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CBS51388_006258-T1, CBS51388_006258-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006258-T1
Unique NameCBS51388_006258-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1107180..1108925-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006258-T1 ID=CBS51388_006258-T1|Name=CBS51388_006258-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1746bp|location=Sequence derived from alignment at An09:1107180..1108925- (Aspergillus niger CBS 513.88)
ATGGAATCCGAGAAGAAGCGCCGTGCGAGCAAACCTAAAGTCAAAACAGG
CTGTCGGACATGCAAGTGAGTTGGGCGGCTGCCTTGTTACACAAGTTGGT
GTGGTGCTTATTCTATACACAGGATTCGTCGAGTCAAATGCGACGAGGGT
CGACCGGCTTGCAAGAGATGCGTATCAACTGGCCGAGTCTGCGATGGCTA
TGGGGTTTGGAGTGAAGCGAAAAAGCCCACCGTCGACGGCAATACTGGCG
CACCAAGAGCCTTCCAGAGTCTGCTGTCTAGTTACAATGCACCGGTCCCA
ATTCCTCATGCCGCATGTGCTGAGCGGAAATATGTGGAATGGTTCATCCA
GTGTACCATTTTCAAAATTGGAGGAGTGTTTTCTTCCCAATTCTGGGGCA
GAACCGTTGTTCAAGCACTTTCTCAAGAGCTAGCAGTACGGCATGCTGTT
TTGGCATTGGCCTCTACGCATAAATATAGGACTCAGAGGAGCGTTAGAGG
TACTGCAACGGCAGGTCATCTAAGCGAGCATGAGAAATTCACTCTCCAGC
ACTACAACAAAGCGATTGGCTGTCTCCAAGCTGAAATGAGACGCAACAAT
AAACAAACGCAGAGTATGATAGTTGCCCTCATTACTTGCATGGTTTTCGT
GACTCTCGAAATGATGCGAGGCCAATACCGAACAAGTCATACTCATCTAC
AGCACGGGCTGAGGCTGGTGAAGGAGATTCAGAGGCTCGCCGGAGCCCCT
AAGACCGGAAGATTTCGGATAAGGACTTCGTCACAAACAAATGAGGATGA
TGTTATCGAGGTCTTTAGCAGACTGAAAGTGCACTATGCTCTACTTGGAC
ATGGGACGAAGTACTCGAACCTTGACTATGACGTTCAACCTCGTCACTTA
CCGTATGAATTTCCATCAATTGAACAAGCAAGGCAATATCTGGATGGTCT
GCTGGCAAGAGCACAGGATCTGGTGGAAATGGGGCGTCACGTCGAGACGG
ACATGTTTGTTGCGACTCAGGGCTACCAGCAGTTTCTCGAGTCTCAATGG
CACCTGGAAAAGGACTTGGAAGTATGGCTTGATGTTTATCGATCGTCACT
TGGTAAATTCTCAGCTCAAGATCTGATTCAGAATACTTTGGCTAGAGGGC
TACTCGGGATGTACCATGCTATGGCCTTGATCATGGTCACGACCTGCATC
CCATGGGACGACGAAACGGCATTTGACCTACAAACCGACAGGTTCATGTC
GATTATTCGTGAGGCAATCGGCATCTGTCAAGCCCTCAAAATCGCATATC
CAGATTTCCCCACGAGTGGATCTCTCAATTGCCCGTTGGGAATGGCTTTT
ACGATGGACATTGGCTTCATCCAGCCATTATATTATACCGCAATTAAGTG
CCGGATTCCACAGATCCGACGACACGCGATCGAATTGCTTCGATTGGCAC
CGCACCGTGAAGGCATATGGAATGGCATCCTTACTGCTAGGATTGCGGAG
GAGGTAGTTGCTTATGAAGAGTGGAATATCGATGCAAGCCTTACTATGGC
AAAAAGCTTAGATCTCTTCAGCTTGCCAGAGGCGGGTGATTCACTTACAG
TCCTGCCTTATCTGTGCCGAATTTCAGATGTTCATGTCGAATTGCCCGAT
