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CBS51388_006278-T1, CBS51388_006278-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006278-T1
Unique NameCBS51388_006278-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1181518..1182792-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006278-T1 ID=CBS51388_006278-T1|Name=CBS51388_006278-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1275bp|location=Sequence derived from alignment at An09:1181518..1182792- (Aspergillus niger CBS 513.88)
ATGCCAGCAATAAAACAATTCCCCACCCAACTGGCCCACACCCTCAGAAC
CCACAATGGTAAGCTAACTCTACGCCTTAAGCTCTAGAAGCTCTAGATCC
CCTCTGACGTACCTCAGGCCCCGTGAACGCAGTGACCTTCTCCAGCTATC
CTGGAACCTATGTCCTCACCGGCTCGACAGATCGCGCTATTCACCTCTCC
CGGGCTATTCCCAACAATAACAATGCTGCCGCCGCAGAGACGACGTCCCC
GATCCAGAAGTATGAAGCGCACGGGTACTCTGTGTTGGACATTGCCGTCG
CAGCAGACAACTCCCGGTTCGCCAGCGTTGGTGGAGACCGCCAGGTTTTT
CTGTGGGATGTCGAGCAAGGTGGAACAATCAGGCGCTGGAGTGGACATAA
TGCGCGTGTTGAGGCAGTCCAATTCGCAGGCGAGGACGACTCTGTAGTTG
TGTCTGGTAAATTCGTCCTGATTTATATGCACGCTTTGGTTATGATCACT
GACGGGTTTTGCGTACGGTTTAGGCAGTGCAGACACAACTATCAACATCT
GGGATACCAAGTCCAACTCCTACAAGCCAATTCAGACCCTCACCGAAGCC
CGAGATACTGTTTCTTCCTTGCACGTACATATGCCCACGTACTCTATCGC
AAGCGCGAGCTACGATGGTCGAGTCCGAGTGTACGATATCCGAATGGGGC
GCACCCTTGTTGATGTTCTCGCGCATCCTGTTACTAGTGTTCGCTGCTCC
AGTGACGGCAATGCTCTTCTAGCATCTACAACAGACGGGCGCATCCGAAT
GCTGGACCGGAGTGACGGCAAGCTATTAAAGGCGTTTGGCGGCGACGATG
CCAGTCCAATCCAAGGTAATAGCACTGCCATATATCGCAAAAGCGAACTT
CGAATTCGCTCTGTTTTCGCGAAAGCAGACGCCATTGTCCTCAGCGGGAG
TGAAGCAAATGACTCCGGCAATGGCAATGGTGCTACGCAGGCGTCCGTAT
TCGCCTGGGATGTGCTTAGTGGAGAAGTGGTCGCGTGTGTTCCAGCTGGA
CCAGGCGTCAAGGCCGTGAGTGCTGTATCGTGGAATGAAAAAGGAGGTTG
CTGGGCTGGTGGTTGTTCAGATGGTATGTCTCAGCTATGGCAGTTTCCAA
TTTCGTTTGTGCAACCCTCCCCTCCCCTGGTTACGTTTGGTGACTATCTA
TCATACCTAGTTCTCGTTTTCAAACTCTGCACTGTACCTGTTTTCCTCAC
TGCGTGGCGCATTGCACGTGGCTAA
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Coding sequence (CDS) from alignment at An09:1181518..1182792-

>CBS51388_006278-T1 ID=CBS51388_006278-T1|Name=CBS51388_006278-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4248bp|location=Sequence derived from alignment at An09:1181518..1182792- (Aspergillus niger CBS 513.88)
TTCTCGTTTTCAAACTCTGCACTGTACCTGTTTTCCTCACTGCGTGGCGC
ATTGCACGTGGCTAAGCAGTGCAGACACAACTATCAACATCTGGGATACC
AAGTCCAACTCCTACAAGCCAATTCAGACCCTCACCGAAGCCCGAGATAC
TGTTTCTTCCTTGCACGTACATATGCCCACGTACTCTATCGCAAGCGCGA
GCTACGATGGTCGAGTCCGAGTGTACGATATCCGAATGGGGCGCACCCTT
