You are here

Home

CBS51388_006284-T1, CBS51388_006284-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006284-T1
Unique NameCBS51388_006284-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1198152..1199330+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006284-T1 ID=CBS51388_006284-T1|Name=CBS51388_006284-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1179bp|location=Sequence derived from alignment at An09:1198152..1199330+ (Aspergillus niger CBS 513.88)
ATGGGCTCTGGAACTTCCCCCCCTCCTCCTGGCCCGAAGCCTAGGTCTGC
CATACCTTCTCATATGCTGAATGGCGGCTCTCCTCTGCATGCCTCTACCA
GCCCCTCTACCAGCTCGCGCGATGCTCGGGAGAGGGAGAGTCTCAACTCC
TCCATCCTTTCGTCGTTTACTCCCCGCATCCCGGTTGAGTTCAACTTGCC
CGCCTCTGCCGCTCACCCTTCCGGGGAGTCCCTGGTGGATGATACCCCCC
GGGGCTCTACCTCTGCTAAGTATGTTGCGTCTGCGGGATGGTATCAATCA
ATTCACTAATTGCGCGATTCAGGCCGACATTGAACGACCCTCCCCGCGAT
CCGAGAGATGAGGCCGGTGCATTGACCCCGCCTGCGACTGTCAGCCGACC
TGCGAGCCCTTACACCCTCTTCCCTCCAATTGACTTTGATGGACTGAGCT
GGCCTTGTAAGTGATCATTGATGCGATTGGATATCATCGAGATCTAACGG
ATCCCTTCCTCAGGCCCTGGCACCAGGGAGCGACTGGAGTCGTCGCCCGA
AGAGACAGAGGAGCGCATTAAGAAGCTTGCAGGAGCTGTCAGGACGATTT
TGGAGTGTGTTGGAGAGGATCCGGAAAGAGAGGGCCTGCGCGAAACCCCA
GAGCGATATGCCAAGGCCATGCTCTACTTTACCAAGGGTTATGAGGAGAA
TGTTCGGGATCTTGTCAATGGTGCGGTCTTCCATGAAGATCATGACGAGC
TGGTGATTGTCAAAGATATCGAGGTGTTCTCGCTGTGCGAGCACCACATG
GTTCCCTTCACTGGAAAGGTAAGACTGCTCTTTTCGGTACGAGATTCAGT
AATGCTAACCAACACTTCTTCGGTAGATGCACATTGGTTATATTCCTGAC
CGCCGCGTGCTTGGTCTCTCCAAGTTGGCTCGTCTGGCGGAAATGTTCTC
TCGTCGTCTCCAGGTGCAAGAGCGCTTGACCAAGCAGGTCGCTCTGGCTA
TTTCCGAGGTTCTGAAACCACGTGGTGTTGGTGTTGTCATGGAGTCGTCC
CATCTGTGCATGGTGATGCGTGGTGTGCAAAAGACTAGCAGCACTACCAC
GACCAGCTGTATGCTTGGCTGCATGCGGTCGAGCGCAAAGACCCGGGAGG
AGTTCCTGACTCTGCTGCACCGCCGATAA
back to top

Coding sequence (CDS) from alignment at An09:1198152..1199330+

>CBS51388_006284-T1 ID=CBS51388_006284-T1|Name=CBS51388_006284-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4044bp|location=Sequence derived from alignment at An09:1198152..1199330+ (Aspergillus niger CBS 513.88)
ATGGGCTCTGGAACTTCCCCCCCTCCTCCTGGCCCGAAGCCTAGGTCTGC
CATACCTTCTCATATGCTGAATGGCGGCTCTCCTCTGCATGCCTCTACCA
GCCCCTCTACCAGCTCGCGCGATGCTCGGGAGAGGGAGAGTCTCAACTCC
TCCATCCTTTCGTCGTTTACTCCCCGCATCCCGGTTGAGTTCAACTTGCC
CGCCTCTGCCGCTCACCCTTCCGGGGAGTCCCTGGTGGATGATACCCCCC
GGGGCTCTACCTCTGCTAAGCCGACATTGAACGACCCTCCCCGCGATCCG
AGAGATGAGGCCGGTGCATTGACCCCGCCTGCGACTGTCAGCCGACCTGC
GAGCCCTTACACCCTCTTCCCTCCAATTGACTTTGATGGACTGAGCTGGC