GAAAACACAGGAGAGGCTACCGCGACTTTCTGGCAGCGCGAAGACGGTAG
AAGCTGGAAGGTTGATGAGAGAAAATTCCAGACGGAGGATCCATAA
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Coding sequence (CDS) from alignment at An09:1107180..1108925-

>CBS51388_006258-T1 ID=CBS51388_006258-T1|Name=CBS51388_006258-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3378bp|location=Sequence derived from alignment at An09:1107180..1108925- (Aspergillus niger CBS 513.88)
GATTCGTCGAGTCAAATGCGACGAGGGTCGACCGGCTTGCAAGAGATGCG
TATCAACTGGCCGAGTCTGCGATGGCTATGGGGTTTGGAGTGAAGCGAAA
AAGCCCACCGTCGACGGCAATACTGGCGCACCAAGAGCCTTCCAGAGTCT
GCTGTCTAGTTACAATGCACCGGTCCCAATTCCTCATGCCGCATGTGCTG
AGCGGAAATATGTGGAATGGTTCATCCAGTGTACCATTTTCAAAATTGGA
GGAGTGTTTTCTTCCCAATTCTGGGGCAGAACCGTTGTTCAAGCACTTTC
TCAAGAGCTAGCAGTACGGCATGCTGTTTTGGCATTGGCCTCTACGCATA
AATATAGGACTCAGAGGAGCGTTAGAGGTACTGCAACGGCAGGTCATCTA
AGCGAGCATGAGAAATTCACTCTCCAGCACTACAACAAAGCGATTGGCTG
TCTCCAAGCTGAAATGAGACGCAACAATAAACAAACGCAGAGTATGATAG
TTGCCCTCATTACTTGCATGGTTTTCGTGACTCTCGAAATGATGCGAGGC
CAATACCGAACAAGTCATACTCATCTACAGCACGGGCTGAGGCTGGTGAA
GGAGATTCAGAGGCTCGCCGGAGCCCCTAAGACCGGAAGATTTCGGATAA
GGACTTCGTCACAAACAAATGAGGATGATGTTATCGAGGTCTTTAGCAGA
CTGAAAGTGCACTATGCTCTACTTGGACATGGGACGAAGTACTCGAACCT
TGACTATGACGTTCAACCTCGTCACTTACCGTATGAATTTCCATCAATTG
AACAAGCAAGGCAATATCTGGATGGTCTGCTGGCAAGAGCACAGGATCTG
GTGGAAATGGGGCGTCACGTCGAGACGGACATGTTTGTTGCGACTCAGGG
CTACCAGCAGTTTCTCGAGTCTCAATGGCACCTGGAAAAGGACTTGGAAG
TATGGCTTGATGTTTATCGATCGTCACTTGGTAAATTCTCAGCTCAAGAT
CTGATTCAGAATACTTTGGCTAGAGGGCTACTCGGGATGTACCATGCTAT
GGCCTTGATCATGGTCACGACCTGCATCCCATGGGACGACGAAACGGCAT
TTGACCTACAAACCGACAGGTTCATGTCGATTATTCGTGAGGCAATCGGC
ATCTGTCAAGCCCTCAAAATCGCATATCCAGATTTCCCCACGAGTGGATC
TCTCAATTGCCCGTTGGGAATGGCTTTTACGATGGACATTGGCTTCATCC
AGCCATTATATTATACCGCAATTAAGTGCCGGATTCCACAGATCCGACGA
CACGCGATCGAATTGCTTCGATTGGCACCGCACCGTGAAGGCATATGGAA
TGGCATCCTTACTGCTAGGATTGCGGAGGAGGTAGTTGCTTATGAAGAGT
GGAATATCGATGCAAGCCTTACTATGGCAAAAAGCTTAGATCTCTTCAGC
TTGCCAGAGGCGGGTGATTCACTTACAGTCCTGCCTTATCTGTGCCGAAT
TTCAGATGTTCATGTCGAATTGCCCGATGAAAACACAGGAGAGGCTACCG
CGACTTTCTGGCAGCGCGAAGACGGTAGAAGCTGGAAGGTTGATGAGAGA
AAATTCCAGACGGAGGATCCATAAATGGAATCCGAGAAGAAGCGCCGTGC
GAGCAAACCTAAAGTCAAAACAGGCTGTCGGACATGCAAGATTCGTCGAG
TCAAATGCGACGAGGGTCGACCGGCTTGCAAGAGATGCGTATCAACTGGC
