You are here

Home

CBS51388_006321-T1, CBS51388_006321-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006321-T1
Unique NameCBS51388_006321-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1320575..1321987+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006321-T1 ID=CBS51388_006321-T1|Name=CBS51388_006321-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1413bp|location=Sequence derived from alignment at An09:1320575..1321987+ (Aspergillus niger CBS 513.88)
ATGGGTACCCACATACTAACCCTCCAGATACTACACTCCAACCTTCCCGA
TATATACTACTCCGCACCACCTCCACTCTCATTTTAGACTCACAACATCA
CACTCAACATCATATTATCACTCCCCTACCACTCAATCGCACAAGTACCA
CTAGCATACAGCAACTACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTGCGGCAACAAATACCGCAAACTCGAGTAC
CTAATACCCGACATTCTCTCACCAACACCCAAATATGGCTCTCTAGCACC
AGGACCTGACCACGGCACTCTCACCACCCCACCACAACCACAACCACCAA
AGAAGACAGAAAAGGACGTAACCCTAGTAACAGAAGGCGCCCTCCAAAGC
AATCATACCATCCAAGTAACCAGCATCGCAAACCACCTGAACCTCTCACG
GCCCGTGATTATCCTTCACAAGGCCACAGGGGGTGGATACGCCCAAGCAA
CAGATAAGAGTCTCTTCGAGAGAACGGGAAATGTGCAGATAGCGAAGCTA
TTAGGGGCTGATGTGAGGGTGTTGGACTCGGCGACTGTTTCAACATCTTC
TACAAGTAAAGAAGAAAAGGAAGAAGAAGAAGAAGAAGACGGAGTCCACT
CCATCCTCACGACCCTCCAAAATGAAGGCAAAAATCCCTACTGGATCCCC
TCAGGAGCAAGTCTCCACCCACTAGGTGGATTGGGGTACGCAAGATGCGC
ATTCGAGATTGCATTGCAGGAGAAACAACCGCAATCACTGTCACAACCAG
AGGGTTCAAACCTCGGCAGATTCGACTACATCTTTCTCGCCTGCGGCAGC
GGCAGCACCCACGGCGGGCTCATCGCCGGTCTGAAACTTCTCGAGAAACA
AGAAACCACCACCACCACCACCACCACCACCACCACTTCCCTACCGCCCC
GGAAAATCATAGGCATCCTCACATCCCCGACTCGCTCACGCAGCTACCAC
GAAAACAGAGTATTACAGTTTGCGCGACAAGCGGGAAGACTTATCGGGCT
TGAAGATGTGGAGAGGGAGATAACCATGCAGGATGTGCATATTGATGAGC
GGTTTGCGGGCACGGCGTATGGAGAAGTGGATGATGCGACGAGGGATATG
ATGCGGTTGATGGCAAGAGAGGAAGCGGTGTTGTTGGATCCGGTGTATAC
GGGGAAGGTGGCGAGGGGGATGGTGCATTGGGTGAGGGAGGGGGAGATTT
CCAGGGATTGGGTTGCGCGAGGGGGATGGGAAAGGGATGGAGGTAATGTT
AAGGTGTTGATGGTACATACGGGGGGACAGTCTGCTTTGAGTGCGTATGC
AGATGTTGTGTAG
back to top

