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CBS51388_006292-T1, CBS51388_006292-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006292-T1
Unique NameCBS51388_006292-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1226722..1227937+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006292-T1 ID=CBS51388_006292-T1|Name=CBS51388_006292-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1216bp|location=Sequence derived from alignment at An09:1226722..1227937+ (Aspergillus niger CBS 513.88)
ATGGATAACGCAAACCTCTGGACTCGCCGATCCAAGTACGTCCCACTCCG
ACACGATGACTTTGCCCGCATGCTTGTGTGGCTGATGCGACTCAACTAAC
CTGTTTAATCTTTTGTTCCTATCTATAGCACCTCCAAGTTGTCTCTGTCT
ATGACGGGGACGGACGGCGCTCGAGTTGAACTTCCCCGCGCCACCAAGCG
TTTCGGCCCCGACAGCTCCCACGGCGGCCGGTCCAACCCTTTCAACGCCC
TCTCCCCCCTCTCCGGCGGCGTGTCCTCTCCGTCTACAAACGCCTCCTCT
GCATTCGGCCTGGGCTCCGGTGCCTTTGCGTCGTTTGGAACCCCCAAAAC
CCCCGGTGCACCTTCCGACCTGAAAACTCCCGGCGAGAAGCGTGAAAACC
CTGTCGACCAGGTTTCCGCTGCTGAGGCCGGCAAACCTAAGGGCGCTGCC
TTGACGCTCAAGGAGCACCCGCTCAAGTCCACTTGGATTATCTGGTACCG
GCCTCCCACACCTAAATACTCCGATTACGAAAAGTCTACCGCTCCGCTTG
CATCCATATCATCAGTAGAGAGTTTCTGGTCGATCTATTCGCACCTAAAG
AGGCCCTCTCTGCTCCCCACAGTCTCCGACTACCATATCTTCAAAAAGGG
CATCCGTCCGGTATGGGAGGACGAGGCCAATAAGAGAGGTGGAAAATGGG
TGGTGAGGCTGAAGAAGGGGGTTGCGGATCGCTACTGGGAGGATCTCCTC
CTGGCTATGATCGGTGACCAGTTTGCAGAGGCTAGTGATGAGGTTTGTGG
TGCGGTGCTCAGTGTGCGGAGCGGGGAGGATGTTCTGAATGTGTGGACCC
GCATCGATGGCGGGCGGAACATCAAGATCAGGTATGTCATACGTGGACAC
ATCCCGTTGGAAGTGACATCGCAAGTTTACTAACGTGTTCTGCAGAGAGA
CAATCAAACGTCTGCTGAACTTCCCGGCCGACACCAATATCGTCTGGAAG
AGTCATGACGACAGTATCGCCCAACGTTCGGCCATCGACCAGGCTCGCCA
GGAGAAGGCCGCCGGAAACGCCGGTCATCACCACCATCACCATCACCATC
ACCACCACCACAACAACAACAACAACCACAATCACAACCAGCAAAACCAG
CTGGGCGATCGACGAAGAGTTACGGCGAATGACGAGGGGGATAAAGGAAA
AGGCACGACATCTTGA
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Coding sequence (CDS) from alignment at An09:1226722..1227937+

>CBS51388_006292-T1 ID=CBS51388_006292-T1|Name=CBS51388_006292-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3177bp|location=Sequence derived from alignment at An09:1226722..1227937+ (Aspergillus niger CBS 513.88)
ATGGATAACGCAAACCTCTGGACTCGCCGATCCAACACCTCCAAGTTGTC
TCTGTCTATGACGGGGACGGACGGCGCTCGAGTTGAACTTCCCCGCGCCA
CCAAGCGTTTCGGCCCCGACAGCTCCCACGGCGGCCGGTCCAACCCTTTC
AACGCCCTCTCCCCCCTCTCCGGCGGCGTGTCCTCTCCGTCTACAAACGC
CTCCTCTGCATTCGGCCTGGGCTCCGGTGCCTTTGCGTCGTTTGGAACCC
CCAAAACCCCCGGTGCACCTTCCGACCTGAAAACTCCCGGCGAGAAGCGT
GAAAACCCTGTCGACCAGGTTTCCGCTGCTGAGGCCGGCAAACCTAAGGG
CGCTGCCTTGACGCTCAAGGAGCACCCGCTCAAGTCCACTTGGATTATCT
GGTACCGGCCTCCCACACCTAAATACTCCGATTACGAAAAGTCTACCGCT
CCGCTTGCATCCATATCATCAGTAGAGAGTTTCTGGTCGATCTATTCGCA
CCTAAAGAGGCCCTCTCTGCTCCCCACAGTCTCCGACTACCATATCTTCA
AAAAGGGCATCCGTCCGGTATGGGAGGACGAGGCCAATAAGAGAGGTGGA
AAATGGGTGGTGAGGCTGAAGAAGGGGGTTGCGGATCGCTACTGGGAGGA
TCTCCTCCTGGCTATGATCGGTGACCAGTTTGCAGAGGCTAGTGATGAGG
TTTGTGGTGCGGTGCTCAGTGTGCGGAGCGGGGAGGATGTTCTGAATGTG
TGGACCCGCATCGATGGCGGGCGGAACATCAAGATCAGAGAGACAATCAA
ACGTCTGCTGAACTTCCCGGCCGACACCAATATCGTCTGGAAGAGTCATG
ACGACAGTATCGCCCAACGTTCGGCCATCGACCAGGCTCGCCAGGAGAAG