CGAGTCTGCGATGGCTATGGGGTTTGGAGTGAAGCGAAAAAGCCCACCGT
CGACGGCAATACTGGCGCACCAAGAGCCTTCCAGAGTCTGCTGTCTAGTT
ACAATGCACCGGTCCCAATTCCTCATGCCGCATGTGCTGAGCGGAAATAT
GTGGAATGGTTCATCCAGTGTACCATTTTCAAAATTGGAGGAGTGTTTTC
TTCCCAATTCTGGGGCAGAACCGTTGTTCAAGCACTTTCTCAAGAGCTAG
CAGTACGGCATGCTGTTTTGGCATTGGCCTCTACGCATAAATATAGGACT
CAGAGGAGCGTTAGAGGTACTGCAACGGCAGGTCATCTAAGCGAGCATGA
GAAATTCACTCTCCAGCACTACAACAAAGCGATTGGCTGTCTCCAAGCTG
AAATGAGACGCAACAATAAACAAACGCAGAGTATGATAGTTGCCCTCATT
ACTTGCATGGTTTTCGTGACTCTCGAAATGATGCGAGGCCAATACCGAAC
AAGTCATACTCATCTACAGCACGGGCTGAGGCTGGTGAAGGAGATTCAGA
GGCTCGCCGGAGCCCCTAAGACCGGAAGATTTCGGATAAGGACTTCGTCA
CAAACAAATGAGGATGATGTTATCGAGGTCTTTAGCAGACTGAAAGTGCA
CTATGCTCTACTTGGACATGGGACGAAGTACTCGAACCTTGACTATGACG
TTCAACCTCGTCACTTACCGTATGAATTTCCATCAATTGAACAAGCAAGG
CAATATCTGGATGGTCTGCTGGCAAGAGCACAGGATCTGGTGGAAATGGG
GCGTCACGTCGAGACGGACATGTTTGTTGCGACTCAGGGCTACCAGCAGT
TTCTCGAGTCTCAATGGCACCTGGAAAAGGACTTGGAAGTATGGCTTGAT
GTTTATCGATCGTCACTTGGTAAATTCTCAGCTCAAGATCTGATTCAGAA
TACTTTGGCTAGAGGGCTACTCGGGATGTACCATGCTATGGCCTTGATCA
TGGTCACGACCTGCATCCCATGGGACGACGAAACGGCATTTGACCTACAA
ACCGACAGGTTCATGTCGATTATTCGTGAGGCAATCGGCATCTGTCAAGC
CCTCAAAATCGCATATCCAGATTTCCCCACGAGTGGATCTCTCAATTGCC
CGTTGGGAATGGCTTTTACGATGGACATTGGCTTCATCCAGCCATTATAT
TATACCGCAATTAAGTGCCGGATTCCACAGATCCGACGACACGCGATCGA
ATTGCTTCGATTGGCACCGCACCGTGAAGGCATATGGAATGGCATCCTTA
CTGCTAGGATTGCGGAGGAGGTAGTTGCTTATGAAGAGTGGAATATCGAT
GCAAGCCTTACTATGGCAAAAAGCTTAGATCTCTTCAGCTTGCCAGAGGC
GGGTGATTCACTTACAGTCCTGCCTTATCTGTGCCGAATTTCAGATGTTC
ATGTCGAATTGCCCGATGAAAACACAGGAGAGGCTACCGCGACTTTCTGG
CAGCGCGAAGACGGTAGAAGCTGGAAGGTTGATGAGAGAAAATTCCAGAC
GGAGGATCCATAAATGGAATCCGAGAAGAAGCGCCGTGCGAGCAAACCTA
AAGTCAAAACAGGCTGTCGGACATGCAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006258CBS51388_006258Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006258-T1CBS51388_006258-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006258-T1.cdsCBS51388_006258-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006258-T1.exon2CBS51388_006258-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006258-T1.exon1CBS51388_006258-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1107180..1108925 -
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