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CBS51388_006295-T1, CBS51388_006295-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006295-T1
Unique NameCBS51388_006295-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1235669..1236641+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006295-T1 ID=CBS51388_006295-T1|Name=CBS51388_006295-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=973bp|location=Sequence derived from alignment at An09:1235669..1236641+ (Aspergillus niger CBS 513.88)
ATGCATTCCACCCTCAACCGCGCCCAAGGCGTCTTCGGCTTCTTCACGAC
AGTCGCTCTCTTCGTCGCCGGTCTCGCGGCTCTCAGCGTGTTTCTCTATC
CTACTGACGATGTGACATCCAGTGTGAAGTTGCGCGATGTGAAAGTGTAC
GTGTACCATCTTTCTCCAATCGAATCCAATCCCACCCAATCCAATACCTA
CTACAACAACAACAACAACACAACTACCCCCATAAGCAAGAAGAATGGAA
TAACTAACACAACCAACCCAACAGAACAAAAGGCCGTCCCCACTACTACA
GCACGCGAAAGGAAGAATACGCCGCCATGAAATTCGACCTAGACGCTGGT
ACTTCCATCCCTCCCCCCTCCCCCCTGCTCCTCAACTTCCCCAACACCAC
CACCACCACTACACTAATACTAACCATTCCCTCAATGAACCCAAAGACTT
AACCCCCCTCTTCAACTGGAACACCAAACAACTCTTCGTCTACGTCTACG
CCACCTACCCTTCCGACCCCTCGAATCCAACCACCTCCGCGCCCTCCCAC
TCCGTCATCTGGGACACTATCATCCCCGCCCCGGAGTCGCCTTACTCCTT
TAATGCCCTGCGCGAGAAGTTCTTCCCTTCTGCATCATCTGCGAACAAGA
AGCGCAGCACGAAGAAGACGTCCACTACTAGCAAAACTGCCAAGAAGGCA
TCTGAGCCCGGGAAGCTGAGACTCCGCGACCAGAGAGCCAAGTACTCTAT
CGGAGATGTTTCGGGGAAGATGGCCGAACGGGAGAATGTCACTCTCTCTG
TGGGGTGGAATGTGCAGCCGTGGGTTGGGGCGCTGTGGTGGGCTCCGGAG
ACTGGGGGTGCGATGAGGACGAAGGGCGATGTCGGGACGAGTAAGGCTTT
TGGGCTGCCGGCGCTGAAGGGCAGGAATGTTGGGACTGCTTCTGCTGCTG
GTGCTGGTGCCGGGGCGGCGTAG
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Coding sequence (CDS) from alignment at An09:1235669..1236641+

>CBS51388_006295-T1 ID=CBS51388_006295-T1|Name=CBS51388_006295-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2241bp|location=Sequence derived from alignment at An09:1235669..1236641+ (Aspergillus niger CBS 513.88)
ATGCATTCCACCCTCAACCGCGCCCAAGGCGTCTTCGGCTTCTTCACGAC
AGTCGCTCTCTTCGTCGCCGGTCTCGCGGCTCTCAGCGTGTTTCTCTATC
CTACTGACGATGTGACATCCAGTGTGAAGTTGCGCGATGTGAAAGTAACA
AAAGGCCGTCCCCACTACTACAGCACGCGAAAGGAAGAATACGCCGCCAT
GAAATTCGACCTAGACGCTGACTTAACCCCCCTCTTCAACTGGAACACCA
AACAACTCTTCGTCTACGTCTACGCCACCTACCCTTCCGACCCCTCGAAT
CCAACCACCTCCGCGCCCTCCCACTCCGTCATCTGGGACACTATCATCCC
CGCCCCGGAGTCGCCTTACTCCTTTAATGCCCTGCGCGAGAAGTTCTTCC
CTTCTGCATCATCTGCGAACAAGAAGCGCAGCACGAAGAAGACGTCCACT
ACTAGCAAAACTGCCAAGAAGGCATCTGAGCCCGGGAAGCTGAGACTCCG
CGACCAGAGAGCCAAGTACTCTATCGGAGATGTTTCGGGGAAGATGGCCG
AACGGGAGAATGTCACTCTCTCTGTGGGGTGGAATGTGCAGCCGTGGGTT
GGGGCGCTGTGGTGGGCTCCGGAGACTGGGGGTGCGATGAGGACGAAGGG