GTTGATGTTCTCGCGCATCCTGTTACTAGTGTTCGCTGCTCCAGTGACGG
CAATGCTCTTCTAGCATCTACAACAGACGGGCGCATCCGAATGCTGGACC
GGAGTGACGGCAAGCTATTAAAGGCGTTTGGCGGCGACGATGCCAGTCCA
ATCCAAGGTAATAGCACTGCCATATATCGCAAAAGCGAACTTCGAATTCG
CTCTGTTTTCGCGAAAGCAGACGCCATTGTCCTCAGCGGGAGTGAAGCAA
ATGACTCCGGCAATGGCAATGGTGCTACGCAGGCGTCCGTATTCGCCTGG
GATGTGCTTAGTGGAGAAGTGGTCGCGTGTGTTCCAGCTGGACCAGGCGT
CAAGGCCGTGAGTGCTGTATCGTGGAATGAAAAAGGAGGTTGCTGGGCTG
GTGGTTGTTCAGATGGCCCCGTGAACGCAGTGACCTTCTCCAGCTATCCT
GGAACCTATGTCCTCACCGGCTCGACAGATCGCGCTATTCACCTCTCCCG
GGCTATTCCCAACAATAACAATGCTGCCGCCGCAGAGACGACGTCCCCGA
TCCAGAAGTATGAAGCGCACGGGTACTCTGTGTTGGACATTGCCGTCGCA
GCAGACAACTCCCGGTTCGCCAGCGTTGGTGGAGACCGCCAGGTTTTTCT
GTGGGATGTCGAGCAAGGTGGAACAATCAGGCGCTGGAGTGGACATAATG
CGCGTGTTGAGGCAGTCCAATTCGCAGGCGAGGACGACTCTGTAGTTGTG
TCTGATGCCAGCAATAAAACAATTCCCCACCCAACTGGCCCACACCCTCA
GAACCCACAATGTTCTCGTTTTCAAACTCTGCACTGTACCTGTTTTCCTC
ACTGCGTGGCGCATTGCACGTGGCTAAGCAGTGCAGACACAACTATCAAC
ATCTGGGATACCAAGTCCAACTCCTACAAGCCAATTCAGACCCTCACCGA
AGCCCGAGATACTGTTTCTTCCTTGCACGTACATATGCCCACGTACTCTA
TCGCAAGCGCGAGCTACGATGGTCGAGTCCGAGTGTACGATATCCGAATG
GGGCGCACCCTTGTTGATGTTCTCGCGCATCCTGTTACTAGTGTTCGCTG
CTCCAGTGACGGCAATGCTCTTCTAGCATCTACAACAGACGGGCGCATCC
GAATGCTGGACCGGAGTGACGGCAAGCTATTAAAGGCGTTTGGCGGCGAC
GATGCCAGTCCAATCCAAGGTAATAGCACTGCCATATATCGCAAAAGCGA
ACTTCGAATTCGCTCTGTTTTCGCGAAAGCAGACGCCATTGTCCTCAGCG
GGAGTGAAGCAAATGACTCCGGCAATGGCAATGGTGCTACGCAGGCGTCC
GTATTCGCCTGGGATGTGCTTAGTGGAGAAGTGGTCGCGTGTGTTCCAGC
TGGACCAGGCGTCAAGGCCGTGAGTGCTGTATCGTGGAATGAAAAAGGAG
GTTGCTGGGCTGGTGGTTGTTCAGATGGCCCCGTGAACGCAGTGACCTTC
TCCAGCTATCCTGGAACCTATGTCCTCACCGGCTCGACAGATCGCGCTAT
TCACCTCTCCCGGGCTATTCCCAACAATAACAATGCTGCCGCCGCAGAGA
CGACGTCCCCGATCCAGAAGTATGAAGCGCACGGGTACTCTGTGTTGGAC
ATTGCCGTCGCAGCAGACAACTCCCGGTTCGCCAGCGTTGGTGGAGACCG
CCAGGTTTTTCTGTGGGATGTCGAGCAAGGTGGAACAATCAGGCGCTGGA
GTGGACATAATGCGCGTGTTGAGGCAGTCCAATTCGCAGGCGAGGACGAC
TCTGTAGTTGTGTCTGATGCCAGCAATAAAACAATTCCCCACCCAACTGG
CCCACACCCTCAGAACCCACAATGTTCTCGTTTTCAAACTCTGCACTGTA
CCTGTTTTCCTCACTGCGTGGCGCATTGCACGTGGCTAAGCAGTGCAGAC
ACAACTATCAACATCTGGGATACCAAGTCCAACTCCTACAAGCCAATTCA
GACCCTCACCGAAGCCCGAGATACTGTTTCTTCCTTGCACGTACATATGC
CCACGTACTCTATCGCAAGCGCGAGCTACGATGGTCGAGTCCGAGTGTAC
GATATCCGAATGGGGCGCACCCTTGTTGATGTTCTCGCGCATCCTGTTAC
TAGTGTTCGCTGCTCCAGTGACGGCAATGCTCTTCTAGCATCTACAACAG
ACGGGCGCATCCGAATGCTGGACCGGAGTGACGGCAAGCTATTAAAGGCG
TTTGGCGGCGACGATGCCAGTCCAATCCAAGGTAATAGCACTGCCATATA
TCGCAAAAGCGAACTTCGAATTCGCTCTGTTTTCGCGAAAGCAGACGCCA
