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CBS51388_006256-T1, CBS51388_006256-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006256-T1
Unique NameCBS51388_006256-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1101315..1103145-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006256-T1 ID=CBS51388_006256-T1|Name=CBS51388_006256-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1831bp|location=Sequence derived from alignment at An09:1101315..1103145- (Aspergillus niger CBS 513.88)
ATGGCAGCTCTCGATGTCAATGGTCCCTTGCCCGAGCTGTCTGAGCAGCA
GCCGGACGATCTCATCCCCGAGTCCCGGGTCCTCATTATCATGACTGGTG
GTACAATCTGTATGCGACAGTCCCCGTCAGGCTTCATTCCTGCCAGAGGT
TTCCAGGAGCAATGTCTGGCCCGGGTGCCGACATTCAACGATGGTTCGCA
CCCGAGCATGATGGATGTTGTGATCAACTCAGACGGAGAGATCAAAGGAC
ATCCCGCTCTCCGCACACCACAGACAGCCTATGGGCGACGGGTGCGGTAC
ACTGTCTTCGAGTTCGAAGAGCTCCTCGATAGCAGTTCTATCGATGCGAA
AGGTTGGGCCCAGATCGCCCACACCGTTGAACGAAACTACACACTTTTCG
ATGGCTTCGTCGTCCTCCACGGAACAGACAGTCTCGCATACACATGCTCA
GCGCTTAGCTTCATGCTGCAGAATCTCGGAAAGCCCGTGATTCTCACTGG
AGCACAGGCGCCCATGCTGGAATTGCAGAATGATGCCACCGATAACCTTC
TCGGATCACTGGTCGTGGCTAGCCATTTCATGATTCCCGAAGTGTGCCTG
TACTTCAACAACCGACTGTTCCGTGGCAACCGGTCGATCAAGGTCGCGGC
CAGTGATTTCGCTGCCTTCGACTCTCCGAATTGCCCCCCGCTGGCGGTGA
CAACCTCCATGCGGACCAACGTGAACTGGGAGCTGGTCAACCGACCGAAG
AGCCTCGAACATTTCCGTATCCAGACCAACCTCGACACCACCCACGTGGC
GTGTCTTCGTATCTTCCCTGGTATCAAGCCGGAGATGGTCGACGCCGTGC
TGAAGCTGGAAGGACTTCGTGGTTTAGTGTTGGAGACGTTTGGCGCCGGT
AACGCACCGAGTGGTCAAGACAATGCCATGACCAATGTGTTGGCCGCCGC
TATCAAGAGAGGAATCGTGATCGTGAATGTCACGCAATGTGAGTAATGAA
ACCCTTGCCAAGAATCCCTCAAACCAGAATTCAATCTGACGCAACCAACC
AACCAGGTCTGACGGGAAGTGTCAGCCCAGTCTATGCCCCAGGCATGAGT
CTCTCTCGCGCCGGAGTCGTCGCAGGACTCGACCTGACCACCGAAGCTGC
ACTGACCAAGATGTCGTATCTTCTCGCTCTTCCCGATTCCACCCCAGAAT
GGGTAGCCAAGAAAATGTCAGTATCTCTTCGCGGCGAATTGACCGAGGTA
TCGCAGCCAGTCTTCCGCCACCCGGACGGGGCGCTCCCAGAGCGCGTTCA
GTCCCTCACGGTGCTCGGGTACGCCATCGCGCAGGGTGATCTCGAGCGCG
TGGAGGAGATTGTGGCCCGAGAACACCAATGGTTATTGAATGACGCCGAT
TATTCGGGCAACACACCTATCGTAAGGCAACCCCTTGAGCTGTATTTGAG
AAAAAAGAAAAAAAGCAAACTGACACCCACGTCACCTCACAGCACCTCGC
AGCGACATCTCCCTCAATTGAGATTCTCCGATACCTGTTGCTCCAGGGTG
GCTCCGTGCACTTGCGAAACCGCAATGGTCGGACGCCGCTGTTCCTGGCG
GCCAACGCAGGATTCTCGGAGCACGTGCTGCTGCTACGCAAGTCTGGAGC
