCTGCCCGGCTTACAGAGCATGAATCTCACCCGTGG
TGGAGCAGGCGCCCTGCCAGCGGACGAGTGTGATGCCCCAGTAGGCATGG
AGCGACCAGCCATCGGAGATATCGGACGCGAACGGGTGGGCGTGCACACA
TTAATCGGCAGTCGAAGGGCGAACCAGCCGGTGCCATCTGTCCGTGAGGA
ACAGGCCCTGTATCTTTCTATTCGACGGGGGTATTGGCTTCGGTAA back to topCoding sequence (CDS) from alignment at An09:985894..987939- >CBS51388_006222-T1 ID=CBS51388_006222-T1|Name=CBS51388_006222-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3990bp|location=Sequence derived from alignment at An09:985894..987939- (Aspergillus niger CBS 513.88)
AATGATCTACTGCACACGAAGGAAGGACAACAGGCACACCAGGCCAAGAC
TGGATATCGCAGGGCTCTCGGGCGCCTGTTCGACATCAAGGAATCATTCG
CAACAGCACAGCCGTATTCTGCTTCCATTCTGGCTTATGCGAGCTCCTTC
ATCTACAGTGAGGGCTGTCTCAGCTACATCTACAACGATGAAATCCGCGT
TCTAGACGTGCACGGTGCCAGCCAAGTTGAGCAGGTGCTGAACATCCACA
ACGTCCTATCCCGGGCTATCCAAGGGTGCAATCCACAGACAGATACGTTC
CAGGTCTGCCTCATGTACTACAGTAACTGGGTTCTGGCATTTACAGTGGA
GTTTGTAGACAGACCCGAAGCCTGGCTTCTGGTAGTGGACATGCGACGCA
AAGTGACCAACAAGAAATGTGGACGACTCCGTCTCCTGACTCGGCTTCAA
CACACACGACGATTATTCGTTCGACACAATGGCTCCTATCTGTACTACGG
AACGCACACCGCCATGGGGGATCGTGGCTACTCACAATGGGCAATCCATT
GTGTGGATCTCAAAACAAGCCAGCACATGACTGAAAAGCCAACCGTGCTG
GAAAACTTCGCCGGCAGCGAGATTGGGCAGACCGTATGTTTTGAAGTTCA
TCAGGACCACCTCTACGCAGTGTCAACGCTCGTTGACTTTGAAGCGGAGG
AGGTCGATTGGACCTCGTACTACGTGTGGCTCTGCCTTCCCCCCAAGTCC
AACGCCGCCAAACGATTCATCACGCCCAACCGTACTTGGCGTCGTCAGCA
TCGTGAAGGCCCGATCAATGACACCTGGTCGGATCTCACGCTGCGCCAGG
ATGAGGCAACCAAGCGACTGATGATCCTCGAATGCCGCCGGGAATGGCGC
GATGGTAGGAGCGAAAATGCACGCACATATTACATGCAGCCTTTACCGTC
CCCAGCCGAAGCCACTCAGAATAAGCAGCAAGGCTTGCATTCCACGCCCA
ACGCAACGCCTGTCACCCTCCCTGACGAGCCTCTCACCAGAACCCTCGAC
TCCACCAGCAAACCCAATTACGAACCCCCGCGTAAGCGTCTACGCCGGCA
TTTCCACCAGGAATACGCACACGGCGGGGAACCGGCCCACCGACAAGACT
ACATTCTTGCCAAAACCAAATTCCGCAGCTACAACCTCTCCGCTTCGACG
TTTATCGATCTGGTCAACGACCCCTCTCCGGACACCCCCGGCAGCTTCAT
CCCCCATGACCGACTCCGTGTGCGCATGGTATCACGCAAACGCAAATGTC
CCATTGACGAGAACGGGGACGAAGGCGAACCGGGCCTGCTCTTCCGCCCC
GAACTCAGCGATGCAGATGGCCAGCCGATTGAGCACAGCGAAGAACGCTA
CGCCTCACGCGGGGTCCGTCTGTGGCCCCCCGACAACGCCCCGCGGGAAT
TGACTCAGCTCCTCTGCCCATCGAAGCGCTGTGGCCCCGTTCGGGCAGCC
GCCGACGAACGGTCCCTCGTGTACTCGGTTGATCAGGAAGGCCTGGAAGG
GACCGGACATCAGGCGATTGTGCTGATCAATTTCGACCCGTCGCTACGCC
TGCCCGGCTTACAGAGCATGAATCTCACCCGTGGTGGAGCAGGCGCCCTG
CCAGCGGACGAGTGTGATGCCCCAGTAGGCATGGAGCGACCAGCCATCGG
AGATATCGGACGCGAACGGGTGGGCGTGCACACATTAATCGGCAGTCGAA
GGGCGAACCAGCCGGTGCCATCTGTCCGTGAGGAACAGGCCCTGTATCTT