CTTGCCCTGGCACCAGGGAGCGACTGGAGTCGTCGCCCGAAGAGACAGAG
GAGCGCATTAAGAAGCTTGCAGGAGCTGTCAGGACGATTTTGGAGTGTGT
TGGAGAGGATCCGGAAAGAGAGGGCCTGCGCGAAACCCCAGAGCGATATG
CCAAGGCCATGCTCTACTTTACCAAGGGTTATGAGGAGAATGTTCGGGAT
CTTGTCAATGGTGCGGTCTTCCATGAAGATCATGACGAGCTGGTGATTGT
CAAAGATATCGAGGTGTTCTCGCTGTGCGAGCACCACATGGTTCCCTTCA
CTGGAAAGATGCACATTGGTTATATTCCTGACCGCCGCGTGCTTGGTCTC
TCCAAGTTGGCTCGTCTGGCGGAAATGTTCTCTCGTCGTCTCCAGGTGCA
AGAGCGCTTGACCAAGCAGGTCGCTCTGGCTATTTCCGAGGTTCTGAAAC
CACGTGGTGTTGGTGTTGTCATGGAGTCGTCCCATCTGTGCATGGTGATG
CGTGGTGTGCAAAAGACTAGCAGCACTACCACGACCAGCTGTATGCTTGG
CTGCATGCGGTCGAGCGCAAAGACCCGGGAGGAGTTCCTGACTCTGCTGC
ACCGCCGATAAATGGGCTCTGGAACTTCCCCCCCTCCTCCTGGCCCGAAG
CCTAGGTCTGCCATACCTTCTCATATGCTGAATGGCGGCTCTCCTCTGCA
TGCCTCTACCAGCCCCTCTACCAGCTCGCGCGATGCTCGGGAGAGGGAGA
GTCTCAACTCCTCCATCCTTTCGTCGTTTACTCCCCGCATCCCGGTTGAG
TTCAACTTGCCCGCCTCTGCCGCTCACCCTTCCGGGGAGTCCCTGGTGGA
TGATACCCCCCGGGGCTCTACCTCTGCTAAGCCGACATTGAACGACCCTC
CCCGCGATCCGAGAGATGAGGCCGGTGCATTGACCCCGCCTGCGACTGTC
AGCCGACCTGCGAGCCCTTACACCCTCTTCCCTCCAATTGACTTTGATGG
ACTGAGCTGGCCTTGCCCTGGCACCAGGGAGCGACTGGAGTCGTCGCCCG
AAGAGACAGAGGAGCGCATTAAGAAGCTTGCAGGAGCTGTCAGGACGATT
TTGGAGTGTGTTGGAGAGGATCCGGAAAGAGAGGGCCTGCGCGAAACCCC
AGAGCGATATGCCAAGGCCATGCTCTACTTTACCAAGGGTTATGAGGAGA
ATGTTCGGGATCTTGTCAATGGTGCGGTCTTCCATGAAGATCATGACGAG
CTGGTGATTGTCAAAGATATCGAGGTGTTCTCGCTGTGCGAGCACCACAT
GGTTCCCTTCACTGGAAAGATGCACATTGGTTATATTCCTGACCGCCGCG
TGCTTGGTCTCTCCAAGTTGGCTCGTCTGGCGGAAATGTTCTCTCGTCGT
CTCCAGGTGCAAGAGCGCTTGACCAAGCAGGTCGCTCTGGCTATTTCCGA
GGTTCTGAAACCACGTGGTGTTGGTGTTGTCATGGAGTCGTCCCATCTGT
GCATGGTGATGCGTGGTGTGCAAAAGACTAGCAGCACTACCACGACCAGC
TGTATGCTTGGCTGCATGCGGTCGAGCGCAAAGACCCGGGAGGAGTTCCT
GACTCTGCTGCACCGCCGATAAATGGGCTCTGGAACTTCCCCCCCTCCTC
CTGGCCCGAAGCCTAGGTCTGCCATACCTTCTCATATGCTGAATGGCGGC
TCTCCTCTGCATGCCTCTACCAGCCCCTCTACCAGCTCGCGCGATGCTCG
GGAGAGGGAGAGTCTCAACTCCTCCATCCTTTCGTCGTTTACTCCCCGCA
TCCCGGTTGAGTTCAACTTGCCCGCCTCTGCCGCTCACCCTTCCGGGGAG
TCCCTGGTGGATGATACCCCCCGGGGCTCTACCTCTGCTAAGCCGACATT
GAACGACCCTCCCCGCGATCCGAGAGATGAGGCCGGTGCATTGACCCCGC
CTGCGACTGTCAGCCGACCTGCGAGCCCTTACACCCTCTTCCCTCCAATT
GACTTTGATGGACTGAGCTGGCCTTGCCCTGGCACCAGGGAGCGACTGGA
GTCGTCGCCCGAAGAGACAGAGGAGCGCATTAAGAAGCTTGCAGGAGCTG
TCAGGACGATTTTGGAGTGTGTTGGAGAGGATCCGGAAAGAGAGGGCCTG
CGCGAAACCCCAGAGCGATATGCCAAGGCCATGCTCTACTTTACCAAGGG
TTATGAGGAGAATGTTCGGGATCTTGTCAATGGTGCGGTCTTCCATGAAG
ATCATGACGAGCTGGTGATTGTCAAAGATATCGAGGTGTTCTCGCTGTGC