CGATGTCGGGACGAGTAAGGCTTTTGGGCTGCCGGCGCTGAAGGGCAGGA
ATGTTGGGACTGCTTCTGCTGCTGGTGCTGGTGCCGGGGCGGCGTAGATG
CATTCCACCCTCAACCGCGCCCAAGGCGTCTTCGGCTTCTTCACGACAGT
CGCTCTCTTCGTCGCCGGTCTCGCGGCTCTCAGCGTGTTTCTCTATCCTA
CTGACGATGTGACATCCAGTGTGAAGTTGCGCGATGTGAAAGTAACAAAA
GGCCGTCCCCACTACTACAGCACGCGAAAGGAAGAATACGCCGCCATGAA
ATTCGACCTAGACGCTGACTTAACCCCCCTCTTCAACTGGAACACCAAAC
AACTCTTCGTCTACGTCTACGCCACCTACCCTTCCGACCCCTCGAATCCA
ACCACCTCCGCGCCCTCCCACTCCGTCATCTGGGACACTATCATCCCCGC
CCCGGAGTCGCCTTACTCCTTTAATGCCCTGCGCGAGAAGTTCTTCCCTT
CTGCATCATCTGCGAACAAGAAGCGCAGCACGAAGAAGACGTCCACTACT
AGCAAAACTGCCAAGAAGGCATCTGAGCCCGGGAAGCTGAGACTCCGCGA
CCAGAGAGCCAAGTACTCTATCGGAGATGTTTCGGGGAAGATGGCCGAAC
GGGAGAATGTCACTCTCTCTGTGGGGTGGAATGTGCAGCCGTGGGTTGGG
GCGCTGTGGTGGGCTCCGGAGACTGGGGGTGCGATGAGGACGAAGGGCGA
TGTCGGGACGAGTAAGGCTTTTGGGCTGCCGGCGCTGAAGGGCAGGAATG
TTGGGACTGCTTCTGCTGCTGGTGCTGGTGCCGGGGCGGCGTAGATGCAT
TCCACCCTCAACCGCGCCCAAGGCGTCTTCGGCTTCTTCACGACAGTCGC
TCTCTTCGTCGCCGGTCTCGCGGCTCTCAGCGTGTTTCTCTATCCTACTG
ACGATGTGACATCCAGTGTGAAGTTGCGCGATGTGAAAGTAACAAAAGGC
CGTCCCCACTACTACAGCACGCGAAAGGAAGAATACGCCGCCATGAAATT
CGACCTAGACGCTGACTTAACCCCCCTCTTCAACTGGAACACCAAACAAC
TCTTCGTCTACGTCTACGCCACCTACCCTTCCGACCCCTCGAATCCAACC
ACCTCCGCGCCCTCCCACTCCGTCATCTGGGACACTATCATCCCCGCCCC
GGAGTCGCCTTACTCCTTTAATGCCCTGCGCGAGAAGTTCTTCCCTTCTG
CATCATCTGCGAACAAGAAGCGCAGCACGAAGAAGACGTCCACTACTAGC
AAAACTGCCAAGAAGGCATCTGAGCCCGGGAAGCTGAGACTCCGCGACCA
GAGAGCCAAGTACTCTATCGGAGATGTTTCGGGGAAGATGGCCGAACGGG
AGAATGTCACTCTCTCTGTGGGGTGGAATGTGCAGCCGTGGGTTGGGGCG
CTGTGGTGGGCTCCGGAGACTGGGGGTGCGATGAGGACGAAGGGCGATGT
CGGGACGAGTAAGGCTTTTGGGCTGCCGGCGCTGAAGGGCAGGAATGTTG
GGACTGCTTCTGCTGCTGGTGCTGGTGCCGGGGCGGCGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005787signal peptidase complex
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006465signal peptide processing
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006295CBS51388_006295Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006295-T1.exon1CBS51388_006295-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006295-T1.exon2CBS51388_006295-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006295-T1.exon3CBS51388_006295-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006295-T1.cdsCBS51388_006295-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006295-T1CBS51388_006295-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007653
DBxrefPFAM:PF04573
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1235669..1236641 +
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