GCATCTGCACTCTGACGAACGCACGGCGGCGCAGTTGTTGGCCCGGCGCC
GACCTGGCGTCTGGGGGTTGGCGGGGATTGGGCCGCGCGAGGTGAGTGAG
CGCGAGATGGAGGAACTGGAGGACTCGAGTGTGTCTATAGGACGTATGGC
GCAGCGAGTGATGGCGGGATCGGCACCTTGA
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Coding sequence (CDS) from alignment at An09:1101315..1103145-

>CBS51388_006256-T1 ID=CBS51388_006256-T1|Name=CBS51388_006256-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5076bp|location=Sequence derived from alignment at An09:1101315..1103145- (Aspergillus niger CBS 513.88)
CACCTCGCAGCGACATCTCCCTCAATTGAGATTCTCCGATACCTGTTGCT
CCAGGGTGGCTCCGTGCACTTGCGAAACCGCAATGGTCGGACGCCGCTGT
TCCTGGCGGCCAACGCAGGATTCTCGGAGCACGTGCTGCTGCTACGCAAG
TCTGGAGCGCATCTGCACTCTGACGAACGCACGGCGGCGCAGTTGTTGGC
CCGGCGCCGACCTGGCGTCTGGGGGTTGGCGGGGATTGGGCCGCGCGAGG
TGAGTGAGCGCGAGATGGAGGAACTGGAGGACTCGAGTGTGTCTATAGGA
CGTATGGCGCAGCGAGTGATGGCGGGATCGGCACCTTGAGTCTGACGGGA
AGTGTCAGCCCAGTCTATGCCCCAGGCATGAGTCTCTCTCGCGCCGGAGT
CGTCGCAGGACTCGACCTGACCACCGAAGCTGCACTGACCAAGATGTCGT
ATCTTCTCGCTCTTCCCGATTCCACCCCAGAATGGGTAGCCAAGAAAATG
TCAGTATCTCTTCGCGGCGAATTGACCGAGGTATCGCAGCCAGTCTTCCG
CCACCCGGACGGGGCGCTCCCAGAGCGCGTTCAGTCCCTCACGGTGCTCG
GGTACGCCATCGCGCAGGGTGATCTCGAGCGCGTGGAGGAGATTGTGGCC
CGAGAACACCAATGGTTATTGAATGACGCCGATTATTCGGGCAACACACC
TATCATGGCAGCTCTCGATGTCAATGGTCCCTTGCCCGAGCTGTCTGAGC
AGCAGCCGGACGATCTCATCCCCGAGTCCCGGGTCCTCATTATCATGACT
GGTGGTACAATCTGTATGCGACAGTCCCCGTCAGGCTTCATTCCTGCCAG
AGGTTTCCAGGAGCAATGTCTGGCCCGGGTGCCGACATTCAACGATGGTT
CGCACCCGAGCATGATGGATGTTGTGATCAACTCAGACGGAGAGATCAAA
GGACATCCCGCTCTCCGCACACCACAGACAGCCTATGGGCGACGGGTGCG
GTACACTGTCTTCGAGTTCGAAGAGCTCCTCGATAGCAGTTCTATCGATG
CGAAAGGTTGGGCCCAGATCGCCCACACCGTTGAACGAAACTACACACTT
TTCGATGGCTTCGTCGTCCTCCACGGAACAGACAGTCTCGCATACACATG
CTCAGCGCTTAGCTTCATGCTGCAGAATCTCGGAAAGCCCGTGATTCTCA
CTGGAGCACAGGCGCCCATGCTGGAATTGCAGAATGATGCCACCGATAAC
CTTCTCGGATCACTGGTCGTGGCTAGCCATTTCATGATTCCCGAAGTGTG
CCTGTACTTCAACAACCGACTGTTCCGTGGCAACCGGTCGATCAAGGTCG
CGGCCAGTGATTTCGCTGCCTTCGACTCTCCGAATTGCCCCCCGCTGGCG
GTGACAACCTCCATGCGGACCAACGTGAACTGGGAGCTGGTCAACCGACC
GAAGAGCCTCGAACATTTCCGTATCCAGACCAACCTCGACACCACCCACG
TGGCGTGTCTTCGTATCTTCCCTGGTATCAAGCCGGAGATGGTCGACGCC
GTGCTGAAGCTGGAAGGACTTCGTGGTTTAGTGTTGGAGACGTTTGGCGC
CGGTAACGCACCGAGTGGTCAAGACAATGCCATGACCAATGTGTTGGCCG