GAGCACCACATGGTTCCCTTCACTGGAAAGATGCACATTGGTTATATTCC
TGACCGCCGCGTGCTTGGTCTCTCCAAGTTGGCTCGTCTGGCGGAAATGT
TCTCTCGTCGTCTCCAGGTGCAAGAGCGCTTGACCAAGCAGGTCGCTCTG
GCTATTTCCGAGGTTCTGAAACCACGTGGTGTTGGTGTTGTCATGGAGTC
GTCCCATCTGTGCATGGTGATGCGTGGTGTGCAAAAGACTAGCAGCACTA
CCACGACCAGCTGTATGCTTGGCTGCATGCGGTCGAGCGCAAAGACCCGG
GAGGAGTTCCTGACTCTGCTGCACCGCCGATAAATGGGCTCTGGAACTTC
CCCCCCTCCTCCTGGCCCGAAGCCTAGGTCTGCCATACCTTCTCATATGC
TGAATGGCGGCTCTCCTCTGCATGCCTCTACCAGCCCCTCTACCAGCTCG
CGCGATGCTCGGGAGAGGGAGAGTCTCAACTCCTCCATCCTTTCGTCGTT
TACTCCCCGCATCCCGGTTGAGTTCAACTTGCCCGCCTCTGCCGCTCACC
CTTCCGGGGAGTCCCTGGTGGATGATACCCCCCGGGGCTCTACCTCTGCT
AAGCCGACATTGAACGACCCTCCCCGCGATCCGAGAGATGAGGCCGGTGC
ATTGACCCCGCCTGCGACTGTCAGCCGACCTGCGAGCCCTTACACCCTCT
TCCCTCCAATTGACTTTGATGGACTGAGCTGGCCTTGCCCTGGCACCAGG
GAGCGACTGGAGTCGTCGCCCGAAGAGACAGAGGAGCGCATTAAGAAGCT
TGCAGGAGCTGTCAGGACGATTTTGGAGTGTGTTGGAGAGGATCCGGAAA
GAGAGGGCCTGCGCGAAACCCCAGAGCGATATGCCAAGGCCATGCTCTAC
TTTACCAAGGGTTATGAGGAGAATGTTCGGGATCTTGTCAATGGTGCGGT
CTTCCATGAAGATCATGACGAGCTGGTGATTGTCAAAGATATCGAGGTGT
TCTCGCTGTGCGAGCACCACATGGTTCCCTTCACTGGAAAGATGCACATT
GGTTATATTCCTGACCGCCGCGTGCTTGGTCTCTCCAAGTTGGCTCGTCT
GGCGGAAATGTTCTCTCGTCGTCTCCAGGTGCAAGAGCGCTTGACCAAGC
AGGTCGCTCTGGCTATTTCCGAGGTTCTGAAACCACGTGGTGTTGGTGTT
GTCATGGAGTCGTCCCATCTGTGCATGGTGATGCGTGGTGTGCAAAAGAC
TAGCAGCACTACCACGACCAGCTGTATGCTTGGCTGCATGCGGTCGAGCG
CAAAGACCCGGGAGGAGTTCCTGACTCTGCTGCACCGCCGATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0046654tetrahydrofolate biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003934GTP cyclohydrolase I activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GCH1CBS51388_006284Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006284-T1.exon1CBS51388_006284-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006284-T1.exon2CBS51388_006284-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006284-T1.exon3CBS51388_006284-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006284-T1.exon4CBS51388_006284-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006284-T1.cdsCBS51388_006284-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006284-T1CBS51388_006284-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018234
DBxrefInterPro:IPR020602
DBxrefInterPro:IPR043134
DBxrefInterPro:IPR001474
DBxrefInterPro:IPR043133
DBxrefPFAM:PF01227
ProductGTP cyclohydrolase 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1198152..1199330 +
Powered by Drupal