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CBS51388_006253-T1, CBS51388_006253-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006253-T1
Unique NameCBS51388_006253-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1090124..1091018+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006253-T1 ID=CBS51388_006253-T1|Name=CBS51388_006253-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=895bp|location=Sequence derived from alignment at An09:1090124..1091018+ (Aspergillus niger CBS 513.88)
ATGGACCACACAGACCCCTTCCTCCAAGTCCAAGCGTAAGTTTCTCTCCC
CCTTATTCATCCACTCTACAACCCATCAAGCCAGCTAGCTGACGTAGCAC
CAATCCAATGCCAACAGCGACGTCCTCTCAACCCTCCAATCCACACGTCC
TCTATTCTCCTCCTATCTCCGCATCCGCTCCCTCGCCAAGTCTCCCAATA
ACCCGGAGCTCCAACAAGCGCGCTCCGAGCTTGAGACGACCCTCACCGAT
CTTACCGCGGACTTAGACGATCTAGTCGAGAGTGTGCGTGCAATCGAGCA
AGATCCATATCGATTCGGCCTAGAACTAGAAGAAGTTCAGCGCCGGCGAA
GTCTTGTTAACGATGTCGGTGCCGAGATCGAGAAGATGAGGGAGGAGTTG
CAGAGGACGGTTACAGCTTCGAGTGGTGGTGGGAAGGGCACGGGTGCGCT
GCCAAACCCGGCTGATTTCGATAATGTCTTATCGCCGTCGGCGGAGGATC
AGGGAGATGATTACTATGCTGCGATGGAGCAGCAGCGGCAGATGGAGCTG
ATGCACGAGCAAGATGAGCAGTTGGATGGGGTGTTTCGGACTGTGGGGAA
CCTGCGACAGCAGGCTGATGATATGGGGAGGGAGTTGGAGGAACAGGGGG
TGATGATAGATGAGGTGGATACGTTGGCCGACCGAGTGGGCGGCAAGCTG
CAGAATGGCATGTCGAGGCTAAAATACATTATACGGAAAAATGAGGGTAA
GTGCTTCCGCTGCGACTTCTTTACATTGTCCTTTTTCGGAAGAAAAACGT
TGGCTGATTATCAATTAGATACAATGTCATCCTTTTGCATTGCCGTCCTC
ATATTCGTTTTGGTCCTCCTCCTCATCCTGCTCATTGTTCTTTAA
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Coding sequence (CDS) from alignment at An09:1090124..1091018+

>CBS51388_006253-T1 ID=CBS51388_006253-T1|Name=CBS51388_006253-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2223bp|location=Sequence derived from alignment at An09:1090124..1091018+ (Aspergillus niger CBS 513.88)
ATGGACCACACAGACCCCTTCCTCCAAGTCCAAGCCGACGTCCTCTCAAC
CCTCCAATCCACACGTCCTCTATTCTCCTCCTATCTCCGCATCCGCTCCC
TCGCCAAGTCTCCCAATAACCCGGAGCTCCAACAAGCGCGCTCCGAGCTT
GAGACGACCCTCACCGATCTTACCGCGGACTTAGACGATCTAGTCGAGAG
TGTGCGTGCAATCGAGCAAGATCCATATCGATTCGGCCTAGAACTAGAAG
AAGTTCAGCGCCGGCGAAGTCTTGTTAACGATGTCGGTGCCGAGATCGAG
AAGATGAGGGAGGAGTTGCAGAGGACGGTTACAGCTTCGAGTGGTGGTGG
GAAGGGCACGGGTGCGCTGCCAAACCCGGCTGATTTCGATAATGTCTTAT
CGCCGTCGGCGGAGGATCAGGGAGATGATTACTATGCTGCGATGGAGCAG
CAGCGGCAGATGGAGCTGATGCACGAGCAAGATGAGCAGTTGGATGGGGT
GTTTCGGACTGTGGGGAACCTGCGACAGCAGGCTGATGATATGGGGAGGG
AGTTGGAGGAACAGGGGGTGATGATAGATGAGGTGGATACGTTGGCCGAC
CGAGTGGGCGGCAAGCTGCAGAATGGCATGTCGAGGCTAAAATACATTAT