TTGTCCTCAGCGGGAGTGAAGCAAATGACTCCGGCAATGGCAATGGTGCT
ACGCAGGCGTCCGTATTCGCCTGGGATGTGCTTAGTGGAGAAGTGGTCGC
GTGTGTTCCAGCTGGACCAGGCGTCAAGGCCGTGAGTGCTGTATCGTGGA
ATGAAAAAGGAGGTTGCTGGGCTGGTGGTTGTTCAGATGGCCCCGTGAAC
GCAGTGACCTTCTCCAGCTATCCTGGAACCTATGTCCTCACCGGCTCGAC
AGATCGCGCTATTCACCTCTCCCGGGCTATTCCCAACAATAACAATGCTG
CCGCCGCAGAGACGACGTCCCCGATCCAGAAGTATGAAGCGCACGGGTAC
TCTGTGTTGGACATTGCCGTCGCAGCAGACAACTCCCGGTTCGCCAGCGT
TGGTGGAGACCGCCAGGTTTTTCTGTGGGATGTCGAGCAAGGTGGAACAA
TCAGGCGCTGGAGTGGACATAATGCGCGTGTTGAGGCAGTCCAATTCGCA
GGCGAGGACGACTCTGTAGTTGTGTCTGATGCCAGCAATAAAACAATTCC
CCACCCAACTGGCCCACACCCTCAGAACCCACAATGTTCTCGTTTTCAAA
CTCTGCACTGTACCTGTTTTCCTCACTGCGTGGCGCATTGCACGTGGCTA
AGCAGTGCAGACACAACTATCAACATCTGGGATACCAAGTCCAACTCCTA
CAAGCCAATTCAGACCCTCACCGAAGCCCGAGATACTGTTTCTTCCTTGC
ACGTACATATGCCCACGTACTCTATCGCAAGCGCGAGCTACGATGGTCGA
GTCCGAGTGTACGATATCCGAATGGGGCGCACCCTTGTTGATGTTCTCGC
GCATCCTGTTACTAGTGTTCGCTGCTCCAGTGACGGCAATGCTCTTCTAG
CATCTACAACAGACGGGCGCATCCGAATGCTGGACCGGAGTGACGGCAAG
CTATTAAAGGCGTTTGGCGGCGACGATGCCAGTCCAATCCAAGGTAATAG
CACTGCCATATATCGCAAAAGCGAACTTCGAATTCGCTCTGTTTTCGCGA
AAGCAGACGCCATTGTCCTCAGCGGGAGTGAAGCAAATGACTCCGGCAAT
GGCAATGGTGCTACGCAGGCGTCCGTATTCGCCTGGGATGTGCTTAGTGG
AGAAGTGGTCGCGTGTGTTCCAGCTGGACCAGGCGTCAAGGCCGTGAGTG
CTGTATCGTGGAATGAAAAAGGAGGTTGCTGGGCTGGTGGTTGTTCAGAT
GGCCCCGTGAACGCAGTGACCTTCTCCAGCTATCCTGGAACCTATGTCCT
CACCGGCTCGACAGATCGCGCTATTCACCTCTCCCGGGCTATTCCCAACA
ATAACAATGCTGCCGCCGCAGAGACGACGTCCCCGATCCAGAAGTATGAA
GCGCACGGGTACTCTGTGTTGGACATTGCCGTCGCAGCAGACAACTCCCG
GTTCGCCAGCGTTGGTGGAGACCGCCAGGTTTTTCTGTGGGATGTCGAGC
AAGGTGGAACAATCAGGCGCTGGAGTGGACATAATGCGCGTGTTGAGGCA
GTCCAATTCGCAGGCGAGGACGACTCTGTAGTTGTGTCTGATGCCAGCAA
TAAAACAATTCCCCACCCAACTGGCCCACACCCTCAGAACCCACAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006278CBS51388_006278Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006278-T1CBS51388_006278-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006278-T1.cdsCBS51388_006278-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006278-T1.exon4CBS51388_006278-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_006278-T1.exon3CBS51388_006278-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006278-T1.exon2CBS51388_006278-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006278-T1.exon1CBS51388_006278-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1181518..1182792 -
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