CCGCTATCAAGAGAGGAATCGTGATCGTGAATGTCACGCAATCACCTCGC
AGCGACATCTCCCTCAATTGAGATTCTCCGATACCTGTTGCTCCAGGGTG
GCTCCGTGCACTTGCGAAACCGCAATGGTCGGACGCCGCTGTTCCTGGCG
GCCAACGCAGGATTCTCGGAGCACGTGCTGCTGCTACGCAAGTCTGGAGC
GCATCTGCACTCTGACGAACGCACGGCGGCGCAGTTGTTGGCCCGGCGCC
GACCTGGCGTCTGGGGGTTGGCGGGGATTGGGCCGCGCGAGGTGAGTGAG
CGCGAGATGGAGGAACTGGAGGACTCGAGTGTGTCTATAGGACGTATGGC
GCAGCGAGTGATGGCGGGATCGGCACCTTGAGTCTGACGGGAAGTGTCAG
CCCAGTCTATGCCCCAGGCATGAGTCTCTCTCGCGCCGGAGTCGTCGCAG
GACTCGACCTGACCACCGAAGCTGCACTGACCAAGATGTCGTATCTTCTC
GCTCTTCCCGATTCCACCCCAGAATGGGTAGCCAAGAAAATGTCAGTATC
TCTTCGCGGCGAATTGACCGAGGTATCGCAGCCAGTCTTCCGCCACCCGG
ACGGGGCGCTCCCAGAGCGCGTTCAGTCCCTCACGGTGCTCGGGTACGCC
ATCGCGCAGGGTGATCTCGAGCGCGTGGAGGAGATTGTGGCCCGAGAACA
CCAATGGTTATTGAATGACGCCGATTATTCGGGCAACACACCTATCATGG
CAGCTCTCGATGTCAATGGTCCCTTGCCCGAGCTGTCTGAGCAGCAGCCG
GACGATCTCATCCCCGAGTCCCGGGTCCTCATTATCATGACTGGTGGTAC
AATCTGTATGCGACAGTCCCCGTCAGGCTTCATTCCTGCCAGAGGTTTCC
AGGAGCAATGTCTGGCCCGGGTGCCGACATTCAACGATGGTTCGCACCCG
AGCATGATGGATGTTGTGATCAACTCAGACGGAGAGATCAAAGGACATCC
CGCTCTCCGCACACCACAGACAGCCTATGGGCGACGGGTGCGGTACACTG
TCTTCGAGTTCGAAGAGCTCCTCGATAGCAGTTCTATCGATGCGAAAGGT
TGGGCCCAGATCGCCCACACCGTTGAACGAAACTACACACTTTTCGATGG
CTTCGTCGTCCTCCACGGAACAGACAGTCTCGCATACACATGCTCAGCGC
TTAGCTTCATGCTGCAGAATCTCGGAAAGCCCGTGATTCTCACTGGAGCA
CAGGCGCCCATGCTGGAATTGCAGAATGATGCCACCGATAACCTTCTCGG
ATCACTGGTCGTGGCTAGCCATTTCATGATTCCCGAAGTGTGCCTGTACT
TCAACAACCGACTGTTCCGTGGCAACCGGTCGATCAAGGTCGCGGCCAGT
GATTTCGCTGCCTTCGACTCTCCGAATTGCCCCCCGCTGGCGGTGACAAC
CTCCATGCGGACCAACGTGAACTGGGAGCTGGTCAACCGACCGAAGAGCC
TCGAACATTTCCGTATCCAGACCAACCTCGACACCACCCACGTGGCGTGT
CTTCGTATCTTCCCTGGTATCAAGCCGGAGATGGTCGACGCCGTGCTGAA
GCTGGAAGGACTTCGTGGTTTAGTGTTGGAGACGTTTGGCGCCGGTAACG
CACCGAGTGGTCAAGACAATGCCATGACCAATGTGTTGGCCGCCGCTATC
AAGAGAGGAATCGTGATCGTGAATGTCACGCAATCACCTCGCAGCGACAT
CTCCCTCAATTGAGATTCTCCGATACCTGTTGCTCCAGGGTGGCTCCGTG
CACTTGCGAAACCGCAATGGTCGGACGCCGCTGTTCCTGGCGGCCAACGC
AGGATTCTCGGAGCACGTGCTGCTGCTACGCAAGTCTGGAGCGCATCTGC
ACTCTGACGAACGCACGGCGGCGCAGTTGTTGGCCCGGCGCCGACCTGGC
GTCTGGGGGTTGGCGGGGATTGGGCCGCGCGAGGTGAGTGAGCGCGAGAT
GGAGGAACTGGAGGACTCGAGTGTGTCTATAGGACGTATGGCGCAGCGAG
TGATGGCGGGATCGGCACCTTGAGTCTGACGGGAAGTGTCAGCCCAGTCT
ATGCCCCAGGCATGAGTCTCTCTCGCGCCGGAGTCGTCGCAGGACTCGAC
CTGACCACCGAAGCTGCACTGACCAAGATGTCGTATCTTCTCGCTCTTCC