Coding sequence (CDS) from alignment at An09:1320575..1321987+

>CBS51388_006321-T1 ID=CBS51388_006321-T1|Name=CBS51388_006321-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2142bp|location=Sequence derived from alignment at An09:1320575..1321987+ (Aspergillus niger CBS 513.88)
ATGGCACCAGGACCTGACCACGGCACTCTCACCACCCCACCACAACCACA
ACCACCAAAGAAGACAGAAAAGGACGTAACCCTAGTAACAGAAGGCGCCC
TCCAAAGCAATCATACCATCCAAGTAACCAGCATCGCAAACCACCTGAAC
CTCTCACGGCCCGTGATTATCCTTCACAAGGCCACAGGGGGTGGATACGC
CCAAGCAACAGATAAGAGTCTCTTCGAGAGAACGGGAAATGTGCAGATAG
CGAAGCTATTAGGGGCTGATGTGAGGGTGTTGGACTCGGCGACTGTTTCA
ACATCTTCTACAAGTAAAGAAGAAAAGGAAGAAGAAGAAGAAGAAGACGG
AGTCCACTCCATCCTCACGACCCTCCAAAATGAAGGCAAAAATCCCTACT
GGATCCCCTCAGGAGCAAGTCTCCACCCACTAGGTGGATTGGGGTACGCA
AGATGCGCATTCGAGATTGCATTGCAGGAGAAACAACCGCAATCACTGTC
ACAACCAGAGGGTTCAAACCTCGGCAGATTCGACTACATCTTTCTCGCCT
GCGGCAGCGGCAGCACCCACGGCGGGCTCATCGCCGGTCTGAAACTTCTC
GAGAAACAAGAAACCACCACCACCACCACCACCACCACCACCACTTCCCT
ACCGCCCCGGAAAATCATAGGCATCCTCACATCCCCGACTCGCTCACGCA
GCTACCACGAAAACAGAGTATTACAGTTTGCGCGACAAGCGGGAAGACTT
ATCGGGCTTGAAGATGTGGAGAGGGAGATAACCATGCAGGATGTGCATAT
TGATGAGCGGTTTGCGGGCACGGCGTATGGAGAAGTGGATGATGCGACGA
GGGATATGATGCGGTTGATGGCAAGAGAGGAAGCGGTGTTGTTGGATCCG
GTGTATACGGGGAAGGTGGCGAGGGGGATGGTGCATTGGGTGAGGGAGGG
GGAGATTTCCAGGGATTGGGTTGCGCGAGGGGGATGGGAAAGGGATGGAG
GTAATGTTAAGGTGTTGATGGTACATACGGGGGGACAGTCTGCTTTGAGT
GCGTATGCAGATGTTGTGTAGATGGCACCAGGACCTGACCACGGCACTCT
CACCACCCCACCACAACCACAACCACCAAAGAAGACAGAAAAGGACGTAA
CCCTAGTAACAGAAGGCGCCCTCCAAAGCAATCATACCATCCAAGTAACC
AGCATCGCAAACCACCTGAACCTCTCACGGCCCGTGATTATCCTTCACAA
GGCCACAGGGGGTGGATACGCCCAAGCAACAGATAAGAGTCTCTTCGAGA
GAACGGGAAATGTGCAGATAGCGAAGCTATTAGGGGCTGATGTGAGGGTG
TTGGACTCGGCGACTGTTTCAACATCTTCTACAAGTAAAGAAGAAAAGGA
AGAAGAAGAAGAAGAAGACGGAGTCCACTCCATCCTCACGACCCTCCAAA
ATGAAGGCAAAAATCCCTACTGGATCCCCTCAGGAGCAAGTCTCCACCCA
CTAGGTGGATTGGGGTACGCAAGATGCGCATTCGAGATTGCATTGCAGGA
GAAACAACCGCAATCACTGTCACAACCAGAGGGTTCAAACCTCGGCAGAT
TCGACTACATCTTTCTCGCCTGCGGCAGCGGCAGCACCCACGGCGGGCTC
ATCGCCGGTCTGAAACTTCTCGAGAAACAAGAAACCACCACCACCACCAC
CACCACCACCACCACTTCCCTACCGCCCCGGAAAATCATAGGCATCCTCA
CATCCCCGACTCGCTCACGCAGCTACCACGAAAACAGAGTATTACAGTTT
GCGCGACAAGCGGGAAGACTTATCGGGCTTGAAGATGTGGAGAGGGAGAT
AACCATGCAGGATGTGCATATTGATGAGCGGTTTGCGGGCACGGCGTATG
GAGAAGTGGATGATGCGACGAGGGATATGATGCGGTTGATGGCAAGAGAG
GAAGCGGTGTTGTTGGATCCGGTGTATACGGGGAAGGTGGCGAGGGGGAT
GGTGCATTGGGTGAGGGAGGGGGAGATTTCCAGGGATTGGGTTGCGCGAG
GGGGATGGGAAAGGGATGGAGGTAATGTTAAGGTGTTGATGGTACATACG
GGGGGACAGTCTGCTTTGAGTGCGTATGCAGATGTTGTGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006321CBS51388_006321Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006321-T1.exon1CBS51388_006321-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006321-T1.exon2CBS51388_006321-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006321-T1.cdsCBS51388_006321-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006321-T1CBS51388_006321-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_9.8
DBxrefInterPro:IPR001926
DBxrefInterPro:IPR027278
DBxrefInterPro:IPR036052
DBxrefPFAM:PF00291
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1320575..1321987 +
Powered by Drupal