GCCGCCGGAAACGCCGGTCATCACCACCATCACCATCACCATCACCACCA
CCACAACAACAACAACAACCACAATCACAACCAGCAAAACCAGCTGGGCG
ATCGACGAAGAGTTACGGCGAATGACGAGGGGGATAAAGGAAAAGGCACG
ACATCTTGAATGGATAACGCAAACCTCTGGACTCGCCGATCCAACACCTC
CAAGTTGTCTCTGTCTATGACGGGGACGGACGGCGCTCGAGTTGAACTTC
CCCGCGCCACCAAGCGTTTCGGCCCCGACAGCTCCCACGGCGGCCGGTCC
AACCCTTTCAACGCCCTCTCCCCCCTCTCCGGCGGCGTGTCCTCTCCGTC
TACAAACGCCTCCTCTGCATTCGGCCTGGGCTCCGGTGCCTTTGCGTCGT
TTGGAACCCCCAAAACCCCCGGTGCACCTTCCGACCTGAAAACTCCCGGC
GAGAAGCGTGAAAACCCTGTCGACCAGGTTTCCGCTGCTGAGGCCGGCAA
ACCTAAGGGCGCTGCCTTGACGCTCAAGGAGCACCCGCTCAAGTCCACTT
GGATTATCTGGTACCGGCCTCCCACACCTAAATACTCCGATTACGAAAAG
TCTACCGCTCCGCTTGCATCCATATCATCAGTAGAGAGTTTCTGGTCGAT
CTATTCGCACCTAAAGAGGCCCTCTCTGCTCCCCACAGTCTCCGACTACC
ATATCTTCAAAAAGGGCATCCGTCCGGTATGGGAGGACGAGGCCAATAAG
AGAGGTGGAAAATGGGTGGTGAGGCTGAAGAAGGGGGTTGCGGATCGCTA
CTGGGAGGATCTCCTCCTGGCTATGATCGGTGACCAGTTTGCAGAGGCTA
GTGATGAGGTTTGTGGTGCGGTGCTCAGTGTGCGGAGCGGGGAGGATGTT
CTGAATGTGTGGACCCGCATCGATGGCGGGCGGAACATCAAGATCAGAGA
GACAATCAAACGTCTGCTGAACTTCCCGGCCGACACCAATATCGTCTGGA
AGAGTCATGACGACAGTATCGCCCAACGTTCGGCCATCGACCAGGCTCGC
CAGGAGAAGGCCGCCGGAAACGCCGGTCATCACCACCATCACCATCACCA
TCACCACCACCACAACAACAACAACAACCACAATCACAACCAGCAAAACC
AGCTGGGCGATCGACGAAGAGTTACGGCGAATGACGAGGGGGATAAAGGA
AAAGGCACGACATCTTGAATGGATAACGCAAACCTCTGGACTCGCCGATC
CAACACCTCCAAGTTGTCTCTGTCTATGACGGGGACGGACGGCGCTCGAG
TTGAACTTCCCCGCGCCACCAAGCGTTTCGGCCCCGACAGCTCCCACGGC
GGCCGGTCCAACCCTTTCAACGCCCTCTCCCCCCTCTCCGGCGGCGTGTC
CTCTCCGTCTACAAACGCCTCCTCTGCATTCGGCCTGGGCTCCGGTGCCT
TTGCGTCGTTTGGAACCCCCAAAACCCCCGGTGCACCTTCCGACCTGAAA
ACTCCCGGCGAGAAGCGTGAAAACCCTGTCGACCAGGTTTCCGCTGCTGA
GGCCGGCAAACCTAAGGGCGCTGCCTTGACGCTCAAGGAGCACCCGCTCA
AGTCCACTTGGATTATCTGGTACCGGCCTCCCACACCTAAATACTCCGAT
TACGAAAAGTCTACCGCTCCGCTTGCATCCATATCATCAGTAGAGAGTTT
CTGGTCGATCTATTCGCACCTAAAGAGGCCCTCTCTGCTCCCCACAGTCT
CCGACTACCATATCTTCAAAAAGGGCATCCGTCCGGTATGGGAGGACGAG
GCCAATAAGAGAGGTGGAAAATGGGTGGTGAGGCTGAAGAAGGGGGTTGC
GGATCGCTACTGGGAGGATCTCCTCCTGGCTATGATCGGTGACCAGTTTG
CAGAGGCTAGTGATGAGGTTTGTGGTGCGGTGCTCAGTGTGCGGAGCGGG
GAGGATGTTCTGAATGTGTGGACCCGCATCGATGGCGGGCGGAACATCAA
GATCAGAGAGACAATCAAACGTCTGCTGAACTTCCCGGCCGACACCAATA
TCGTCTGGAAGAGTCATGACGACAGTATCGCCCAACGTTCGGCCATCGAC
CAGGCTCGCCAGGAGAAGGCCGCCGGAAACGCCGGTCATCACCACCATCA
CCATCACCATCACCACCACCACAACAACAACAACAACCACAATCACAACC
AGCAAAACCAGCTGGGCGATCGACGAAGAGTTACGGCGAATGACGAGGGG
GATAAAGGAAAAGGCACGACATCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006292CBS51388_006292Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006292-T1.exon1CBS51388_006292-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006292-T1.exon2CBS51388_006292-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006292-T1.exon3CBS51388_006292-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006292-T1.cdsCBS51388_006292-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006292-T1CBS51388_006292-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019770
DBxrefInterPro:IPR001040
DBxrefInterPro:IPR023398
DBxrefPFAM:PF01652
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1226722..1227937 +
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