CGATTCCACCCCAGAATGGGTAGCCAAGAAAATGTCAGTATCTCTTCGCG
GCGAATTGACCGAGGTATCGCAGCCAGTCTTCCGCCACCCGGACGGGGCG
CTCCCAGAGCGCGTTCAGTCCCTCACGGTGCTCGGGTACGCCATCGCGCA
GGGTGATCTCGAGCGCGTGGAGGAGATTGTGGCCCGAGAACACCAATGGT
TATTGAATGACGCCGATTATTCGGGCAACACACCTATCATGGCAGCTCTC
GATGTCAATGGTCCCTTGCCCGAGCTGTCTGAGCAGCAGCCGGACGATCT
CATCCCCGAGTCCCGGGTCCTCATTATCATGACTGGTGGTACAATCTGTA
TGCGACAGTCCCCGTCAGGCTTCATTCCTGCCAGAGGTTTCCAGGAGCAA
TGTCTGGCCCGGGTGCCGACATTCAACGATGGTTCGCACCCGAGCATGAT
GGATGTTGTGATCAACTCAGACGGAGAGATCAAAGGACATCCCGCTCTCC
GCACACCACAGACAGCCTATGGGCGACGGGTGCGGTACACTGTCTTCGAG
TTCGAAGAGCTCCTCGATAGCAGTTCTATCGATGCGAAAGGTTGGGCCCA
GATCGCCCACACCGTTGAACGAAACTACACACTTTTCGATGGCTTCGTCG
TCCTCCACGGAACAGACAGTCTCGCATACACATGCTCAGCGCTTAGCTTC
ATGCTGCAGAATCTCGGAAAGCCCGTGATTCTCACTGGAGCACAGGCGCC
CATGCTGGAATTGCAGAATGATGCCACCGATAACCTTCTCGGATCACTGG
TCGTGGCTAGCCATTTCATGATTCCCGAAGTGTGCCTGTACTTCAACAAC
CGACTGTTCCGTGGCAACCGGTCGATCAAGGTCGCGGCCAGTGATTTCGC
TGCCTTCGACTCTCCGAATTGCCCCCCGCTGGCGGTGACAACCTCCATGC
GGACCAACGTGAACTGGGAGCTGGTCAACCGACCGAAGAGCCTCGAACAT
TTCCGTATCCAGACCAACCTCGACACCACCCACGTGGCGTGTCTTCGTAT
CTTCCCTGGTATCAAGCCGGAGATGGTCGACGCCGTGCTGAAGCTGGAAG
GACTTCGTGGTTTAGTGTTGGAGACGTTTGGCGCCGGTAACGCACCGAGT
GGTCAAGACAATGCCATGACCAATGTGTTGGCCGCCGCTATCAAGAGAGG
AATCGTGATCGTGAATGTCACGCAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006256CBS51388_006256Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006256-T1CBS51388_006256-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006256-T1.cdsCBS51388_006256-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006256-T1.exon3CBS51388_006256-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006256-T1.exon2CBS51388_006256-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006256-T1.exon1CBS51388_006256-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036152
DBxrefInterPro:IPR041725
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR027474
DBxrefInterPro:IPR027473
DBxrefInterPro:IPR037152
DBxrefInterPro:IPR040919
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefInterPro:IPR006034
DBxrefPFAM:PF17763
DBxrefPFAM:PF00710
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1101315..1103145 -
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