TCTATTCGACGGGGGTATTGGCTTCGGTAAATGGTCACTTCTGGAATGGT
CAGAAATTTGGATAGCATCCCTTATGATGTATTCTACCAAGTGGCTTCTA
CCCTCGACTGTCAAGACCTCATTCATCTTAGCCGCGTTAACCGAACATTA
AATCAGTTGGTGCAAAATGAGTCAATTGCGCGCAAGACAATCCAAAATGA
TCTACTGCACACGAAGGAAGGACAACAGGCACACCAGGCCAAGACTGGAT
ATCGCAGGGCTCTCGGGCGCCTGTTCGACATCAAGGAATCATTCGCAACA
GCACAGCCGTATTCTGCTTCCATTCTGGCTTATGCGAGCTCCTTCATCTA
CAGTGAGGGCTGTCTCAGCTACATCTACAACGATGAAATCCGCGTTCTAG
ACGTGCACGGTGCCAGCCAAGTTGAGCAGGTGCTGAACATCCACAACGTC
CTATCCCGGGCTATCCAAGGGTGCAATCCACAGACAGATACGTTCCAGGT
CTGCCTCATGTACTACAGTAACTGGGTTCTGGCATTTACAGTGGAGTTTG
TAGACAGACCCGAAGCCTGGCTTCTGGTAGTGGACATGCGACGCAAAGTG
ACCAACAAGAAATGTGGACGACTCCGTCTCCTGACTCGGCTTCAACACAC
ACGACGATTATTCGTTCGACACAATGGCTCCTATCTGTACTACGGAACGC
ACACCGCCATGGGGGATCGTGGCTACTCACAATGGGCAATCCATTGTGTG
GATCTCAAAACAAGCCAGCACATGACTGAAAAGCCAACCGTGCTGGAAAA
CTTCGCCGGCAGCGAGATTGGGCAGACCGTATGTTTTGAAGTTCATCAGG
ACCACCTCTACGCAGTGTCAACGCTCGTTGACTTTGAAGCGGAGGAGGTC
GATTGGACCTCGTACTACGTGTGGCTCTGCCTTCCCCCCAAGTCCAACGC
CGCCAAACGATTCATCACGCCCAACCGTACTTGGCGTCGTCAGCATCGTG
AAGGCCCGATCAATGACACCTGGTCGGATCTCACGCTGCGCCAGGATGAG
GCAACCAAGCGACTGATGATCCTCGAATGCCGCCGGGAATGGCGCGATGG
TAGGAGCGAAAATGCACGCACATATTACATGCAGCCTTTACCGTCCCCAG
CCGAAGCCACTCAGAATAAGCAGCAAGGCTTGCATTCCACGCCCAACGCA
ACGCCTGTCACCCTCCCTGACGAGCCTCTCACCAGAACCCTCGACTCCAC
CAGCAAACCCAATTACGAACCCCCGCGTAAGCGTCTACGCCGGCATTTCC
ACCAGGAATACGCACACGGCGGGGAACCGGCCCACCGACAAGACTACATT
CTTGCCAAAACCAAATTCCGCAGCTACAACCTCTCCGCTTCGACGTTTAT
CGATCTGGTCAACGACCCCTCTCCGGACACCCCCGGCAGCTTCATCCCCC
ATGACCGACTCCGTGTGCGCATGGTATCACGCAAACGCAAATGTCCCATT
GACGAGAACGGGGACGAAGGCGAACCGGGCCTGCTCTTCCGCCCCGAACT
CAGCGATGCAGATGGCCAGCCGATTGAGCACAGCGAAGAACGCTACGCCT
CACGCGGGGTCCGTCTGTGGCCCCCCGACAACGCCCCGCGGGAATTGACT
CAGCTCCTCTGCCCATCGAAGCGCTGTGGCCCCGTTCGGGCAGCCGCCGA
CGAACGGTCCCTCGTGTACTCGGTTGATCAGGAAGGCCTGGAAGGGACCG
GACATCAGGCGATTGTGCTGATCAATTTCGACCCGTCGCTACGCCTGCCC
GGCTTACAGAGCATGAATCTCACCCGTGGTGGAGCAGGCGCCCTGCCAGC
GGACGAGTGTGATGCCCCAGTAGGCATGGAGCGACCAGCCATCGGAGATA
TCGGACGCGAACGGGTGGGCGTGCACACATTAATCGGCAGTCGAAGGGCG
AACCAGCCGGTGCCATCTGTCCGTGAGGAACAGGCCCTGTATCTTTCTAT
TCGACGGGGGTATTGGCTTCGGTAAATGGTCACTTCTGGAATGGTCAGAA
ATTTGGATAGCATCCCTTATGATGTATTCTACCAAGTGGCTTCTACCCTC
GACTGTCAAGACCTCATTCATCTTAGCCGCGTTAACCGAACATTAAATCA
GTTGGTGCAAAATGAGTCAATTGCGCGCAAGACAATCCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:985894..987939 - |
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