ACGGAAAAATGAGGATACAATGTCATCCTTTTGCATTGCCGTCCTCATAT
TCGTTTTGGTCCTCCTCCTCATCCTGCTCATTGTTCTTTAAATGGACCAC
ACAGACCCCTTCCTCCAAGTCCAAGCCGACGTCCTCTCAACCCTCCAATC
CACACGTCCTCTATTCTCCTCCTATCTCCGCATCCGCTCCCTCGCCAAGT
CTCCCAATAACCCGGAGCTCCAACAAGCGCGCTCCGAGCTTGAGACGACC
CTCACCGATCTTACCGCGGACTTAGACGATCTAGTCGAGAGTGTGCGTGC
AATCGAGCAAGATCCATATCGATTCGGCCTAGAACTAGAAGAAGTTCAGC
GCCGGCGAAGTCTTGTTAACGATGTCGGTGCCGAGATCGAGAAGATGAGG
GAGGAGTTGCAGAGGACGGTTACAGCTTCGAGTGGTGGTGGGAAGGGCAC
GGGTGCGCTGCCAAACCCGGCTGATTTCGATAATGTCTTATCGCCGTCGG
CGGAGGATCAGGGAGATGATTACTATGCTGCGATGGAGCAGCAGCGGCAG
ATGGAGCTGATGCACGAGCAAGATGAGCAGTTGGATGGGGTGTTTCGGAC
TGTGGGGAACCTGCGACAGCAGGCTGATGATATGGGGAGGGAGTTGGAGG
AACAGGGGGTGATGATAGATGAGGTGGATACGTTGGCCGACCGAGTGGGC
GGCAAGCTGCAGAATGGCATGTCGAGGCTAAAATACATTATACGGAAAAA
TGAGGATACAATGTCATCCTTTTGCATTGCCGTCCTCATATTCGTTTTGG
TCCTCCTCCTCATCCTGCTCATTGTTCTTTAAATGGACCACACAGACCCC
TTCCTCCAAGTCCAAGCCGACGTCCTCTCAACCCTCCAATCCACACGTCC
TCTATTCTCCTCCTATCTCCGCATCCGCTCCCTCGCCAAGTCTCCCAATA
ACCCGGAGCTCCAACAAGCGCGCTCCGAGCTTGAGACGACCCTCACCGAT
CTTACCGCGGACTTAGACGATCTAGTCGAGAGTGTGCGTGCAATCGAGCA
AGATCCATATCGATTCGGCCTAGAACTAGAAGAAGTTCAGCGCCGGCGAA
GTCTTGTTAACGATGTCGGTGCCGAGATCGAGAAGATGAGGGAGGAGTTG
CAGAGGACGGTTACAGCTTCGAGTGGTGGTGGGAAGGGCACGGGTGCGCT
GCCAAACCCGGCTGATTTCGATAATGTCTTATCGCCGTCGGCGGAGGATC
AGGGAGATGATTACTATGCTGCGATGGAGCAGCAGCGGCAGATGGAGCTG
ATGCACGAGCAAGATGAGCAGTTGGATGGGGTGTTTCGGACTGTGGGGAA
CCTGCGACAGCAGGCTGATGATATGGGGAGGGAGTTGGAGGAACAGGGGG
TGATGATAGATGAGGTGGATACGTTGGCCGACCGAGTGGGCGGCAAGCTG
CAGAATGGCATGTCGAGGCTAAAATACATTATACGGAAAAATGAGGATAC
AATGTCATCCTTTTGCATTGCCGTCCTCATATTCGTTTTGGTCCTCCTCC
TCATCCTGCTCATTGTTCTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0048193Golgi vesicle transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006253CBS51388_006253Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006253-T1.exon1CBS51388_006253-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006253-T1.exon2CBS51388_006253-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006253-T1.exon3CBS51388_006253-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006253-T1.cdsCBS51388_006253-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006253-T1CBS51388_006253-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265B1X
DBxrefInterPro:IPR010989
DBxrefInterPro:IPR015260
DBxrefInterPro:IPR000727
DBxrefPFAM:PF09177
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1090124..1091018 +
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